Oryzias latipes (Japanese medaka): 101172726
Help
Entry
101172726 CDS
T02443
Symbol
rbm15b
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101172726 (rbm15b)
03041 Spliceosome [BR:
ola03041
]
101172726 (rbm15b)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
101172726 (rbm15b)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101172726 (rbm15b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
101172726
NCBI-ProteinID:
XP_020558753
UniProt:
A0A3B3HUA9
LinkDB
All DBs
Position
5:6228706..6232526
Genome browser
AA seq
830 aa
AA seq
DB search
MKRQAVRDGSPSRALAKRIRERERESARREELPPPPPLALLLAESRSYHRRSRSREREKP
RLREERAAALELHHRHELSLLGRPPLRAAELPAARPGTLEYKTLLISNLGSQVSDEDVED
ALFHEFKKFGDVSVKLSHTPELGRIAYVNFRQPEDAKEARHAKSSRLALGDRQLKIEPMY
VRRRSVTPPDVSYLPLHAPYPYRQRSLSPPGTGVSSMRDLRARHFALESLGLSRDRERLL
DYYGMLDERGRPYAFPPMPVVEDLKPEDDQRATSNLFIGNLDGNVTEAELRRGFDKYGII
EDVVIKRPARGQGGAYAFVKFQNLDMAHRAKVAMQGRLIGGNPIKIGYGKANPTTRLWVG
GLGPGNSLTALAREFDRFGSIRNIDYVKGDSFAYIQYESLDAAQAACTQMRGFPLGGPER
RLRVDFAKVEESPSRPFPPGYQLPVPPPTHYDLLGEAYSRHRSLERELRGTRERSSPPSH
SLLSLRERVLLEREFPSSPTRSLDRRVGGVEAFGRAGRGARSRSRSRERWLKEREERRSR
RRSRSLSVDKQSEEKEKEKGRSRVRVPGGTASPDASPDRARVRAPDSTTEPRDHSPDSGG
GGRHANATEEEPPSSRHHSKRSASVNNHHRNSDVAAASPPAAHTDTSSTLSSLSEYAQGS
LTKVWQGFFALKNSSFPTELYMLEGGASFLSGVLKDSLNLQNRNQPSQLKIAQRLRMDQT
RLDEVSRRIKLGRPDGFAILLALQGAIDRQAPAPEPGLQIRLLRHLVTYLRNKEAAGVVG
LPATKEGGTGGMLYAFPPGEFSQQFLQAARRTVGNLDEEHMVIVIVSDTN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcaggccgtgagagacggcagcccatccagggccctagccaagcggattcga
gagagagaacgggagagcgcccgcagagaggagctgccgccgccgccgccgctggctctg
ctgctggcggagagccggagctaccaccggcggagccgcagcagggagcgggagaagccg
cgccttcgggaggagcgcgcggccgcgctggagctccaccaccgacacgagctcagcctc
ctgggccggccgccgctgcgggccgcggagctccccgccgcgagacccggcacgctggag
tacaaaacgctgctcatcagcaacctgggctcgcaggtgtcggacgaggacgtcgaggac
gcgctgttccacgaattcaaaaagttcggggacgtgagcgtgaagctgtcgcacacgccg
gagctcggccgcatcgcctacgtcaatttcagacagccggaggacgccaaggaggcccgg
cacgccaagtcctcccggctggctctgggtgatagacagctcaaaatagagcccatgtac
gttaggaggcggagcgtcacccccccggacgtcagctatctacctttacacgccccctat
ccgtacagacagcgctccttgtccccacccgggaccggcgtgagcagcatgcgggacctc
cgggccagacactttgcgctggagagcctgggtctgagcagagaccgggaaaggctgctg
gactattatggtatgctggatgagagggggcggccctacgcgttcccccccatgcctgta
gtggaggacctgaagcccgaggatgaccagagggccaccagcaacctgttcatcggaaac
ctggacgggaatgtgacggaggctgaactcaggagagggtttgataaatacggcatcatt
gaggacgtggtcatcaaacggccagcacgcggccagggcggggcttatgcctttgtaaag
tttcagaaccttgacatggcccacagggccaaagtggccatgcagggccgtcttattggt
ggaaacccaattaaaatcggatacggcaaagccaaccccaccacccgactgtgggtgggc
ggtctgggaccaggaaactcgctgaccgctctggcgcgggaatttgaccgctttggaagc
attaggaacattgactatgtgaagggcgacagctttgcttacatccagtatgaaagtttg
gatgcagcccaggccgcctgtacccagatgaggggctttcctctgggcgggccagagcgc
cgcctcagggtggactttgctaaagtggaggagagcccctcccgcccatttccccctggt
taccagcttcctgtgcctccccccacgcattatgacctccttggagaggcctacagtcgc
catcgcagcctggagcgcgagctgagaggaaccagggagcgctcctcaccgccctcccac
agcctcctctctttgagagagagggtcctgctggagagagagtttcccagcagccccacc
cgaagcctggacaggagggtgggaggagtggaggcgtttggaagagctggccgaggggcg
aggagccgcagcaggagcagggaacgctggctgaaggagagggaggagaggaggagccgc
aggagaagcagaagtctgtctgtcgacaagcagtcggaggaaaaggagaaagaaaaggga
aggtcgagggttcgagttccgggaggcaccgcctcccctgatgcaagcccagaccgagca
cgggttcgagccccggactccaccactgagccaagagaccactcccctgacagtggtgga
ggggggcgacacgcaaatgccacagaggaagagcccccatccagccgtcaccacagcaag
aggtccgcgagcgtcaacaaccaccatcgaaacagcgacgtggccgccgccagccccccc
gctgcccacacggacacctcgtccaccctgagctcgctgtcggagtacgcccagggctcc
ctcaccaaggtgtggcagggcttctttgccttgaagaacagcagcttccccacggagctg
tacatgctggagggaggggcctccttcctgagcggcgttttgaaggacagcctgaatctg
cagaaccggaaccagccaagccagttgaaaattgcccagcgcctgcgcatggaccagacc
cggctggacgaggtgtcgcgccgcatcaagctcggccgccctgacggctttgccatcctg
ctggctctgcagggcgccatcgaccgccaggcccccgcccctgagccgggactgcagata
cgtctgctccggcacctggtgacatacctgcgcaacaaagaggcggcgggggtggttggt
ctgcctgccaccaaagaggggggcacgggtgggatgctgtacgccttcccccccggtgag
ttctcacagcagttcctgcaggctgcccggaggactgtgggtaatctggacgaggagcac
atggtcattgtgatcgtcagcgacactaattga
DBGET
integrated database retrieval system
