Oryzias latipes (Japanese medaka): 101173141
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Entry
101173141 CDS
T02443
Name
(RefSeq) paired box protein Pax-6
KO
K08031
paired box protein 6
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101173141
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
101173141
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
HTH_23
Homeobox_KN
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
101173141
NCBI-ProteinID:
XP_023811341
UniProt:
A0A3B3IJ79
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Position
6:6791269..6817320
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AA seq
433 aa
AA seq
DB search
MPQKDYRSPASWETGVASMMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQYKRECPSIFAWE
IRDRLLAEGVCSNDNIPSVSSINRVLRNLASDKQQMGSLGTEGMFDKLKMLNVHTSWGGR
SSWYAGTTLSSTECPQAEGRENGISVNSSTEDSEETQMRLQLKRKLQRNRTSFTQDQIEA
LEKEFERTHYPDVFARERLANKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQISSSSSH
IPISSSFSSSAYQLLPQPAAPVSFSSGSMLGRSDPALSNSYSLPAMPSFSMAASLPMQAS
SQASYSCMLPTSPTVNARSYETYTPPHMQPHLSSQSMTSSATSSTGLISPGVSVPVQVPG
SEADMSQYWPRLQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaaagactacagaagtccggccagctgggagaccggagtggcctccatgatg
cagaacagtcacagcggggtcaaccagctcgggggggtatttgtgaatgggagacctctg
cccgactccaccaggcagaagatcgtggagctggcccacagcggtgctcggccatgtgac
atttccagaatccttcaggtgtccaatggctgtgtgagtaagatcctgggccgatactat
gagactggatccatccgtccccgggccattggagggagtaaacccagggtggccacccca
gaggtggttgctaagattgcccagtacaagagagagtgtccgtccatctttgcctgggag
atcagagaccggctgctggcggagggcgtctgctccaatgacaacatccccagtgtctct
tcaataaacagagtcctcaggaatttggccagtgacaagcagcaaatgggctcattggga
acagaagggatgtttgacaaactcaagatgctcaacgtgcataccagctggggggggcgc
tccagctggtatgctgggaccacactctcctccacagagtgtccgcaggcagaaggaaga
gagaacggcatctcggtgaactccagcaccgaagactcagaggagacacagatgaggctt
cagctgaagaggaagctgcagagaaacagaacttctttcactcaggaccaaattgaagca
ctagagaaagagtttgaaaggactcactatccagacgtgtttgctcgtgagcgtcttgct
aacaaaatagaccttcctgaagccaggatacaggtttggttttccaacagacgagcaaag
tggagaagagaggagaagttgcgaaatcagcgtcgacagatatccagctccagcagccac
attcccatcagcagcagcttcagctcctccgcctaccagcttctgccccagccggccgca
ccagtgtcgttttcttccggctccatgttgggaaggtcagatcccgccctgtccaacagc
tacagcctcccagccatgcccagctttagcatggcggccagcctgcccatgcaggcgtcc
agtcaggcgtcttattcctgcatgctgcccaccagccccactgtgaatgctcgaagctac
gaaacatacactcccccacatatgcagcctcacctcagcagccagtctatgacttcctct
gctacgtcgtcaacaggtctgatctctcctggcgtctctgtgccggtccaagttccagga
agtgaagcagacatgtcccagtactggccccgcctgcagtga
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