Oryzias latipes (Japanese medaka): 101172991
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Entry
101172991 CDS
T02443
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101172991 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ola01007
]
101172991 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ola03016
]
101172991 (vars2)
Enzymes [BR:
ola01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
101172991 (vars2)
Amino acid related enzymes [BR:
ola01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101172991 (vars2)
Transfer RNA biogenesis [BR:
ola03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101172991 (vars2)
Prokaryotic type
101172991 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1b
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
101172991
NCBI-ProteinID:
XP_023815843
UniProt:
H2M4G5
LinkDB
All DBs
Position
11:21524949..21539259
Genome browser
AA seq
1089 aa
AA seq
DB search
MWRTACLSGVRRAVKTPSRLCSVSPQGLSCPLSCHYFLSSSSSTTRPRAEKRRRRLEREE
VILSAEQQPGGEGKVEKWSQTQEVVYRDLTPPGMKKDVSSVFPSSYSPEFVESSWYEWWE
KEGFFRPEQHDHLPHRTDQTFSLCIPPPNVTGSLHLGHALTVAVEDALVRWRRMQGCRVL
WVPGCDHAGIATQAVVERRLVGTKGKRRQDFTRDEFLQEVWKWKNEKGDEIYQQLRRLGA
SLDWSRARFTMDPGFCSTVTEAFVRLCDSGLIYRSEGLVNWSCALQSAISDIEVDWKDLC
GKTLMFVPGYEKPVEFGAMFTFAYPVEGLEAEVVVSTTRPETMLGDVSVAVHPDDPRYQA
FHGKQVRHPFTNRLLPIITDTAVDMELGTGAMKVTPAHDHVDFLLSQRHSLSHLSVIEGD
GRMSPLCGPWLQGVRRFDARQLVIDALVEKRLFRGEKSHAMTLPVCSRTGDIIEPLLKRQ
WFLRCNRMAEKAVQAVEDGELQIVPPHYTKTWKNWLCNISDWCISRQLWWGHQIPAYQVQ
IVGSTNKIQEQWVWGRSEEEARSRAASRYGVKPEDVILTQDPDVLDTWFSSGLFPFAVLG
WPEQTPDLKDFYPNSLLETGSDLIFFWVARMVMLGTELTGRLPFRQVLFHPLVRDKYGRK
MSKSLGNVIDPLDVIQGVSLQRLQEKVKEGNLDPREQLVAMEAQKKDFPKGIPQCGTDAL
RFALCSHRLQGEDICLSVSQVLSCRHFCNKMWQTLKFTLGVLGENSAPVSTLKETVPTGS
VERWICSRLYSTVQQCEQAFEAYELHAVTSALYSFWVHNLCDVYLEYVKPVLAKPEEQAG
IQKNTEPGVSRSQEARSVLFHCLAVSLTLLSPFMPFITEELWQRLQPFTPTAPAHSSLSM
QPYPRSSQLEHWHFSEEEENFLLVQEVIRVARSLRARCGLTKEKPSMWVVCSPSQAQVLL
HFGSAVQTLGRMSSLQLYCPDRAGAQLSVCSTPPPEGSLVGVVDNTCTVHLHLQDGVNVD
KQILQLSQKRGKLVLKLEEMLCRLQSPDHLTKVPAHVRQQMDKKLLDLKQELETIEDQLE
LLQKTQGGR
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggacagcgtgtctgtccggcgtgaggcgggcggtaaaaactccgtctcggctc
tgttctgtttcgccacagggtctgtcatgtcccctgtcttgtcactacttcctctcctcc
tcttcttccactacgcggccccgcgcggaaaaacggagacggagactggagcgagaggag
gtcatcctgtcagccgagcagcagccgggtggtgaaggtaaagtggaaaaatggagccaa
acacaggaggtcgtttacagagacctaacacctcctgggatgaagaaagatgttagctcg
gtgttcccgtcatcatacagtccagagtttgtggagtccagctggtatgaatggtgggaa
aaagagggcttcttcagacctgagcagcatgatcacctgccccaccggacggaccagacc
ttctctttgtgcatcccgcctcctaatgtgactggctctctgcacctgggccacgctctc
accgtggctgtggaggacgctctggttcgatggaggcgaatgcagggctgcagagttctg
tgggttcctggatgtgatcatgcaggaattgcaacacaggcagtggtggagagaagactt
gtcgggacgaaagggaagcgcagacaggacttcaccagagatgagtttctgcaggaggtg
