Oryzias latipes (Japanese medaka): 101172650
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Entry
101172650 CDS
T02443
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101172650
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101172650
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101172650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_6
CorA
zf-RING_5
KxDL
zf-RING_10
Phasin
Spc24
U-box
Fib_alpha
AAA_13
Snapin_Pallidin
TBCA
zf-Nse
DUF4795
DUF1664
Motif
Other DBs
NCBI-GeneID:
101172650
NCBI-ProteinID:
XP_004068683
UniProt:
A0A3P9I552
A0A3B3I9K2
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All DBs
Position
5:complement(8634452..8673557)
Genome browser
AA seq
475 aa
AA seq
DB search
MASCLKDELLCSICLSIYQDPVSFGCEHYFCRKCITEHWSRQEPHGARDCPECRRTFADP
LLSPSLKLSNIVERYSAFPLDAILNAQRSNYPCKDHEKVKLFCLTDKNLVCFFCDEPALH
EQHQVTTIDEAYEEIQREMKEQLATLQDSERGHTEALKLLQRQLTETKSSAKSLRATIGD
AFERLHRFLRERQKSMLEELEMDTARKLSDIEHKIQRYSQQLRDVKEGIQILQERLSETG
RHDFLEGVAVTSERMKGKIHETNLTYEDFPTSKYMGPLQYTIWKSLFLDISPVPAALTLD
PITAHQRLILSDDCTIVAYGNLHPQPLQDSPRRFDVEVSVLGAEGFSSGVHYWEVMVSEK
TQWMIGVANETVSRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVKSKLEKVGVFL
DYPKGLLIFYNADDMSWLYTYREKFSTKVFPYFSPGQSHANGKNVQPLRVNTVRL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctagttgcctgaaggacgagctgctctgttctatctgcctcagcatctaccaggat
cccgtcagcttcggttgcgagcactacttctgcaggaagtgcatcacggagcactggagc
cgccaggagccgcacggagcacgggattgccccgagtgcagaaggactttcgccgatccg
cttctttcgcccagcctcaagttgtccaatattgtcgagcgctattccgccttccctctt
gatgccattctgaatgctcagaggagcaattacccctgcaaggaccacgagaaggtcaag
ctcttctgcctgactgacaaaaacctggtgtgcttcttctgtgacgagcccgcgttgcac
gagcagcaccaagtgaccaccattgacgaggcctacgaggagatccagagggagatgaag
gagcagctggccacgctgcaggacagcgagcggggacacaccgaagccctgaagcttctg
cagagacagctcactgagaccaagtcctcggccaagagtttgcgcgcgaccatcggggat
gctttcgagcgtctccatcgtttcctgcgagagcgtcaaaagagcatgctggaggagctg
gagatggacacggcccgcaaactgtcagacatcgagcacaagatccagcgctacagtcag
cagctgcgcgacgtcaaggagggcatccagatcctgcaggagcgcctcagcgagaccggc
cgtcacgacttcttggagggtgtagcggttacatcagagaggatgaaaggaaagattcac
gagaccaatctgacatatgaggacttccctacttctaagtacatggggccattgcagtac
acaatatggaaatcccttttcctggacatttcaccagtgccagctgcattgaccctcgac
cccatcacagcccaccaaagattgatcctctcggacgactgcaccattgtggcgtacggg
aacctccacccgcagcctctgcaggactccccgcgccgctttgatgtggaggtgtccgtg
ctgggagcagagggcttctcgtcaggcgtgcattactgggaggtgatggtatcggagaag
acgcagtggatgatcggcgtggccaacgagacggtcagccgcaaaggcagcatccagatc
cagcccagccgcggcttttactgcatcgttatgcacgatgggaatcagtacagcgcctgc
accgagccctggacccgcctcaacgtcaagagcaagctggagaaggtgggggttttcctg
gactaccccaaaggtctgctcattttctataacgcagacgacatgtcctggctctacacc
taccgggagaaattctccaccaaggtcttcccttacttcagccccggccagagtcacgcc
aatggcaagaatgtgcaaccactccgcgtcaacaccgtccgtctttaa
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