Oryzias latipes (Japanese medaka): 101172912
Help
Entry
101172912 CDS
T02443
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04020
Calcium signaling pathway
ola04080
Neuroactive ligand-receptor interaction
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101172912
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101172912
04082 Neuroactive ligand signaling
101172912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101172912
Ion channels [BR:
ola04040
]
Ligand-gated channels
Glutamate (ionotropic)
101172912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
101172912
NCBI-ProteinID:
XP_011479272
LinkDB
All DBs
Position
11:14947052..15191786
Genome browser
AA seq
1968 aa
AA seq
DB search
MVAPGPTLSLLLAVLACMGPVRPSPPLLLRPRERERDSGGINIAVVHSGSSLLPEAAVVG
GAGVGEPGGASGLGNGPGGGRGVTDTASLAELTGMGSVAASSSYLAALVGETVMTPSGQA
NVIYLAVNESSPGTLLLQLCELLATTPLQGLVFEEERPPPPNRAPLAPMLEFVSAQTGVP
VVAVGGGASLGREPQESGSIYLQFTCSTMLQLEVIFEVLEEYDWTAFSVVTTRHHGYEDF
LAMVEGMTDGSFIGWEKRSVVVLNVTDDPGGTRTKRLLKDNESQVRLLYCSMEEAELIFR
AAWAADQAGPSHMWFAVGPALSGLGLEGLPKVLFAIRPQGWRDEPRRRIAKGVSVLTHGA
MALRRDQGATSRAQYAGNCQGDGNHTHRVLDRIRYFTNISIGGRDYSFNSDGYLSNPLID
VISYTNGRGWEEVGWWENGHLRLRYHPWSRYGSFLKPLDDSQHLRVVTLEERPFVIVEPA
DPGTSSCIRDSVPCRMPINSSLVVEGATPMKHCCKGFCIDVLKRLAKIVGFTYDLYLVTN
GRHGKNIDGEWNGMVGEVVSNRADMAIGSLTINEERSEVVEFSVPFVETGISVMVSRSNG
TVSPSAFLEPYSPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKKSGGSKFTIG
KSVWLLWALVFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTV
SGLSDKKFQQPTEQYPPLRFGTVPNGSTEENIRSNYPNMHQYMIRNNQKGVEEAIDNLKT
GKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQL
VGDDEIDMLERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHMVY
WKLRHCVKRSGGMDFLLALSRGMYSCCQFEDETAPGGGAGTLPQYHTVTTMPNAPQQHLV
TATVNNTTAIAMVQQQQKHHQQQSGQTYTTMLPGSPPTTGHSAVALGPSNSPLLEGPMPC
STFLPRHDRRLAVVDRWNRPKQEKAMGGGSSGGVGIGGIAGGITDLQAKQQYQQNLGQAW
SMQRGAGVACDTGLDEYKRYYGPIDPEGLGSNTDQQVGGLQQTPKANPRGIKALGMPRLP
PKGMQQGQAHLISKPPPPMPSSPRRPPFWRRGSLAQARRKGSGGPLYENILPLGRRGGGR
YGANDGGRKRGRHPLPPPTLPVPLSSPTHTPTTPSSPCCFYSSCSSASSSSSSSSSSSSS
SSTGSLSRSNSPSSCSSDSSYNSSLSFRYRAGNRDFVVDDEGDSDLLTEESSLLLGSKKK
IRTRRMSSRSLPCSPPPPPVPPRKPRPQRDYVRDRTGSQLAQLQEWWASWADRERVRRSS
TSRGDGEVGREEKRHHKEREHERKRRKKGRKKKKREERERERERKQRKTKKKRKKEDKTR
KRDQKRSEQEGGEPDKREEPKSGTLDFPPYPSLRRQSFRKKSESSIRSYGWNIPGENERK
EREEKERGDGEDCKEKERHHRRRNSKHYNSSSSKPSTSVKFWGGGNPSSDATPSAFLPLL
PASSKRRKSKSSDRDTLGIEGERRPLLGRNDRGELQSKEGLSFHEWESPAENVEDGSEPE
MRKAEHGKRHRGGRTTSDEERERDKVVGIYSDDDGSSGEFGKFERYWEDHEGRAVGGIGG
GGWFFSTYPSRDKTGSINSRDDLFQERGQRWRTAEGGWSSSAVGGGGEERGWGSGSHWPP
PPLTPPPPRRYWSVDKLHVQEDKKSKRKSKDKGKGHTTCSSCHSPRHHPHSSKWARVTSR
SQEELYRHCQSFGGPLKPKHDSSSSTKPDRSHNPTKTGSQSNISIQQRTQRADRDRERGI
QPSPPSSLIPNLPPPLPALPAPPSSSHSIHVPPQTSSSSVSSPSVVSSAPGAPHASSMAS
ASAKLQYQRLRSIPQPQRFPQSPHLPLKAKSLCSRRDSAQFSSVESEV
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggtggccccagggcccaccctctcactgctgttggctgtcctggcctgcatggggccc
gtgcgcccctcgccccccctgctgctccggccccgggagagagagagggactcgggtggt
atcaacatagccgtagtccactctggctcctccctgctcccggaggcggcggtggtggga
