Oryzias latipes (Japanese medaka): 101173229
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Entry
101173229 CDS
T02443
Symbol
nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101173229 (nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101173229 (nipbl)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
101173229 (nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
101173229
NCBI-ProteinID:
XP_011477342
LinkDB
All DBs
Position
9:11043217..11069525
Genome browser
AA seq
2545 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVTCLLGCRDEN
LASQLAHGLSQVSTEHIELKDNLGSDEPEGDAPVLLQTILARHPGIFREKNVMQQPMVPP
FKVTQNSMHSPAQPANFQPAAISPNPSSRFVAPQSGSSSRYMGQQSSPVPSPYTPQSPAP
GYIQQYPHQQPPSYNQHQQIQQVSVASPLVPGGMRNIHEGKVSGQMASAPNHHPDRHEDY
LNIVQRLGSEEGDSTLRNPSFPLRSPQSGCSPASSDGTPKSGSRPPLILQSPLPYAPSPR
EGGPDHKQLLQQRKKVPEVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNGSDPPGDVGGM
DQNSDNMEADLGFQHVPVLQQNLAARLHPQQLSQQAGGASGLQPPSSPYDAAELDALAEI
ERIEREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGAGAPTGAPGSGSTGGGNAGKL
TPQEATAAGNGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPTSGPAAV
EGSDTALRLKPDGRPDVIKNRVEKHDGRREGRESSKHRHDEKSSDRRGEMSKSSHRGEYG
RDKDRESDRDRRHRSETGSRDRRSPDSRSRSDRDRLGYHASSTGEPGRSSSRHDGSKPAS
TAAKIPDSFPAHLLGGHSGALKNFQIPKINREKDVSGSTESQMWGQPKVKLERLGLARDF
EKRPKPVVVLKKLSVDQIQRIIRHSKSGKNRFSSKSSKSGMDPAVLKELPPELLAEIEST
MPLCERVKMNKRKRSTVNEKPKYAEVSSDDDLDANGESARKRHRRDKDRAWEFEERERRA
SGEHRKSGHKDSRRGSGSRYRDSSEEDSPPPSISDIARKMKMKEKQKKRKAYEPKLTQEE
LMDSSTFKRFLASIDNILDSLEDVDFTAMAADDDEIPQELLLGKHQVNELGSESAKIKAM
GITGRIPSDKLVKLLNILEKNIQDGSKLSTLMNHDQDAEDEERLWRDLIMERVTKSADAC
LTALNVMTSARMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRVDPHGGGMLSSKAK
RAKCSTHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQ
LCAIKLVTMVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPMYIQMVT
ALVLQLIQCVVHLPSDKDVFEEFENKVDQDVLITNSYETAMRTARNFLSVFLKKCGSKQG
EEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLG
TVASRLRKDAVTSKMDQRSIDRILQQSPGTDETQQLQKALLDYLEENAETDPSLVFARKF
YVAQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKEMETTGEIMQRAERRKKFLRGIIKT
TPAHFATLKMNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAM
KCLSEVVAVDPSILARSEMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDML
IERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVKMIRRVNDEEGIKKLVNETFQKL
WFTPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACVQ
LVDNLVEHILKYEESLAENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKC
NTANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKHGMTVVQHCVSCLGAV
VNKVTHNYKFVMACFNKFYTALNKLKIQHQEDPNSSSLVVNKPFLLRSLFTVGALARHFD
FDLEEFKGNNKVVIKEKVLELLLYFTKHEEEEVKTKAIIGLGFLVIMHPSQMFVPEVKAL
YNGILADGSSSINLKIQVLKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGMS
SSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTMR
