Oryzias latipes (Japanese medaka): 101172642
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Entry
101172642 CDS
T02443
Symbol
usp8
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04137
Mitophagy - animal
ola04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101172642 (usp8)
04137 Mitophagy - animal
101172642 (usp8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101172642 (usp8)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101172642 (usp8)
04121 Ubiquitin system [BR:
ola04121
]
101172642 (usp8)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101172642 (usp8)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101172642 (usp8)
Membrane trafficking [BR:
ola04131
]
Endosome - Lysosome transport
Others
Others
101172642 (usp8)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101172642 (usp8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP8_dimer
WW_USP8
UCH_1
Rhodanese
Motif
Other DBs
NCBI-GeneID:
101172642
NCBI-ProteinID:
XP_011486858
UniProt:
H2LDA8
LinkDB
All DBs
Position
3:complement(13662398..13674680)
Genome browser
AA seq
1078 aa
AA seq
DB search
MPAVSTEVKELYLSTSLGELNKKAEIKPDKTSTRSYVQSACKLFKAAEECRLDRDEEKAY
VLYMKYLTVYDIIKKRPDFKQQPEYYITLLGQNSFKKAIEEAEKLSESLKLRYEEAEVRK
KLEEKERLEEKKKREDIEKKKDVGSPKASAANKKDSKKVRGEQNELKSVITKVVQPAGGI
TAEKLFQMMKDQTISMVVMDARSLKDYEESHIQVPAQTCISVPEEAISPGITVNQIEAKL
PSMSKDHWMKRGFVDYIILLDWFSSVSDLKLGTTLQSLKDALFKWDSMTILRSEPLVLEG
GYENWLLFYPMYTTNAKVQPPRETMVNTLPQLNFSYPSLEEPKPPVVHPEPVVQPDTQKP
PAPAVANGVAPAEPPTSKTSVIADKLPDTHDSPVRSPASTGLDLNKKSPAPNQSPATAKA
FPQFDRTKKPVRDEPKPKEDGSTKDSTQNGPVVPDRSVKPPLIPSTSLSKEEQNQIHLEA
VAVMEKAKQEQEKRMQERRLEEEKREKELKDRLEREESERRSKQEEEKRHLERKRLERQK
AEEEEDKENKTWDERERRGKEPNADTPSKSMSLDSPVPNHLVSEIKREPLTRARSEEMGR
TVPGLPDGWMKFLDTVTGTYRYYHSPTNRVHLYPPEVTVPQTPPSTPPTVKQKPPQPAEP
DTSHEREQEQSKLKRSYSSPDISQDLREEAQKKATAPPTPAVIPTINRDTKPVTAKVYSK
VEIARPSAAKIRSLNPTFGGMGASLTGLRNLGNTCYMNSILQCLCNTPAMAEYFNSNYYL
EDINRSNILGHKGEFAEEFGVIMKALWAGLYKCISPRDFKITIGKINDQFAGYDQQDSQE
LLLFLMDGLHEDLNKADNKKRYKEEENDHLDDQTAADLAWSKHKLLNESIIVALFQGQFK
STVQCSTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKAH
RDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTTVDFPLDNLDLTQYVIGPKQTLKRY
YLYGVSNHYGGLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFYSTL
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagtgtccacagaggtgaaggagctgtatttatccacatctctgggcgaactc
aacaaaaaagcggaaatcaagcccgacaagaccagcaccaggagttatgttcagagtgcc
tgcaagctcttcaaggcagcagaggaatgccgtttggacagagatgaggagaaagcgtat
gtcctttacatgaaatatcttacggtatatgacatcattaagaaaaggccagacttcaag
cagcaaccggagtattatattactctgctcggtcaaaacagcttcaagaaagccatagaa
gaagcagaaaagctctctgaaagccttaaacttaggtatgaagaagctgaggttcgaaaa
aagcttgaggagaaggagcgattagaagaaaagaagaaaagagaggacattgagaagaaa
aaagatgtgggctctccaaaagcatcagctgcaaacaagaaggacagtaaaaaggtgaga
ggtgagcagaatgagctgaagagtgtgatcacaaaagttgtacaaccagctggtggtatt