tggaagtggaagaatgagaaaggagatgaaatctaccagcagctgagacggcttggagcc
tctctggactggagcagagccagattcactatggatccaggtttttgcagcactgtgaca
gaagctttcgtcaggctctgcgattcaggtttgatttatcgctctgagggtttggtgaac
tggagctgcgctcttcaatctgccatctccgacattgaggtcgactggaaggatctgtgt
gggaagaccttgatgtttgttcccggctatgaaaagccggtagagtttggtgccatgttt
acctttgcgtatcctgtagagggcctcgaggcagaagtggtggtatccaccacccgtcct
gagacgatgctcggagacgtttccgtagcggtccaccccgacgatcctcgatatcaggct
tttcatgggaaacaggtcagacacccatttaccaacaggctgctccccatcattacagac
acagctgtggacatggagctaggaacgggtgctatgaaggtgacccctgcccacgaccat
gtggacttcctgttgtctcagagacattcgctgtcgcatctctctgtaattgagggggac
gggaggatgagccccctatgcggcccgtggctgcagggcgtgaggcggttcgatgccagg
cagctggtgatagatgctctcgttgagaagaggctgttcagaggggagaagagtcatgcc
atgactttacctgtgtgcagccgcacaggtgacatcatcgagcctcttctgaaaaggcag
tggttcctgcgctgcaacaggatggcagagaaagctgtgcaggctgtggaggacggagag
ctgcagatcgttcccccgcactatacaaaaacgtggaagaactggctgtgtaacatcagt
gactggtgcatatccagacagctgtggtggggccatcagatccctgcttaccaagtccag
attgtgggttctaccaacaaaatccaggagcagtgggtgtgggggcgcagtgaagaagag
gctcgaagtcgagctgccagcagatatggagtcaagccagaggacgtcattttgactcaa
gaccccgatgttctggatacctggttttcatcgggtcttttccccttcgccgtgcttggc
tggccagaacagactcctgatctgaaagacttttaccccaattctttgctggaaacaggc
agcgacctcatctttttctgggtcgctagaatggtcatgctgggaactgagctgacggga
cggcttccattccgacaggttttgttccaccctctggtgagagacaagtacggcaggaaa
atgagtaaatctttgggaaacgtcatcgaccctttagatgtgatacaaggagtttcactg
cagagacttcaggaaaaagtgaaggaaggaaatctggacccgcgggagcagctggtagcc
atggaagcacagaagaaggacttcccgaaaggaatccctcagtgtggaactgacgctttg
agatttgccctctgctctcacagactgcagggagaggacatctgtctgtccgtctctcag
gtcctaagctgcagacacttctgcaacaagatgtggcagacgctgaaattcacacttgga
gttcttggggaaaactcagccccagtgtcgaccctaaaagagacggttcctacaggcagt
gtggagcggtggatctgctccagactctacagcacagtgcagcagtgtgagcaagccttt
gaagcctatgagctgcacgctgtcacctccgccctgtactccttttgggttcataacctg
tgtgacgtctacttggagtacgtaaagccagtcctggcaaagcctgaggagcaggcgggg
atccagaaaaacactgagcccggtgtcagcaggagtcaggaggctcgctccgtcctcttc
cactgcttggctgtgtctctgacactgttgtcccctttcatgcccttcatcactgaagag
ctgtggcagcggctacagccattcacccccacagcgccggcgcacagcagcctatctatg
cagccgtatccccgctcctctcaactggagcattggcacttctcagaagaagaagagaac
ttcctgctggtccaggaggtgatccgggtggctcgttccctacgagcgcgatgtgggctc
acaaaggaaaagcccagcatgtgggtggtgtgttcacccagccaggcccaggtcctcctg
cactttgggtctgcagttcagacccttggccggatgtccagcctgcagctctactgtcct
gacagagcgggcgcccagctgtctgtctgctccactcctccacctgaaggaagcctcgtg
ggtgtggtagataacacctgtacagtacaccttcaccttcaggatggagtgaatgtggac
aaacagatcctgcaactttctcaaaagagaggcaagcttgttttgaaactagaggaaatg
ctctgcagactgcaatctcctgaccacctgaccaaggttcccgctcatgttaggcagcag
atggacaagaagcttttggatctgaaacaggagttggaaactattgaagaccagttggag
ctactgcagaaaactcagggaggaagatga
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integrated database retrieval system
