Oryzias latipes (Japanese medaka): 101173209
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Entry
101173209 CDS
T02443
Symbol
irx6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101173209 (irx6)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
101173209 (irx6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
101173209
NCBI-ProteinID:
XP_011491618
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Position
3:complement(29008368..29013276)
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AA seq
509 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTGSSQTAAAAAASFCC
PPYENRLLASSRTELNAALGMYSSPYAAAAAASQNYANYFQYGADPSALYSSLNPQYDIK
DGTSTLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTLKTWLYEH
RKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKTSDDRKDDLSK
SDQDITKNSSDCKEEKDLHLSDLEDMDEEEDCDKLDSDCEKTTPDEPDLQRVMAVSGTLH
KRDCSSDLHLSLTNSFHSFPCTIKSAPTLPPPPSDFLEPVVSKAASSTGSTAGAVSLSHF
DASEKPRIWSLARTAASGVILSAQQPGSELRNGNSAGDCQLQSSRISVAPAIQCGAMRIL
HESISVNNAESPFSEGSSLHSKVCGTGSYSHKGLQLNCSSYAALQETCQYSSIEGFSGGK
AEIQPSDLSEACGTAQVDKVTAFRPVMKR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagctatgtctttctcgcagtttggatatccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacagggagctcccagaccgccgccgccgccgccgcctccttctgttgc
cccccctacgagaaccggctcttggcgagcagccggacggagctgaacgcggcgctgggg
atgtacagctctccttacgcagcggcagctgcagccagccagaactacgccaactacttc
caatacggcgccgacccgtccgcgctctactcctctctgaaccctcaatatgacattaag
gacggcacaagcactttacactctggcatcactcaaacggctgcatactacccatacgat
cactcactgggacagtatcaatatgacagatatgggacggtagattttaacggaacagca
cggagaaagaatgccactcgtgaaaccaccagcaccctgaaaacatggttgtatgagcac
cggaagaacccttaccccaccaaaggagagaagatcatgctggccatcatcactaaaatg
actctcacccaggtctccacctggtttgccaatgccaggaggaggcttaaaaaggagaat
aagatgacctggtcaccaaagaacaagaccagtgatgacaggaaggacgacctcagcaaa
agtgatcaagacataaccaaaaactctagcgattgcaaggaggagaaggatttacatctg
agtgatctggaggacatggatgaggaagaagactgtgacaaactggacagtgactgtgaa
aagacgacgccagacgagccagacctccaaagggtcatggcggtttctggaactcttcac
aaaagagactgcagctctgacctgcacctgagtttaaccaacagcttccactcattcccc
tgcaccatcaaaagtgcgcccaccctccctcctcccccctctgatttcctggaacccgtg
gtgtccaaagcagcctcttcgactggctcgacagcaggcgcggtgtccttgtctcatttt
gacgcatccgaaaaaccccggatttggtctttggctcggacagcggcttcaggggttata
cttagtgctcagcagcccggctccgaactgagaaacggaaattcagcgggggactgtcag
ctccaaagctcccgaatttctgtggctcctgccatacagtgtggggccatgaggatcctc
catgagtctatcagtgtcaataatgctgagagccccttctctgagggctcatccttgcac
tcaaaagtctgtggaactggcagctacagtcataaaggcctccagcttaattgttcatcc
tatgctgcactccaagaaacatgtcagtactccagcattgaaggattctctggtggcaaa
gcagagatccagccatctgacctcagtgaagcctgcgggactgcgcaggttgacaaggtc
actgcattcaggccagtcatgaagaggtga
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