Oryzias latipes (Japanese medaka): 101172748
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Entry
101172748 CDS
T02443
Name
(RefSeq) tropomyosin beta chain isoform X1
KO
K10374
tropomyosin 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04260
Cardiac muscle contraction
ola04261
Adrenergic signaling in cardiomyocytes
ola04814
Motor proteins
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101172748
04820 Cytoskeleton in muscle cells
101172748
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
101172748
04261 Adrenergic signaling in cardiomyocytes
101172748
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101172748
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
101172748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
PUMA_CC
Laminin_I
ATG16
XhlA
ERM_helical
Crescentin
SlyX
CENP-F_leu_zip
DUF1664
DUF3450
Nuf2_DHR10-like
MscS_porin
GAS
FPP
Lebercilin
DUF745
TMF_DNA_bd
DUF16
Fib_alpha
DUF6317
DUF5917
Fez1
Cnn_1N
CCDC22_CC
Motif
Other DBs
NCBI-GeneID:
101172748
NCBI-ProteinID:
XP_004075092
UniProt:
H2MCV5
LinkDB
All DBs
Position
12:24872176..24899704
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AA seq
284 aa
AA seq
DB search
MEAIKKKMQMLKLDKENAIDRAEQAEVDKKGAEDKCKQLEEELLGLQKKLKGVEDELDKY
SESLKDAQEKLEQAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERSE
ERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTEKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYSQKLKGKALSEELDLALNDMTTL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgcagatgctgaagctggataaggagaacgccatcgac
cgcgcggagcaggctgaggtggacaagaagggagcagaggacaagtgcaagcagctggag
gaggagctgctgggcctgcagaagaagctcaaaggggttgaagacgagctggacaaatac
tcagagtctttgaaggatgcccaggagaagctggagcaagccgagaaaaaagcagcagac
gctgaggctgaagtggcgtccctgaacaggcgcatccagctggttgaggaggaactggac
cgagcccaggagagactggccaccgctctgcagaagctggaggaggcggaaaaagctgcc
gatgaaagcgagagagggatgaaggtcattgagaacagagcaacaaaagatgaggagaag
atggagatccaggaaatgcagctgaaggaggccaaacacatcgctgaggaagccgaccgc
aaatatgaggaggtcgcacgtaaactggtgattctggagggagatctggagcgctcagag
gagagggcagaggtggccgaggctaaatcaggtgacctcgaggaagaattgaaaaatgtc
accaacaacttgaagtcactggaagcccaggcagaaaagtattcccaaaaggaggacaaa
tatgaggaggaaattaaagttctcactgaaaagttaaaggaggctgagacccgcgcagag
tttgctgaacgatccgtggccaagttggaaaagaccattgatgatctggaagatgaagtg
tattctcagaagctgaagggcaaggctctgagtgaggagctggacttggccctcaacgac
atgacaacactgtag
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