Oryzias latipes (Japanese medaka): 101172522
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Entry
101172522 CDS
T02443
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101172522 (nop2)
Enzymes [BR:
ola01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
101172522 (nop2)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101172522 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
101172522
NCBI-ProteinID:
XP_004078019
UniProt:
H2M9L3
LinkDB
All DBs
Position
16:20210824..20220552
Genome browser
AA seq
758 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKARKQKGAEVELAKFITDEDTGPKRLSSRARKRAAKRADNSKN
LKEVPKKQPKKGFTDENSKWLKPTKRKRKADEAGSEDDSEELWEESDGDEYEEEKVQLQQ
KGSKGPAKTEIKEVEGDEDDKDDSDEDMVDDYGALDDGSEDEAQEEDSDAEDLLPIERAA
KKEKKQKKLMDLGSEDDDDDDDDEEEEEEEDDGDEKDEQQDEDMDEDGTLETNTDEVDRF
RLPDPEESEKEGMLSLDLKTIHQRIKDNVDVLCNFSAKREEGKARGDYVSLLKKDLCTYY
SYNSFLIDKLMELFPLSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPI
GKWSKVGLVIYDSSVPVGATPEYLAGHYMLQGASSFLPVMALSPQEGEMVLDMSSAPGGK
TTYIAQLMRNTGVIVANDANSERLKSVVGNIHRLGVTNTVVCNYDGRQFPKVMGGFDRVL
LDAPCSGTGVIAKDPAVKTSKDEADILRSAHLQKELILSAIDSVNAESPSGGYVVYCTCS
ITVEENEWVVDYALKKRNVKLVPTGLDFGKEGFTNFKQFRFHPSLKLTRRFYPHSHNMDG
FFVAKLKKFSNVVPTVPAEKEEEKTDTTEATASPSAPKDLLSKNDKKKSQMEKRDASKPK
TKPNGTTFKPTEENRSKSGPKKAKIAKMDGEGVKAAGVKKPTVKADVKNEAPKSDKNEGS
RFEKKQAKKRKKPTILKKRLGKNKFQKLKTMLKKHERE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagttggatcccaccaacaaagtgaagagaggacctggtaagaaagccagg
aagcagaagggggcagaggttgaactcgcaaagtttattactgatgaggatactggacca
aagcgtttgtcaagcagagccaggaaacgagctgcaaagagagcagacaattccaaaaat
ctcaaggaagttccaaaaaaacagcccaaaaaaggttttacagatgaaaacagtaagtgg
ttgaaacctacaaagagaaagcgtaaggccgatgaggcgggaagtgaagacgacagcgag
gaactctgggaagaaagtgatggtgatgaatatgaggaggagaaagttcagcttcagcag
aagggaagcaaaggccctgcaaaaacagaaataaaagaagtagagggagacgaggatgat
aaagatgacagtgacgaagacatggttgatgactatggggctctggatgatgggagtgaa
gatgaagcacaggaagaggacagcgatgcagaggatcttcttccaattgaacgtgcagcc
aaaaaggagaaaaagcaaaagaaattaatggaccttgggagtgaagatgatgatgacgat
gatgatgatgaagaagaggaggaggaggaagatgatggggacgaaaaagatgaacagcaa
gacgaagacatggatgaggacggcaccttagaaaccaacacagatgaggtggacagattc
cggctgccggatccagaggagagtgaaaaagagggaatgctgtctctggacctgaagacc
atccatcagagaataaaggacaacgtggatgttctctgtaacttctcagcaaaaagggag
gagggcaaagcccgaggagactatgtctctctcctcaagaaagatctctgcacctattac
agctacaacagcttcctcatcgacaaactgatggaactctttcctctctctgagctggtt
gatttccttgaagccaatgaaattcagagacctgtcacaattcggaccaacacgctgaaa
acacgaaggcgggaccttgcacaggctttgattaacagaggggttaaccttgatccaatt
gggaaatggtctaaagttggactggttatctatgactcatctgttccagttggtgcgacc
cctgagtatctggctggtcactacatgctgcagggagcctccagctttctgcctgtcatg
gctctttctccacaggaaggagagatggtgctggacatgagttcagctccaggaggcaag
accacctacatagcccagcttatgagaaacacaggagttattgttgcaaacgatgccaac
tctgaaagactgaagagcgtggtgggaaatattcatcgtttgggggtcaccaacaccgtt
gtctgcaactatgatggcaggcagttcccaaaggtaatgggcgggtttgatcgagttctg
cttgacgcaccctgctcgggaaccggagtcattgccaaagatccagctgtaaagaccagc
aaggatgaggcggatatcctgcgctcggctcacttgcagaaagagctcattctctctgct
attgattctgtcaatgctgagtcaccttcaggaggatacgtggtctactgcacatgctca
ataacggtagaggagaacgagtgggtggtggactacgctctgaagaaaaggaatgtgaaa
ttagttcccaccggactcgactttggcaaagaaggcttcaccaatttcaaacagtttcga
ttccatccctctctgaaactcacgcggagattttacccgcactcccacaacatggatgga
ttttttgtagccaagctgaagaagttctccaatgtggttccaactgtgcctgcagagaaa
gaagaagagaaaacggacaccacagaggctacggcatctccgtctgctcctaaagatctt
ctgtccaaaaatgacaagaagaagagccaaatggaaaagagagatgcatcaaaaccaaaa
accaaacccaatggaacaacattcaagccaacagaagaaaacagatcaaagtccggcccc
aaaaaagcaaagattgctaaaatggatggagagggtgtgaaggcagccggagttaagaag
cctacagtgaaggccgacgtcaagaacgaagcccccaaatctgacaaaaacgaagggagt
cgatttgagaaaaagcaggccaagaaaagaaaaaaaccaacaattctcaagaaaagattg
gggaaaaacaaattccaaaaactcaagaccatgttgaaaaaacacgaaagagagtga
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