Oryzias latipes (Japanese medaka): 101173190
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Entry
101173190 CDS
T02443
Symbol
use1
Name
(RefSeq) vesicle transport protein USE1 isoform X1
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101173190 (use1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101173190 (use1)
Membrane trafficking [BR:
ola04131
]
SNARE
SNAP-25[C] (Qc)
Use1
101173190 (use1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Use1
DUF7610
MCU
DUF1993
Motif
Other DBs
NCBI-GeneID:
101173190
NCBI-ProteinID:
XP_023810404
LinkDB
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Position
4:32662546..32668348
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AA seq
258 aa
AA seq
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MASRLEINFIRLLSRCESIASEKRGETEWRLEKYVGALEEMLVALKKNPSKPTPEILTEY
IKKVDFLKGLLEAEKLSSPTEKALANQFLAPGRTPTVANERNSATKMVHMQTKARCTGEM
RDELLGTQQASGRGPADRDLRNRRGLPLDERQSAAELDAVLQHHHNLQEKLAEDMLNLAR
NLKNNSLAAQSIIKQDNQTLSQSMRQADLNFEKLKTESERLEQHTKKSVNWLLWIMLILV
SFTFISMILFIRIFPRLR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagattggagattaatttcatcagattgttgtctcgctgtgaatctatagcg
tctgagaagcgaggggagacagaatggaggctagagaagtacgttggtgctctagaggag
atgctggtagccttgaagaaaaaccccagcaaacccacaccagagatcctgactgaatac
atcaagaaagtggattttctgaagggactcctggaggctgagaagctgtcctcacccacg
gaaaaggccttagctaaccagttcctggcgcccggtcggactcccactgtagccaacgaa
aggaattctgccacgaagatggtccacatgcagaccaaggccagatgcacaggcgagatg
agggacgagctgctcggcacgcagcaggcctcaggcagaggaccagcagacagagatttg
agaaacagaagaggacttcctctcgatgaacgccagtctgccgcggagctggacgccgtc
ctgcagcaccaccacaacctccaggagaagctggcagaggacatgctcaacctggccaga
aacctgaagaacaactctctggcggcgcagagcatcatcaaacaggacaaccagactctc
agccagtccatgcgtcaggcagacctgaactttgagaaactgaagactgaatcggagcgt
ttggagcagcacaccaagaagtctgtgaactggctgctgtggataatgctcatcctggtg
tccttcaccttcatcagcatgatcctcttcatcagaatcttccccaggctcagatga
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