acagccgagaagctttttcaaatgatgaaagaccaaacgatctccatggtcgtcatggac
gcccgaagcctcaaggactacgaagagtcccacattcaagtcccagcccagacctgcatc
agtgtgcctgaggaggccattagtccaggaatcactgtgaatcagattgaggcaaagctg
ccaagcatgtccaaggatcactggatgaaacgtgggtttgtggactacatcatcttgctg
gactggttcagttccgtctctgacctcaaactgggcaccactttgcagagcctcaaggat
gctctctttaagtgggacagcatgaccattctgcgaagtgagccacttgttctagaaggg
ggctatgagaactggctgttgttttatcccatgtacacgaccaatgccaaagttcaaccc
cccagagagaccatggtcaatactctccctcagttgaactttagctacccatccttagag
gagccaaagcctcccgtggttcatcctgagcctgtggtccaacccgacacccagaagccg
ccagctccagcagtggccaatggggttgcacctgcagagcctcccacatccaaaacctcc
gttattgctgacaaattgccagacacacacgactccccagtaagaagccccgcaagtact
gggttggatctaaataagaagagccctgcacccaaccaatcccctgcgacagccaaagca
ttccctcagtttgaccgaaccaaaaaacccgtgcgagatgaacctaagcccaaggaggat
gggtccacgaaagactcgacgcagaatggacctgttgtccctgaccgttcagtgaagccg
ccgctcattcccagcacatctctgtccaaagaggaacaaaaccagatacacctagaagct
gtggcggtgatggagaaggccaagcaagagcaggagaaacgcatgcaggagcgccgccta
gaagaggagaagcgagagaaagaactaaaggacaggctggaaagagaggaaagtgagagg
aggagcaaacaagaagaggagaagaggcatctggagaggaagagacttgaaagacaaaag
gcagaggaagaggaagacaaagagaacaagacatgggatgagagggagaggagggggaag
gagcccaatgctgacactccctcaaaaagcatgtctctggattcacctgttcctaaccat
cttgttagtgagataaagagggaacctttaaccagagctagaagtgaggagatgggcagg
acagttccaggcctacctgacggctggatgaagttccttgacacagtgaccgggacatac
agatactaccattccccaactaatcgggtccacctgtacccccctgaggtcacggtgcct
caaacgccaccttccactccacccacagtcaaacagaagccgccacaaccagctgagccg
gacaccagccacgagagggaacaggagcagtccaaactgaagcgctcctattcctcccca
gacatcagccaggatctgagggaggaggcccagaaaaaggccaccgccccacccactcct
gctgtcatacccactatcaacagagacaccaagccggtcactgcaaaagtgtactctaaa
gtagagatcgcacggccatcagcagccaaaattcgcagcttgaatcctactttcggaggg
atgggtgcgtcacttactggcctccgtaaccttggcaacacctgctacatgaactccatc
ttgcagtgtctttgcaacactcctgccatggctgagtacttcaatagcaattactatctg
gaggatattaacagatccaacattcttgggcacaaaggggagtttgcagaggagtttggt
gtgattatgaaagccctgtgggctggtttgtacaagtgcatcagtccacgtgacttcaag
atcaccattggcaagatcaatgaccagtttgctggctatgaccaacaagactcccaagag
ttgctgctgttcctcatggatggccttcatgaagacctaaacaaggcggacaataagaaa
cgatacaaagaggaggaaaacgaccatctggatgaccagaccgcagctgacctggcctgg
agcaaacacaaactcctcaacgagtccatcattgtagccctgttccagggccagttcaag
tctacagtgcagtgttccacctgccatcgcaagtcacggacgtttgagactttcatgtac
ctgtcgctgcccctggcttccaccagcaagtgctccctgcaggactgtctgaggttattc
tccaaagaggaaaaactgaccgacaacaacaaagtgttctgcagacactgcaaagcccac
agagattcaaccaagaaactggagatttggaaggttccacccatcctcctggtgcactta
aaacggttttcctatgaaggaagatggaagcagaaactgcagactacagtggacttccct
ctagataatctggacctgacccagtatgttattggacccaaacaaaccctcaaaagatac
tatctttatggagtttctaatcactacggtggcttggatggtggacattacactgcctac
tgtaagaacgccacgaagcagcgctggtacaaattcgatgaccatgaggtgtctgagatc
tccacctcctccgtcaagtcctctgcggcttacatcctcttttactccaccttgtga
DBGET
integrated database retrieval system
