Oryzias latipes (Japanese medaka): 101173062
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Entry
101173062 CDS
T02443
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101173062 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101173062 (cpsf4)
03019 Messenger RNA biogenesis [BR:
ola03019
]
101173062 (cpsf4)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101173062 (cpsf4)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101173062 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
101173062
NCBI-ProteinID:
XP_004071832
UniProt:
A0A3P9LZT5
A0A3B3HXW3
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All DBs
Position
8:complement(19280329..19286134)
Genome browser
AA seq
265 aa
AA seq
DB search
MQELLANVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGSAVCEFFMKGTCMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGTSEQPP
LPQQIQNQGKTAASSGRSSLSLIQLTNSSPGQRQQNNTNIISHQNNMNANRGPRPLDQVT
CYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctactagcaaacgtggatcacatcaagttcgacctggagatcgctgtggag
cagcagctgggagcgcagcctttgccgtttcccggcatggacaagtccggctcagctgtg
tgcgagttcttcatgaagggaacgtgtatgaaaggtggaatgtgtccgttccgtcacatc
agcggggagaagacggtggtgtgtaagcactggctcagagggctctgtaagaagggagac
cagtgcgagtttctgcacgaatacgacatgaccaagatgcctgaatgctatttctactca
aagtttggtgagtgcagcaacaaggaatgtcccttcctgcacatcgatccagagtctaag
atcaaagactgtccttggtacgacagaggcttctgcaaacacggtcctgactgcagacac
agacacaccagaagagtgatctgtgtgaattatctggtgggcttctgtccagaaggcaaa
tcctgtaaatttatgcacccgcggtttgagttgcctatgggaacatctgaacagccccct
ctaccacagcaaatacaaaaccagggaaagactgcagcttccagcggacgctcgtctctt
tctctcatccagctgaccaactcaagtccaggccaacgccagcagaacaacacaaacatc
atttctcatcaaaacaacatgaatgccaacagaggaccccgacctctcgaccaggtcacc
tgttacaagtgcggtgagaagggccactacgccaacaaatgtaccaaaggccaccttgcc
ttcctgagtggacagtaa
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integrated database retrieval system