ggcgcgggggtcggcgagccaggtggtgcgtccggtctgggaaatggtcctggaggagga
aggggagtcacggacacggcttcactggcagaactgactggcatggggtctgttgctgct
tcctcgtcatatctggcggctctggttggggagacagtgatgacgccatcgggtcaggcc
aacgtaatctacctggctgtgaatgagagcagtcctggaaccctgctactgcagctgtgt
gagctgctggccaccacacccctgcagggccttgtgtttgaggaggagaggccgccgcca
cccaaccgcgcccccctggctcccatgctcgagttcgtctccgctcagacgggggttccc
gtggttgctgttgggggaggagctagcttgggccgcgagccacaggagagtggctccatc
tacctccagttcacctgctccaccatgctccagcttgaggtcatctttgaggtgctcgag
gaatacgactggactgccttctccgtggttaccacccgtcaccatggctacgaggacttc
ttagccatggtggagggtatgacggacggttcattcattggctgggaaaagagaagcgtt
gtggttctcaatgtgacagatgaccctggtgggacccgaaccaaacggctgctcaaagac
aatgaatcccaggtccgccttctctactgctccatggaagaagctgagctgatttttcgg
gcggcctgggcagcggatcaggccgggccgagccacatgtggtttgccgtggggccggcc
ctgtccgggttgggcctggagggactgcctaaagtgctgtttgccatcaggccacagggc
tggagggacgagccgcgcagacgaattgctaagggggtgtctgtgctcacacacggggcc
atggctctgcgacgagaccagggggccaccagccgggcacagtacgctgggaactgccag
ggcgacggcaaccacacccaccgagtgctagacaggatcaggtacttcactaacatctcc
atcggtgggcgggactattccttcaacagtgacggatacttgtccaacccgctgatcgat
gtcatctcctacaccaatggcagaggctgggaggaggttggctggtgggagaacggacac
ctgcgtctgcgttaccatccatggtctcgttacggatcttttttgaagcccctggacgac
tcgcagcacctccgcgtggtcactttagaagagaggccttttgtcatcgtggagcccgct
gaccccggcacaagctcctgcatccgggactctgtgccctgcaggatgccaataaactcc
agtttggtggtggagggagcaactcccatgaagcactgctgcaaagggttctgcattgat
gtgttgaaacgtctggccaagattgtaggcttcacctacgatctttacctggtgacaaac
ggccggcatgggaagaacattgacggggagtggaacggcatggtcggcgaggtggtttcc
aacagagccgacatggccattggctccctcaccatcaatgaggagcggtcggaggtggtg
gagttctctgttccgttcgtggagaccggcatcagcgtcatggtttcccgcagtaatggc
acagtttctccctctgcgttcctggagccctacagcccggcggtgtgggtgatgatgttt
gtgatgtgcctgtcagtggtggctgtcacagtcttcatctttgagttcttcagccccgtg
ggatacaaccgcagcctgcagagtgccaagaagtcaggcggatcaaagttcacaatcggg
aagtctgtctggttgctgtgggcgctggtttttaacaactctgtgccggtagaaaatccc
agaggaacgacgagcaaaattatggtgctggtgtgggccttcttcgctgtcatcttcctg
gcctcctacactgccaacctggcagccttcatgatccaggaggagtacattgacacggtg
tcagggctgtcagataagaagtttcagcagccgacagagcagtacccgcctctacgcttc
ggcacagtgccaaatggaagcaccgaggagaacatccgctccaactatccaaacatgcat
cagtacatgatccggaacaatcagaagggtgtggaggaggccatcgacaaccttaagacg
ggcaaactggatgccttcatttatgatgcagcagtgctgaactacatggcgcgaaaagac
gagggctgcaaggtgatgaccatcgggtcgggtaaggtattcgccacaacaggttacgga
atcgccctgcacaagaactcccgctggaaaaggccgctggacctggctctgctgcagttg
gttggagacgatgaaattgatatgttggagcgcctttggctgtctggtatttgccacaac
gataaaatagaggtgatgagcagtaagctggacatcgacaacatggcaggagttttctac
atgctcctggtagccatgggcctgagtctgctggtgtttgcctgggagcatatggtgtac
tggaagctgcgacactgtgtcaaaaggtctggtgggatggacttccttctggctttaagc
agggggatgtacagttgttgccaatttgaggatgagacggcaccaggagggggtgccggc
actttgcctcaataccacactgtgaccaccatgcccaatgccccgcaacagcaccttgta
acagctacagtaaacaacacaacagccattgccatggtccaacaacagcagaagcatcat
caacagcagtcagggcagacctataccaccatgctacccggctcaccacccactacggga
cattcagcagtggcattgggtccctcaaatagtcccttactagagggccccatgccttgc
