Oryzias latipes (Japanese medaka): 101173152
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Entry
101173152 CDS
T02443
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101173152
03041 Spliceosome [BR:
ola03041
]
101173152
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101173152
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101173152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
FUBP_C
KH_Vigilin
Secretin_N
PSD4
Motif
Other DBs
NCBI-GeneID:
101173152
NCBI-ProteinID:
XP_011478018
UniProt:
A0A3P9KV54
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Position
9:complement(31296083..31329412)
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AA seq
556 aa
AA seq
DB search
MAELQASSSQPGLKADGLADVIQRARQMVGKMGGENIPHLNSSSGSVEPSLYYQKRGGED
GVGNQLPAMGHQSRVITEDYKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSGGLME
RPCSLTGSPESIEQAKRLLVQIVERCRNGPGFHGDSEGGTSVQEMLIPASKVGLVIGRGG
DTIKQLQERAGVKMMMIQDGPMPTGADKPLRISGDPYKVQAARELVLEVIREKDGDFRSG
RSDFGVRLGGTSLDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKTDDGISPERVAMV
MGQPDRCQHAVHLINDLIQTAQERDGFGSSLRSGRVRGRGDWTMGSPGPLQEVTYTIPAD
KCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFTIRGTAQQMEVARQLIDDK
IGGSGIISNGGFGFSAFTQGPTAHQNCGSGQTFLTGVWGNTYQTSWQNPGQQDPGHSLAQ
TGQMDYSKAWEQYYKKLGQQSQQQSVMTDYSKAWEDYYKKQSQSSQQSSVPDYSAALAEY
YRQQPYLWNPAQIQDH
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctgcaggcctcctcgagccagccggggctgaaggctgacggcctggccgat
gtcattcagcgggcccggcagatggtgggtaagatgggtggagaaaacataccccacctc
aacagctcctcaggaagcgtcgagccctctctgtactaccagaaacgaggtggagaagac
ggagtaggtaaccagctcccggccatgggccatcagagcagagtaatcacagaggattac
aaggttccagacaggatggtgggcttcattattggtcgaggaggagaacagatcacacgg
atccagctggaatcgggttgtaagatccagatcgcggccgacagtggaggtctgatggag
cggccgtgttcgctgactggatctccagagagcatcgagcaggcgaagcgactgcttgtc
cagatcgtggagcgctgcaggaatgggcctggtttccatggtgacagcgagggcgggacc
tcggtgcaggagatgctgatcccagccagcaaggtggggctggtgatcggccgaggagga
gacaccatcaagcaactgcaggagcgagccggggtgaagatgatgatgatccaggacggc
cccatgcccacgggggccgacaagcctctgcgcatctctggcgacccgtacaaagtgcag
gcagccagggagctggtgttggaggtgataagagagaaggacggggacttccgatcggga
cgcagcgacttcggcgtcagactgggaggaaccagcctggatgttcctgttcccaggttt
gccgtcggcatcgtgatcggcagaaacggagaaatgatcaagaagatccagaatgacgct
ggagtccggatccagtttaagacagatgacggcatcagtcctgagcgtgttgccatggtg
atgggtcagccagaccgctgtcagcacgccgtccacctcatcaacgatctgatccagacc
gcccaggagcgtgacggcttcggctcgagcctgcgcagcggtcgggtcagaggtcgtggt
gactggacaatgggctctccaggtcctctacaggaagtaacttacaccattcctgctgac
aagtgcggcctggtcatcggtaaaggtggagaaaccatcaagagcataaaccagcagtct
ggagctcatgtggagctgcagaggaacccacctccctccaccgaccccaacacccgggtt
ttcaccatcagaggcaccgctcagcagatggaagtggcccgtcagctcatcgatgacaag
atcgggggttcaggaatcattagtaacggaggtttcggcttcagtgctttcacccagggc
cccaccgcacatcagaactgtggcagcggtcagaccttcctgactggagtttggggaaac
acttaccagaccagctggcagaaccccggacagcaagacccaggtcacagtttggctcag
acaggacagatggactactccaaagcatgggagcagtactataaaaagttaggtcagcag
agccagcagcagagcgtgatgacggactacagcaaagcgtgggaggactactacaagaaa
cagagtcagtcttcccagcagagttcggtgccagactactctgcagcgttagcagaatac
tacagacagcagccctacctgtggaaccccgcccagattcaggatcactaa
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