Oryzias latipes (Japanese medaka): 101173127
Help
Entry
101173127 CDS
T02443
Symbol
clec16a
Name
(RefSeq) protein CLEC16A isoform X1
KO
K19513
protein CLEC16A
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101173127 (clec16a)
03029 Mitochondrial biogenesis [BR:
ola03029
]
101173127 (clec16a)
Membrane trafficking [BR:
ola04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
101173127 (clec16a)
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
101173127 (clec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
DUF6136
Motif
Other DBs
NCBI-GeneID:
101173127
NCBI-ProteinID:
XP_020557318
LinkDB
All DBs
Position
8:16874179..16985411
Genome browser
AA seq
1096 aa
AA seq
DB search
MFGRSRSWVGGQGKAKNIHSLDHLKYMYHVLTKNTTVTDYNRNLLVETIRSITEILIWGD
QNDSSVFDFFLEKNMFAFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNNH
VNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHP
ESMVRIAVRTITLNVYKVSLDNQHMLHYIRDKTAVPYFSNLVWFIGSHVIELDKCVQTDE
EHKNKGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLTDHLLNRLFLPLYVYSLVCPEIS
EERKINPQVSLYLLSQVFLIIHYQPLVNALADVILNGDLSVFSSQKVVHSTHKSTGSEPG
VLRFIKPPESLERSLELSRSRGRKRTQKRPNYKNLGEEEDDDRAGGGGSSGSGGGGGGGG
LEESWDDDGFRGEREKGKGTEGIGGGACGSSKGSRASGEMTEEIEMVVMEKCKVSELAEQ
NITDEEKTAAATRTQMQRSRPFLDLVYNTLDCSDDDYQALFVLCLLYAISHSTGINRDLL
ERLQLPFPDQERGSYSLVLTERLIRIMSQAAQPDGKVRLATLELSCLLLKQSVLSGNHCI
IKDVHLACLEGAREESLHLLRSFYRGEEIFLDMFEDEYRSMTSKPLNVEYLMMDASILLP
PTGTPLTGIDFVKRLPCGNVEKTRRAIRVFFMLRALSLHLQEEPETQLPLTRPADLIKTD
DVLDLNNSDLIACMVVNKDGSQAQRFLAVDVYQMSLVEPETKRLGWGVVKFAGLLQDMQV
SGVEDDSRALNIVIHKPGSNPHAKPLPILQATFIFADHIRCIIAKQRLAKGRIQARRMKM
QRIAALLDLPVQPSASEVLGFSQTSNASHTGLPFRFYEQSRRAPNDPTANRSVFASVDRV
PGFAVAHCAPQHSPSPLSSPSPPSSGSGSTGRCDSVTASTISAQSPTEDGVYLEHIPPLS
SSAPSTSTLCLALAPSLTPASQPTISLLTDSATDALNVESLTLLPPANSPHLHPCAVTHS
LLRPGPSILEEKEEGPQEDGGFTLDKTDATVKEETNTTVELVTPTDESPNGSEHPAGNED
PLEFDGDLQQQADHAN
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggcgctctcgtagctgggtcggaggacagggtaaagcaaaaaacatccactcc
ctggaccatttgaaatatatgtaccatgttctgacaaaaaacaccactgtgacagattac
aatcgtaacctacttgtagaaaccatccgctccatcacagaaatccttatctggggggat
caaaatgacagctccgtctttgatttttttctggagaagaatatgtttgccttcttcttg
aacatcctgcgtcagaagtctggtcgctacgtctgtgtccagctcctccaaaccctcaac
atactgtttgaaaacatcagccatgagacttccctatattatcttttgtccaacaaccat
gtcaattccatcatcgtccacaagtttgacttctcagatgaggagatcatggcttattat
atttccttcctgaagacgctgtcgctcaaactgaacaaccacaccgttcacttcttctac
aatgagcatactaatgactttgccctgtacaccgaagccattaagtttttcaaccacccg
gaaagcatggtccgcattgcagtccgaaccatcacactcaacgtctacaaagtttcattg
gacaaccagcacatgctgcactacattcgggataaaaccgcagtcccatatttcagtaac
ctggtgtggtttattggtagccatgtcatcgagctggacaagtgtgtgcagacagatgaa
