Oryzias latipes (Japanese medaka): 101172784
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Entry
101172784 CDS
T02443
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101172784 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101172784 (tbpl1)
03021 Transcription machinery [BR:
ola03021
]
101172784 (tbpl1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
101172784 (tbpl1)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101172784 (tbpl1)
RNA polymerase III system
TFIIIB
101172784 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
101172784 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
ERMP1_C
UVSSA_N
Motif
Other DBs
NCBI-GeneID:
101172784
NCBI-ProteinID:
XP_004083749
UniProt:
A0A3B3HP19
LinkDB
All DBs
Position
24:14177462..14184233
Genome browser
AA seq
187 aa
AA seq
DB search
MDSSNDEAVDIIITNVVATFRTRCHLNLRTIALEGINVIYKPEVGKVLMKLRKPRITASI
WSSGKIICTGATSEDEAKLGARRLARCLQKLGFKVRFSAFKVVNVLAVCSMPFSIHLVDF
TKNNRPIASYEPELHPAATYRIKNIKATVQVFSTGSLTITGPNVQNVATAVEQVYPLLFE
CRKPLCK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggattccagcaacgatgaggcagtcgacatcattatcactaatgttgttgcgacgttt
cggaccagatgtcaccttaatctgcgtacaatcgctctagagggaatcaatgtcatctac
aagccggaagtagggaaagtcttgatgaaacttcggaaaccaaggataacagcctcaatc
tggtcatcaggaaagatcatctgcactggagcaacaagtgaggacgaggcaaagctgggc
gctcgcagactagcgcgctgtctgcagaaacttggcttcaaggtgaggttttcagctttc
aaggttgtgaatgtgctcgccgtttgctccatgccattttcaattcacttggtagacttc
acaaagaacaaccggcccatagccagttatgagcctgagcttcaccctgctgctacatac
agaatcaagaatataaaggctactgtacaggtgttttccactggaagcctcacgattaca
ggaccaaatgtgcagaatgttgcaacagctgtggagcaggtctacccactgctgtttgag
tgtcggaaacccctctgcaaatag
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