Oryzias latipes (Japanese medaka): 101172486
Help
Entry
101172486 CDS
T02443
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04060
Cytokine-cytokine receptor interaction
ola04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101172486 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101172486 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
101172486 (gdf5)
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Transforming growth factors (RSTK binding)
101172486 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
101172486
NCBI-ProteinID:
XP_004068769
UniProt:
A0A3B3I498
LinkDB
All DBs
Position
5:complement(6118995..6131974)
Genome browser
AA seq
567 aa
AA seq
DB search
MKVVRHLSFLFSCWTLLYPHPVLASRSWTTQKEREHRQLGEARRQTEAREVGQLLKKVPG
AWNPSARIPAGPPPLKGETSVDRNKPSSSRSSVYSSAKHLPKLQDKVDNSARKGVSRSWV
SPTDAHVKVHAPATVNAYAAVKETPTVGGKASAGKKMERVASKASAAAAAARAASPHQTG
GAQRRLPPAAQRSSSSQNPRLQHRQPLVTPHDYMLSLYWSLSSGGLNSSALHEAALANTI
TSVVDRGQDDHGPLLQRQKYYFNISSLELEGLLGAELRILRKPMSDPRMASRGSTAGEGG
GKSQSPYLKLYTCASVKQKCVLLQVKSTEDWFSTLSNKWEVFDINKIFLNLKKQQNHHSQ
QLCFELEALEHRRGRPMDLRTLGFSRLGRTNKEKAFLLAFGRSNKRDLFYNEIKARSGHD
NKTVYEYLFTQRRMRRAPAARGTKRVLELPMPSFTKNQQGKPRQRCHRKHLHVNFKEMGW
DDWIIAPLEYDAFHCSGTCDFPIRSHLEPTNHAIIQTLINSMDPKSTPPTCCVPTRLSPI
SILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtgaggcatctttcttttctgttcagctgctggactctcctttacccgcat
cccgtccttgcttcacgcagctggaccacgcaaaaggagcgcgagcatcgccagcttgga
gaggcaagacggcagacagaagcacgcgaagttggtcagttactaaaaaaagttcccggt
gcgtggaatccctccgcgcgcatccccgctggtccgccgccgctcaaaggcgagacttct
gttgatagaaacaaaccgtcctcctcgcggtcatccgtgtactcatccgccaaacatctg
ccgaagctgcaggataaggtggacaactcagcgcgcaaaggggtttcgcgctcctgggtg
tccccaacggacgcgcacgtcaaggtccatgctcccgcaactgttaacgcttacgcagca
gtgaaagaaaccccaactgttgggggtaaagcctcagctggcaagaaaatggagagagtt
gcttcaaaggcaagcgcggctgctgctgctgcacgcgcggcttcccctcaccaaaccggc
ggcgcgcagaggaggctgcctccggcggcgcagcgcagcagcagcagccagaatccgagg
cttcagcacagacaaccgctggtgacccctcacgactacatgctgtcgctgtactggtct
ctatccagcgggggactgaacagcagcgcgctgcacgaggcggctctggccaacaccatc
accagtgtcgtggacagaggtcaagatgaccatgggcccctgctgcaacgtcagaaatat
tacttcaacattagctctttggagctagaggggctccttggggctgagctacgaatcctg
aggaagcctatgtctgacccccgcatggcctcaaggggctctactgctggcgaaggggga
gggaaaagccagtccccttacctgaagctttacacatgtgcttcagtaaaacagaaatgt
gttttgctccaagtgaagagcacggaggactggttcagcacactgagcaacaaatgggaa
gtatttgacatcaataagatcttcctgaacttaaaaaagcagcagaaccatcactcccag
cagctctgctttgagttggaagcactggagcaccgcagaggtcgccccatggaccttcgc
accttaggattttctcgtcttggcagaacaaacaaagaaaaggcctttcttttggctttc
ggcagaagcaacaagcgtgatcttttttacaatgaaataaaagcccgttcaggccacgat
aataaaaccgtctatgagtacctgtttacccagcgacgaatgaggcgagcccctgcagca
agggggacaaagagagttctggaactgcccatgccgtccttcaccaaaaaccagcaaggg
aagcccaggcagcgctgccacagaaaacatctgcatgttaacttcaaagagatgggctgg
gatgactggatcattgccccgctggaatatgacgcctttcactgcagcggtacctgcgac
ttccctatccgctcacacctcgaacccaccaaccacgccatcatccagaccttgattaat
tcaatggacccaaagtccacccctcccacctgctgcgtcccgacacgcctcagccccatc
agcattctctacattgactctgccaataacgttgtgtataaacagtacgaagacatggtg
gtggaatcatgcgggtgcaggtag
DBGET
integrated database retrieval system