NKSDQQLVEIDKKYTGFIHMKAVAGMKMSYSLQQAINSPRKTTIRGFRQDETHTALCSHL
YTMIRGNRQHRRAFLISLLNLFDDSAKTEVNMLLFIADNLACFPYQSQEEPLFIMHHIDI
TLSVSGSNLLQTFRELLLKEPRRKEKKVKEWVNTSDGEDKEEEMNCDSPRSEKEENGNSE
IENDEDEDVVRRPKKTRKPIANSSDSESDFEDLAVEDADKVMRLLPESPTGLLDFANAVQ
GILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKSNVHFHPRQTIDFISNNM
AHATLTEDVKRRIVKQYLDFKMLMEHLDPDEEDEEGEASASANIRNKAINALLGGSGPMS
GPSPRNQAGPETDDDDSDGEERTPGSSRKPRRAGDSSDPGRMSEILDVMDVIALWCPKYK
DRPQIARVVQKTSNGYTIHWMAGSYSGPWAEAKKRDGRKVVPWVDTIKESDIIYKKIALT
SNHKLSNKVVQTLRSLYAAREGGTS
NT seq
7638 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctggtatcgctagcctcaca
gacttgttgaaccagctgcccctcccctctcctctacctgccaccaccactaagagcctc
ttattcaatgggagaattgcggaggaagttacttgtctcttgggctgtcgagatgaaaat
cttgcctcccaactcgctcatggcctcagccaggtttccacagagcacatagagctgaag
gacaaccttggtagcgatgagccagagggagatgcaccagtgttgttgcagaccatactt
gccaggcaccctggcatcttcagggagaaaaatgttatgcagcagccaatggtacctcca
ttcaaggtcacccagaattccatgcatagccctgcccaacctgcaaacttccagccagct
gcaatttctcccaatccatcaagtcgttttgtggcgccacagtcaggttcaagtagtcgg
tacatgggccagcaaagcagtccagtaccgagcccctacactcctcagagtcctgctcct
ggttacatccagcagtatccccatcaacaacctcccagttacaaccaacatcagcagatc
caacaagtgtctgttgcaagtccattggtgcccggtggaatgcgaaatatccacgagggc
aaagtgtcggggcagatggctagtgctcccaatcaccacccagacagacatgaagactac
ctgaacatcgtgcaacgcctgggcagtgaggagggcgactccaccttaaggaatccgtct
ttccccctgaggtctccacagtcgggctgttctccagcgtccagcgatggaacacccaaa
tcgggatctcgaccaccactgatactccagtcaccgcttccatatgcgccctcgccgagg
gaagggggaccggaccataagcagctgctacaacaacgaaagaaagtccctgaagtgaaa
gaggagaaagacatgtatgacattgttagctcgccaaacaaggactctacgaaactcacg
ctgaagctgtctcgggtcaagtcaaacggatccgatccgccaggagatgttggaggaatg
gatcaaaattcggacaatatggaagcagatctaggatttcagcacgttcctgttctccag
caaaatctcgccgctcgattgcatccgcagcagctttcccagcaggcaggtggagccagt
ggtcttcagcctcccagctccccttatgacgctgcagagcttgatgcccttgcagaaatt
gaaaggatagaacgtgaagcagctagtgagaagtgttctaaggaggtacaagataaagac
aagccactgaaaaagagaaagcaggactcttttccccttgaaccaggtgcagggggagca
ggtgcccccacaggtgccccaggcagtggatcaactggagggggcaatgctggcaaactg
acgccacaagaggccactgcagccggaaacggtgccagccgccctcccctcatggtgagc
atcgacctccagcaggcaggccgagctgatggccagctcgacccttgtctggctgctcct
attcctgccctcgaagcccaacgttggccggaagaaccaactagtgggccggctgcggtg
gaaggttctgacacagctttacggttgaagccagacggacggccagatgtcatcaagaac
agggtggagaaacacgacggcaggagagaaggccgagagtcttcgaaacaccggcatgac
gagaagtcctcagacagacgcggagagatgtccaagtcatcacatcgcggagaatatgga
cgagacaaggaccgtgaatctgacagggacagaaggcatcgaagtgagactgggagtcga
gataggaggtcccctgactcccgctcccgaagcgatcgagataggctgggctaccacgct
tcttccacgggagagcccggcaggagcagcagtaggcacgatggttccaaaccagcctca
acagctgctaaaattccagattctttcccagctcacctcctgggagggcatagtggagcc
ctgaagaacttccagatccctaagattaatcgtgaaaaggatgttagtggatccactgaa
agtcagatgtggggccagcctaaggttaaattggagaggctgggtttggcgagggacttt
gagaagcggcccaagcctgtggtggttctaaaaaagctttcagttgaccaaattcagagg