gagcataagaacaaaggaaagctgagtgacctggtagcggagcatctcgaccatctccac
tatctgaacgacatcctcatcatcaactgtgaattcctgaacgacgtgttaactgatcac
ctcctaaaccgcctcttcctgcccctctacgtttactccttggtttgtcctgaaatatct
gaagaacggaagattaaccctcaggtgtccctttacctgctgtctcaagtgtttttgatc
atccactatcaacctttggtcaacgccctagctgatgtgattcttaatggagacctgtct
gtcttcagctctcagaaagtcgtgcacagcacgcacaaaagcacgggcagtgaaccaggc
gtacttcggtttattaaaccccctgagtctctggagcgttcacttgagttgtcacgcagc
cgtggccgcaagagaacgcagaaaaggcccaattacaagaacctgggcgaagaggaggat
gacgacagagcagggggtggtggcagtagtggcagcggcggcggcggtggtggaggaggg
ctagaggagagctgggatgatgatggcttcagaggagagagggagaagggaaaaggtaca
gagggaataggaggcggagcatgtgggagttctaagggaagcagagcgagtggggagatg
acggaagaaatcgagatggttgtgatggagaagtgcaaagtgtccgaactggctgagcag
aacatcacagatgaagaaaagactgctgctgccacacgcacacaaatgcagaggagcaga
ccgtttttagacctggtatacaacacccttgactgctcagatgatgactaccaagctctg
ttcgtcctctgcttgctttatgccatctcacacagcacagggataaaccgggatcttctg
gagcgtctgcagttgccattcccagaccaggagaggggctcttacagcctagttcttaca
gaaagactgatcagaataatgagccaggcagctcagccagatggtaaagtacgtctagcc
acccttgagctgagctgcctcttgctaaagcagtctgtgctttctggaaatcactgtatc
atcaaagatgtccatttggcctgtctggagggagccagagaagaaagtctgcatttattg
cgcagtttctacaggggggaggaaatctttcttgacatgtttgaggatgaatacagaagc
atgacgagtaaaccactgaatgtggagtatctcatgatggatgcctccatcctgctgcca
cccacgggcacccctttgaccggcatcgactttgtgaagagactgccctgtgggaatgtg
gagaagacgcgcagggcgattcgtgtgttcttcatgttgagggctctgtcacttcatctt
caggaagagccagaaacccaacttcctctgaccagaccagcagaccttatcaagacagat
gatgttttggacctcaataacagtgacctgatagcctgtatggtggtcaacaaggatggc
agccaagcccagaggttcctcgcagtcgatgtgtatcagatgagtctggtcgaacctgaa
acaaaacgacttgggtggggcgtagtcaagtttgctggtcttttacaagacatgcaggtg
tctggagtggaggacgacagcagagctttaaatatagttattcacaaacccggctccaac
ccccacgccaagcccctgcccattctgcaggccacctttatctttgctgaccacattcgc
tgcatcatagccaagcagaggctggccaaaggtcgaattcaagcaaggcgcatgaagatg
cagaggattgctgctcttttggacctgccagtgcagcccagtgcttcagaggtgttgggg
ttcagccaaacttccaacgcctcacacaccggcctacctttccgattctacgagcagtcc
agacgagccccaaacgaccccacagccaacagatccgtgtttgcatccgttgacagagtc
ccaggctttgcagtcgctcactgtgcgccacagcacagtccctcaccactgtcctctcca
tctcccccctccagtggtagtggaagcacaggaagatgcgactctgtcactgccagcacc
atttcagctcagagccccacagaagacggtgtgtatttagagcacatcccacccctgtcg
tcgtctgctccctccacgtcaaccctgtgtctggctttggcaccaagcctcacccctgcc
tcccagcccacgatctctcttctcactgacagcgccaccgacgccctgaatgtggagtcg
ctgacgttgctgccccccgcaaattcaccccacttgcacccatgtgctgtgactcattcc
ctacttaggccggggccctccattctagaggagaaggaggagggcccacaggaggacggg
gggtttacgctggacaagacggatgcaacagtaaaggaggaaaccaacacaactgttgag
ctcgtcacgcccacagacgaatctcctaatggatcagaacaccctgcaggcaatgaggac
cctctggagtttgatggagacctgcagcaacaagcagaccacgcgaattag
DBGET
integrated database retrieval system
