KEGG   Oryzias latipes (Japanese medaka): 101172486
Entry
101172486         CDS       T02443                                 
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
  KO
K04664  growth differentiation factor 5
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04060  Cytokine-cytokine receptor interaction
ola04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    101172486 (gdf5)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    101172486 (gdf5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ola04052]
    101172486 (gdf5)
Cytokines and neuropeptides [BR:ola04052]
 Cytokines
  Transforming growth factors (RSTK binding)
   101172486 (gdf5)
SSDB
Motif
Pfam: TGF_beta
Other DBs
NCBI-GeneID: 101172486
NCBI-ProteinID: XP_004068769
UniProt: A0A3B3I498
LinkDB
Position
5:complement(6118995..6131974)
AA seq 567 aa
MKVVRHLSFLFSCWTLLYPHPVLASRSWTTQKEREHRQLGEARRQTEAREVGQLLKKVPG
AWNPSARIPAGPPPLKGETSVDRNKPSSSRSSVYSSAKHLPKLQDKVDNSARKGVSRSWV
SPTDAHVKVHAPATVNAYAAVKETPTVGGKASAGKKMERVASKASAAAAAARAASPHQTG
GAQRRLPPAAQRSSSSQNPRLQHRQPLVTPHDYMLSLYWSLSSGGLNSSALHEAALANTI
TSVVDRGQDDHGPLLQRQKYYFNISSLELEGLLGAELRILRKPMSDPRMASRGSTAGEGG
GKSQSPYLKLYTCASVKQKCVLLQVKSTEDWFSTLSNKWEVFDINKIFLNLKKQQNHHSQ
QLCFELEALEHRRGRPMDLRTLGFSRLGRTNKEKAFLLAFGRSNKRDLFYNEIKARSGHD
NKTVYEYLFTQRRMRRAPAARGTKRVLELPMPSFTKNQQGKPRQRCHRKHLHVNFKEMGW
DDWIIAPLEYDAFHCSGTCDFPIRSHLEPTNHAIIQTLINSMDPKSTPPTCCVPTRLSPI
SILYIDSANNVVYKQYEDMVVESCGCR
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgaaagttgtgaggcatctttcttttctgttcagctgctggactctcctttacccgcat
cccgtccttgcttcacgcagctggaccacgcaaaaggagcgcgagcatcgccagcttgga
gaggcaagacggcagacagaagcacgcgaagttggtcagttactaaaaaaagttcccggt
gcgtggaatccctccgcgcgcatccccgctggtccgccgccgctcaaaggcgagacttct
gttgatagaaacaaaccgtcctcctcgcggtcatccgtgtactcatccgccaaacatctg
ccgaagctgcaggataaggtggacaactcagcgcgcaaaggggtttcgcgctcctgggtg
tccccaacggacgcgcacgtcaaggtccatgctcccgcaactgttaacgcttacgcagca
gtgaaagaaaccccaactgttgggggtaaagcctcagctggcaagaaaatggagagagtt
gcttcaaaggcaagcgcggctgctgctgctgcacgcgcggcttcccctcaccaaaccggc
ggcgcgcagaggaggctgcctccggcggcgcagcgcagcagcagcagccagaatccgagg
cttcagcacagacaaccgctggtgacccctcacgactacatgctgtcgctgtactggtct
ctatccagcgggggactgaacagcagcgcgctgcacgaggcggctctggccaacaccatc
accagtgtcgtggacagaggtcaagatgaccatgggcccctgctgcaacgtcagaaatat
tacttcaacattagctctttggagctagaggggctccttggggctgagctacgaatcctg
aggaagcctatgtctgacccccgcatggcctcaaggggctctactgctggcgaaggggga
gggaaaagccagtccccttacctgaagctttacacatgtgcttcagtaaaacagaaatgt
gttttgctccaagtgaagagcacggaggactggttcagcacactgagcaacaaatgggaa
gtatttgacatcaataagatcttcctgaacttaaaaaagcagcagaaccatcactcccag
cagctctgctttgagttggaagcactggagcaccgcagaggtcgccccatggaccttcgc
accttaggattttctcgtcttggcagaacaaacaaagaaaaggcctttcttttggctttc
ggcagaagcaacaagcgtgatcttttttacaatgaaataaaagcccgttcaggccacgat
aataaaaccgtctatgagtacctgtttacccagcgacgaatgaggcgagcccctgcagca
agggggacaaagagagttctggaactgcccatgccgtccttcaccaaaaaccagcaaggg
aagcccaggcagcgctgccacagaaaacatctgcatgttaacttcaaagagatgggctgg
gatgactggatcattgccccgctggaatatgacgcctttcactgcagcggtacctgcgac
ttccctatccgctcacacctcgaacccaccaaccacgccatcatccagaccttgattaat
tcaatggacccaaagtccacccctcccacctgctgcgtcccgacacgcctcagccccatc
agcattctctacattgactctgccaataacgttgtgtataaacagtacgaagacatggtg
gtggaatcatgcgggtgcaggtag

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