attattcggcacagcaaatctggaaagaacaggttctcatcgaaatccagcaaaagtgga
atggacccagcagttctgaaagaactgccgccagagttgttggcagaaattgaatcaacc
atgcccttgtgtgagagggtaaagatgaacaagagaaaacgaagcactgtaaacgagaag
cccaaatacgctgaggtcagctcagatgatgacttggatgccaatggagaatctgcgagg
aaacgtcaccgccgggacaaagaccgggcctgggagtttgaagaaagggaacggcgggct
tcaggtgaacacaggaagagtggacacaaagacagccggcggggctcagggagccgctat
cgggactcatcggaagaagattctccaccacccagcattagtgacattgccagaaagatg
aaaatgaaggaaaagcagaagaaaaggaaagcatacgaacccaagcttacccaagaggag
ctaatggactcttccacattcaagagattcttggcaagcatcgacaacatactggacagt
ttggaggatgtggatttcactgccatggcggcagatgatgatgaaatacctcaggagttg
ctgctgggtaaacaccaggttaatgagctgggaagcgaatctgccaaaatcaaggccatg
ggcatcactggcaggataccatcagacaagttagtgaagctcctaaacatcctagaaaag
aacatccaggatggatccaaactttccactttgatgaatcatgaccaagatgctgaagac
gaggaaagactttggagggatctgataatggaaagagtcacaaagtctgcagatgcctgt
ctgacagctcttaatgttatgacctcagcacgcatgccaaaggcggtctacattgaggat
gtcattgagcgcgtgctacaatacaccaagttccaccttcagaacacgctgtatccacag
tacgatccggtctacagggtggacccacacggaggcggcatgctgagctcaaaggcaaag
cgtgcaaaatgctcgacacacaagcagcgtgtcatcgtcatgctatacaacaaagtttgt
gacatcgtcagcaacatttctgagctcttagagatccaactactgacagacaccaccatt
ctccaggtttcttcaatgggaatcactcctttttttgtggagaacgtcagtgagctgcag
ttgtgtgccattaagctagtaacaatggtgttctcacgatatgagaaacaccggcagctg
atcttggaggagatctttacctctttagccagactgcccaccagcaaacgctctctcagg
aatttcagattgaacagctcagaccaggatggagagccgatgtacatccaaatggtcact
gctctggttctgcagctgatccagtgtgtggtccatctccccagcgacaaagatgtattt
gaagagtttgaaaataaggtggatcaggatgtcttaattaccaactcttatgagactgca
atgagaacggcacggaacttcctctcagtcttcctcaaaaagtgtggtagcaagcaggga
gaagaggattaccgtccgttgtttgaaaactttgtccaggacctcctttcaactgtaaac
aaaccagagtggcctgctgctgagctgttgctcagtctgctcggtagactgctggttcat
cagtttagtaataaacaaacagaaatggcgctcagagtagcatccttagattacttgggg
accgtggcttctcgtctaaggaaggacgcagtcaccagcaagatggaccagagatcgatt
gatcgtatcctacaacagtctccaggtactgatgaaacccagcagcttcagaaggcttta
ctggactacctggaagagaacgccgagacagatccatcgctggtgtttgctagaaagttt
tatgttgcccagtggttccgagatgccacaacagaggccgaaaagtccatgcgaaaccag
aatccaaaggacgaagactcttccgacggaccacaacatgcaaaggagatggaaacaacg
ggggaaattatgcagcgcgcagaaaggcgcaaaaaattcctgcgcggcatcattaaaact
acaccggctcattttgccacactgaaaatgaactctgacactgtggactatgaggactcc
tgcctcatcgtacgttatttggcctccatgaggccgtttgcccagagttttgatatttat
ttaacacagatcttgcgagttcttggagaaagtgccattgctgttaggactaaagccatg
aaatgtctgtctgaggttgtggcagtggaccccagcattctggctcggtctgaaatgcag
cgtggagttcatggccgtttgatggacaactccaccagcgtgagagaagctgctgtggag
ctgttgggcaaatttgtgctgagcagaccccagctcacagagcagtactatgacatgctc
attgagagaatactggatactggtatcagtgtcagaaagcgagtgatcaagatcctcaga
gacatctgcttggagcaaccaaccttcagcaagattactgagatgtgtgtcaagatgatc
cgcagagtcaatgatgaagaaggcatcaagaaattggtcaatgagacattccagaagttg
tggttcactccaactccagcacatgacaaagagaccatgaccagaaagattctcaacatc
