Oryzias latipes (Japanese medaka): 101173220
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Entry
101173220 CDS
T02443
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101173220 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101173220 (nup93)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101173220 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
101173220
NCBI-ProteinID:
XP_011474768
UniProt:
A0A3P9M6N4
H2MLE9
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All DBs
Position
6:28022015..28055031
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AA seq
820 aa
AA seq
DB search
MDGEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTPHDAADVKA
SILLGSRGLDIFHISQRLETLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFNQDVEPSFVSEVTIPGRSALDS
VEVAYARQIYIFNEKIVNGHIHPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTSVEMQMAFVRQALNVLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGHPVWAVIYYCLRCGDLNAAMQVVNRVQHQLGDFKTWFQEYMNSP
DRRLCPTSENKLRLHYRRVLRNSADPYKRAVYCLIGKCDINDNHGEVADKTEDYLWLKLN
QVCFDDDGSSSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRCHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMIRHLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIISKVALEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPVIAQVSAPQSN
KERLKNTAVAIAERYRCQGIAGEKGVDSTFYLLLDLMTFFDEYHAGHVDRAYDIMERLKL
LPLSQESVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAPAGTPGRAQRSLE
DRDVQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaaggttttggggagcttctgcagcaggcagaacagctggctgcagaaaca
gaagctgtgtcagagctgcctcatgttgaaaggaaccttcaggagatccagcaagccgga
gagaggcttcgatcccgcacgcttacccgcacgcctcacgacgcagcagacgtaaaagca
tcaatccttcttggttcaagaggattagacatcttccacatttcccagagactggagacc
ctaagcgctgccacaacctttgagcctctggagccagtcaaagacaccgatatacagggc
ttcctgaagaacgagagggacaacgccctcctgtcagccatcgaggagtctcgccgcagg
acgttcctgttggccgaggagtatcaccgtgagtccatgttggttcagtgggagcaggtg
aagcagagagttctgcacacgctgctgggagccggagaagatgccctggatttcaaccaa
gatgtggagccaagctttgtgagtgaggtgacaatcccaggaaggagtgcgctggacagt
gtggaggtggcgtatgcacggcagatctacattttcaacgagaagatagtgaacggacac
attcacccgaatctgggagatttatgtgcatcggtggcagaaagccttgatgataagaac
gtttcagatatgtggctgatggtgaagcagatgacggacgttctgctggttccagctaaa
gacaccctgaagagtcgaacttctgttgaaatgcagatggcttttgttcgtcaagcactc
aacgtcttggagaacagctacaagaactacaccatggtgaccgtcttcgggaacctccat
caggcccaactgggaggggtgcctggaacgtaccaattggtccgcagttttctgaacatc
aaactgcccggacccttacctggcatgcaggacggtgaagtggagggtcaccctgtgtgg
gcggtgatctactactgtctgcgctgcggcgatctgaacgcagccatgcaggtggtgaac
agagtgcaacatcagctgggagacttcaagacctggtttcaggagtacatgaacagcccg
gacaggcgcctttgcccgacctcggagaacaagctccgtcttcactaccgccgggtgctg
aggaacagcgccgacccctacaagagggccgtctactgcttgatcgggaaatgcgacatc
aacgataaccacggagaggtggcggacaagacagaagattatctgtggctgaagttgaac
caggtgtgcttcgatgacgacggcagcagctctcctcaggaccgactcaccctgccacag
ttacagaagcagctcctggaagattatggcgagtcccatttctcggcgagccagcagccc
ttcctgtacttccaggtgttgttcctgaccgctcagtttgaggctgccgtggcgttcttg
ttccgtgtggagagactccgctgccacgccgtccacgtcgccttggttctctacgagctc
cggctgcttctcaagtcgtccggtcagagtgctcagctgctgagtcaagaacccggtgac
ccgccgatgatacgtcacctcaacttcatccgtctgctcatgctgtacactcgcaagttt
gaatccacggatccacgggaagctctgcagtacttttacttcctacgtaatgaaaaggac
agccagggagaaaacatgttcatgcggtgcgtcagtgaacttgttatcgagagtcgagag
tttgacatgctgctggggagattagagaaggacggcagtaggaagcccggcgtgatcgac
aagtttgccggagacaccagagcgatcatcagtaaagtggccttagaggctgagaacaaa
ggcctgttcgaggaggcggtcaaactctacgagctggccaagaacccagacaaggtgctg
gagctgatgaacaggctgctgagtccggtcattgcccaggttagcgcgcctcagtccaac
aaggagaggctcaagaacaccgccgtggccatcgcagagaggtaccgctgtcaggggatc
gcaggggagaagggcgttgatagcaccttttatctgcttttagacctgatgacattcttt
gacgagtaccacgcaggccacgtggacagagcctacgacatcatggagcggttaaagctg
cttcctctcagtcaggagagtgtggaggagagagtggctgctttcaggaactttagcgat
gaggttcgccacaacctgtctgaagttctgctcgccaccatgaacatcctcttcacccag
tacaagcgcctgaagggggcgccagcgggcacaccaggacgagcacagaggagtttggag
gacagagacgtgcaactccgcagccaggccagagccctgatcaccttcgccggcatgatt
ccctacaacatggcgggggacaccaacgccaggctggtgcagatggagttactgatgaac
tga
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