Oryzias latipes (Japanese medaka): 101172754
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Entry
101172754 CDS
T02443
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101172754 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101172754 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101172754 (vps36)
Membrane trafficking [BR:
ola04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
101172754 (vps36)
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101172754 (vps36)
Exosomal proteins of colorectal cancer cells
101172754 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
MA3
TssO
Motif
Other DBs
NCBI-GeneID:
101172754
NCBI-ProteinID:
XP_004076270
UniProt:
A0A3B3HGP9
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All DBs
Position
14:complement(11464926..11471042)
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AA seq
382 aa
AA seq
DB search
MDRFSWTNGLLEINETLVIQQRGVRLYDGDDKAKMDVGVALLSTHRLIWRDNKNHECCIA
MPLSQILFFEEQAGGIGKSAKIVIHLHPTPPNKEPGPYQQSKYSYIKLSFKEHGQIEFYR
RLTEEMTKRRWENTPVSQPIPTGTGLQAGRTRAVGIVGIERKIEEKRKETDKNISEAFED
LSKLMVKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIADPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacagattttcgtggacaaatgggctactggaaataaatgagactttagttattcag
caaagaggagtaagattgtatgacggtgatgacaaggctaaaatggatgttggagttgcc
ctgttgagcacacaccggttgatctggagggacaataagaaccacgaatgttgcatagcc
atgcctttgtctcagatccttttctttgaggagcaggctggaggaataggaaagagtgca
aaaatagttatccatctgcacccaacacctcccaacaaggagcccggtccttatcagcag
agtaaatactcctatataaagctgtccttcaaggaacatggacagattgagttttacaga
agactaacagaggagatgaccaagagaaggtgggagaatacgcctgtttcacagcccatt
cctacaggtactggacttcaggcaggaaggacgcgtgcagtggggatcgttggaattgag
cgtaagatcgaggagaaaaggaaagaaacggacaaaaacatttccgaggcctttgaagac
ctcagtaagttgatggtgaaggctaaagaaatggtggagctgtccaaatctattgccaac
aagatcaaagaaaaacagggagacataacagaggatgaaacaatacgctttaagtcctac
ctcctgagcatgggcattgcagacccggttaccagggaaacgcacggttcaggcacgcat
tatcatatgcagcttgccaaacagctgggagatatgcttcaggctcctttagaggagcgt
ggcgggatgatggctctcacagaggtgtactgtctcgtcaacagagcaagagggatggag
cttttatcccctgaagatctagtaaatgcatgcaaaatgtttgagtccctgaagctccct
ctgaggttgcgtgtgtttgacagtggtgtcatggtggtccagctgcagtctcacagtgaa
gaggaaatgatagcctcagctttggataatgtttctgataaaggctcattgacagcggag
gagtttgcaaagctcttggggctttctgttcttctatccaaagagcggttgctgcttgct
gaaaagatgggccatctttgtagagatgactctgttgaggggctgagattctacccaaac
cttttttga
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