actgatgttgtggcagcgtgccgagacactgggtatgactggtttgaacagcttcttcaa
aatctcctcaaatctgaagaggacgcttcatacaaaccagcgaaaaaggcttgtgttcaa
ctcgtcgacaatctggtagaacacatccttaaatacgaagagtctcttgcagaaaacaaa
ggggtaaactcaacacggctcgtggcgtgcatcaccactttatacctcttcagcaagatc
agagcccagctcatggtcaagcatgccatgaccatgcagccatatctaacaacaaagtgt
aatactgccaatgacttcatggttatctgcaacgtggcaaagattttggagctggtcgtt
cctctgatggaacatcccagtgaaacgttccttgctacaattgaagaagacctcatgaag
ctcatcatcaaacacggcatgacggttgttcagcactgtgtgagctgccttggagctgtt
gtaaacaaagtcactcacaactacaagtttgtcatggcttgcttcaacaagttctatact
gcacttaataagctcaagattcagcatcaggaggaccccaacagctcatccttggtagta
aacaagccttttctgctgcggtcgctcttcacagtgggtgccttggcccgacactttgat
tttgacctggaggagttcaagggcaacaacaaggttgttatcaaagagaaagttcttgaa
ctgcttctttacttcaccaagcatgaagaggaggaggtcaagaccaaagcaatcattggt
ctaggtttcctagtgatcatgcatccaagccagatgtttgtccctgaggtgaaggccttg
tacaacggcattttggctgatgggtcctcttccatcaacctcaaaatccaggtcctcaaa
aacctgcagacatatcttcaggaagaagacacgcgaatgcaggaagcagatcgggaatgg
aagaaactttccaagcaggaggatctcaaggagatgggagacatttcttcgggaatgagc
agctccatcatgcaactttatctgaaacaagtgttggaggcttttttccacacccagtcg
agtgtacggcactttgcactcaacgtcatagctctcacgctaaaccagggtctcatccat
cctgtacagtgtgtaccctacctcatagccatgggaacagacccagaacccaccatgagg
aacaaatctgaccaacaactggtggagattgataagaaatacacaggattcatccatatg
aaggccgttgctgggatgaagatgtcttacagcttgcagcaggccatcaattcccctcgt
aaaaccaccatcagaggcttcaggcaggacgagacccacacggctctgtgctcccacctt
tacaccatgatccgtgggaaccggcagcatcggagggcctttctcatctcgttgctgaac
ctctttgatgacagtgctaagacagaggttaacatgctgctgttcatagcagacaacctg
gcttgttttccttatcagagtcaagaggagcctcttttcatcatgcaccacatagacatc
actctgtctgtttctggcagcaacttgttgcaaactttcagagagcttctactgaaggaa
ccgaggcgcaaagagaagaaagtaaaagagtgggtcaacacgtctgatggggaggataaa
gaggaagaaatgaattgtgattctcccagaagtgaaaaggaggaaaacggcaacagtgaa
atcgaaaacgacgaggacgaagatgtggttaggcgtccaaagaagacaagaaagcccatt
gcaaacagctcggattctgagtcggattttgaggatttggctgtggaagatgcggacaaa
gtaatgaggctcctcccagaaagtcccacaggtctcttggactttgccaatgctgttcag
ggcattctgcttctgctggtgctgaaacaacatcttaagaatctctacggtttttctgac
agtaaaattcagaagtattctccaacggagtcggccaaggtgtacgacaaggcagtgaac
agaaaaagcaacgtccacttccacccaaggcagaccatcgacttcatctccaacaacatg
gctcacgcgacactgacggaggatgtgaaaagacggatagtaaagcagtaccttgatttc
aaaatgctgatggaacacctggatccagatgaagaggatgaggagggggaagcatctgca
agcgccaacatcagaaacaaagccataaatgcgctattgggaggcagcggacccatgtca
ggtcccagtccacgcaatcaggcgggaccagaaacggacgacgacgacagtgatggtgaa
gaaagaacccccgggtcatcacgaaagccgaggagagcgggggattcttccgatcctggt
cgtatgagtgagatccttgatgttatggatgtcattgccctttggtgccccaaatacaag
gaccgaccgcagatagctcgagttgtccagaagacttccaatggatataccatccactgg
atggcgggctcctactcagggccttgggcggaggccaagaaacgggatggccgcaaagtg
gtgccttgggtggacactattaaagagtcggacatcatttacaagaagattgccttgacc
agcaaccacaaactgagcaacaaagtagtacagactttacgctcactatatgcagcacgg
gaaggagggactagctaa
DBGET
integrated database retrieval system
