Oryzias latipes (Japanese medaka): 101172579
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Entry
101172579 CDS
T02443
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101172579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101172579
03036 Chromosome and associated proteins [BR:
ola03036
]
101172579
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
101172579
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
101172579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
Glyco_hydro_2_N
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
101172579
NCBI-ProteinID:
XP_011475158
LinkDB
All DBs
Position
7:complement(7361448..7381892)
Genome browser
AA seq
845 aa
AA seq
DB search
MSTKVNMEARCKEPDCTAIDPSSSSATETILICGGDSSVKKSRPQPHTTTALLLPAPSHQ
KVELTPTVAVGNAGKGSRANDMAKTALTAQMGTACSIVHVLEWKEGMAILPSSNLKFCVS
DVGTLSTLITPGTTGGPTDPAVGSSGRSNNAENPPDKPVLTSVPEVSAPVGALRAEAVEP
QRLVSVKPDVLGGPGTLNHNPRAQKLPTEELRRDPIPDKRSVSIEKVPAGGKVTSLNPDH
LKAMRKRKRKEYLSPSEEDSDMEGTNEKMDDGKMDSRHIRGGGDSKTEEWTWAQYLEETK
AVAAPSKLFQETQRVPTVKNGFKQGMKLEGIDPQHPSMYFVLTVAEVCGYRLRLHFDGYS
DCHDFWVNANSLDIHPAGWCESTGHKLHTPKGCKEEEFTWTNYLKMTKAQVAPKELFSSP
GRIDVNCGFEIGMKLEAVDRMNPSLICVATVTDAVDNRFLVHFDNWDDTYDYWCDASSPY
IHPIGWCQERNLPLTPPQDYPDQGRFSWCLYLEETGAKAVAAEVFKVRAPHSFQPQMKLE
AVDKRSPGLIRVATVEEVETHRIKIHYDGWSHVYDEWMDSDHPDIHPAGWCEATGHPLKV
PPRDNKTQQPQGVREFPATGQSSYPSSVSCKPISHQRTSKYSFHNRKCPTPGCDGSGHVT
GRFTAHHCISGCPLAERNQGRLKAELSDSECKRNLFFGQRSKKNHYRGRYRIGRPPKYRK
DQQREYQSMSSEGVYSSLFMSALSGQSDRALSLCWEQHCKLLPGVQGIHASQVAAWSVEE
VFRFVQNLIGCEEQARLFKEEMIDGEAFLLLTQTDIVKIMSIKLGPALKISNAILMFKTT
DEGLK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaaagtgaacatggaggctcgatgcaaagaacccgactgcaccgccatcgac
ccttcgtcgtcctctgccactgagaccatcctcatatgcggcggtgacagctcagtcaaa
aagagccgacctcagccccacaccaccacggctctcctcctgccggctcccagtcatcag
aaagttgagttgacccccactgttgcagtgggaaacgcaggcaaaggcagcagggccaac
gacatggctaaaaccgctctaacagctcagatgggcacggcttgcagcatcgtacacgtc
ctcgagtggaaggaagggatggccattctgcccagtagtaatctgaagttttgtgttagt
gacgtaggaactctgagcacacttataaccccaggaaccaccggcggtcccactgaccct
gcagtgggttcttcaggaagatccaacaatgctgaaaaccctccagacaagccagtgttg
acgtcggtaccagaggtctctgcaccagtcggcgctttgagagccgaagcagtggagcca
cagcggttggtgtcagtcaagcctgatgtcctgggtggaccagggacactaaaccacaac
cccagagctcagaaactgcccacagaggagctacgcagggacccgatccctgacaagaga
agcgtcagcatcgagaaggttccagcagggggaaaagtcacgtctcttaacccagaccac
ctaaaagccatgaggaagaggaagaggaaggaatacctgagtccatctgaggaagactcc
gacatggaaggcacaaatgaaaagatggatgacggtaaaatggacagtcgacacatcaga
ggaggaggggacagtaaaacagaagagtggacatgggctcagtatctggaggaaaccaaa
gctgtcgctgctccgagcaagctcttccaagagacgcagagggtgcctacagtgaagaac
ggttttaagcagggaatgaagctggaaggcatcgatccgcagcatccctccatgtacttc
gtcctcactgttgccgaggtctgtggttaccggctgcggctgcattttgacggctactct
gactgtcatgacttctgggtgaacgccaactccctggacatccatcctgctggctggtgt
gagagcacaggacacaaactgcacacgcccaaaggatgtaaagaagaagagtttacttgg
accaactacctgaaaatgactaaagctcaagtggctcctaaagagctgttttccagtcct
ggcagaattgatgtgaattgtggctttgagattggaatgaagctggaggcggttgaccgc
atgaacccttccctcatctgtgtagcaacggtcaccgacgccgtggacaaccgcttcctg
gttcattttgacaactgggatgacacatacgactactggtgtgatgccagtagtccatac
attcatcccattggttggtgccaagagaggaacctcccccttacgccgccccaagactat
ccagaccaaggtcggttttcctggtgtctgtatctggaggagacgggtgccaaagctgta
gctgcagaggtctttaaagtgagagcacctcacagctttcagcctcagatgaaacttgag
gctgtggacaagaggagcccgggtctgataagagtggccacagtggaggaagttgagacg
catcgcattaagatccattatgatggctggagtcatgtctacgacgaatggatggactcg
gatcacccggacattcatcccgccggctggtgcgaagcgactggtcaccctctgaaagtt
cctccgcgggacaacaaaacgcagcaacctcaaggtgtgagggaatttccagctacaggc
cagtccagctacccttcctctgtttcctgtaaacctatcagccaccagagaacaagcaag
tacagcttccacaacaggaagtgtccaactcccggctgtgatggttcaggtcatgtgacc
ggtcgtttcaccgcccatcactgcatttccggctgcccgttggccgagcgcaaccagggc
cggctgaaggccgagctgtcggactcggagtgcaagagaaacctcttctttggccagagg
agcaagaaaaatcattaccgtggcaggtacaggattggtcgtcccccaaaatacagaaag
gaccaacaaagagagtatcagagtatgtcttcagagggagtttattcatcgctgttcatg
tccgctctgagcggccagtcggaccgcgctctgtctctgtgctgggagcaacactgtaag
cttctgccgggtgttcagggcatccatgccagccaggtggcagcatggagtgtcgaggag
gtcttcaggtttgtccagaatctgataggctgtgaagagcaagctcgtctcttcaaagaa
gagatgatcgacggagaagcgttcctgctgctgactcagaccgacattgtgaagatcatg
agcatcaaactaggccccgccctcaagatttccaacgccatcctgatgtttaagaccacg
gatgagggactaaagtga
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