tccaccttcttgcctcgtcatgaccgcagactggctgtggttgatcgctggaacagacca
aagcaagagaaagccatgggtggaggcagcagtggaggagtgggtataggaggaattgca
ggaggaatcactgacctacaggccaaacagcagtatcagcagaacctggggcaggcctgg
agcatgcaaagaggagcaggtgtagcatgtgatacaggtttagatgaatacaagcgttac
tatgggcctatagatccagaagggcttggaagtaacactgaccaacaggttgggggcctt
cagcagactccaaaagccaatcctcgaggcattaaagccttgggaatgccacgattgcca
cctaaaggcatgcagcaaggtcaagcacacttaatttccaagcctcctccaccaatgcca
tcctcccctagaaggcctcccttctggagacgaggaagccttgcacaggcaagaagaaaa
ggctcagggggtcctttgtatgagaatatccttcctttaggaaggcgaggagggggaaga
tatggagcaaatgatggaggtagaaaaaggggacgccacccccttccacctcctactctt
ccagtccccctatcgtctccaactcataccccaacaactccctcctctccgtgctgtttc
tactcatcttgctccagtgcctcatcttcctcctcctcttcatcctcctcatcttcttct
tcatctacagggtcactttctcgatcaaattccccctcttcttgctccagtgacagctct
tacaactcatcactgagtttccgttatcgggcaggaaaccgtgactttgtagtagatgat
gagggtgattcagatttactcacagaagaatccagccttttgctgggatcaaagaaaaag
atccgcacccgtcgaatgtcatcccgctcactgccatgcagccccccacctcctcccgtc
cctccccgaaagccccgtcctcagagggactatgttagggacagaactggaagtcagctg
gcccagcttcaagagtggtgggcctcttgggctgacagagaaagagtaagaaggagttca
acaagccgaggcgatggagaggtgggtagggaggagaagagacaccacaaagagagagag
catgagagaaagagaagaaagaaggggcgaaagaaaaagaagagggaagaaagggaaaga
gaaagagagcgaaaacaacgcaaaacaaagaagaaaagaaaaaaagaggataagacaaga
aagagagatcagaaaaggtcagagcaggagggaggagagccagataaaagagaggaaccc
aaatcagggacactagacttccctccatacccatctttaagacgacagtcttttcggaaa
aagagcgagagctcaatcagaagctatggatggaacatcccaggtgaaaatgaaagaaaa
gaaagagaagaaaaggagcgaggtgatggagaagactgcaaagaaaaggaaagacatcac
agaagaagaaacagtaagcattataatagttctagtagtaagccctctacatctgtgaaa
ttctggggagggggcaatccttcttctgatgcaactccatctgcttttttgcccctatta
cccgcctcttctaaaagacgtaagagtaaaagttcagatagagatactttggggattgaa
ggagagagaagaccattgttgggaaggaatgaccgaggtgagttgcaatcaaaggagggg
ttgtccttccatgagtgggagtccccagcagaaaatgtggaagacggatcagaaccagag
atgaggaaagcagaacatgggaagaggcacagaggaggaagaactacatctgatgaagag
cgggaacgtgacaaggtggttggaatatattctgatgatgatggatcttcaggagaattt
gggaaatttgagagatactgggaagatcatgaagggagggcagttggggggattggagga
ggaggttggttctttagcacttatccttcaagggacaaaacagggagcatcaacagcaga
gatgatctgttccaggagagagggcaaaggtggagaacagcagaaggtggctggagttca
agtgctgttggaggtggaggtgaagaaaggggatggggatcaggttcacactggcccccg
cctcccctcacgccaccacctcctcgacgatattggtcagtggataagctccatgtgcag
gaggacaagaagagtaagcgcaagtcaaaggacaaaggcaagggacacacaacttgctcg
tcgtgccattcacccagacatcatccgcactcctccaaatgggcacgtgtgacttcacga
agccaggaagagctgtaccgccattgtcaaagttttgggggtcctttaaagccaaaacat
gattcctcatcctcaacaaaacctgatcgatcacataatcccaccaaaactggcagccag
tcaaacatcagtatccagcaaaggacacagagagcggacagggatcgggagcgagggata
caaccatcgccaccttcatctcttatacccaacttgccacccccacttcctgccctccca
gctcctccgtcctcatctcactcaatccacgtacctccccaaacctcatcctcttctgtt
tcctcaccctctgtggtatcgtccgcgccaggagcaccacatgcctcctccatggcttcg
gcaagtgccaagttgcagtaccagagactgcgctccattccgcagccccagaggtttcct
cagtctcctcatttacccctcaaagccaagagcctttgctcacgaagggactcagcacag
ttctctagtgtagagagtgaagtctga
DBGET
integrated database retrieval system
