Oryzias latipes (Japanese medaka): 101173248
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Entry
101173248 CDS
T02443
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 26 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101173248
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101173248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
101173248
NCBI-ProteinID:
XP_020565657
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Position
16:complement(9789699..9810365)
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AA seq
722 aa
AA seq
DB search
MTPEEDLVRIAKKLDKMVSRNSTEGALDLLKELRSLKMTLKLLQETRIGMSVNSIRKHCT
DEEVISLAKLLIKDWKRLLDSGPTQSEKSSEVENGLDSSKKSSGSNSLSPETQGRWLDVK
MKSDPDRKPSDKNSEEKQKEHHTHRKMQTSEPENKKEDNEKHLQETRENKLQRVQGDKKP
VRSEDQQFRKHKLDRVKDGLIEDPKRMRHGEELKREEQSEQMKKTADDVRKEKHGKESLP
VHMPARPLVKPQKPADVSNPRFERRGVLDSSLLYPTSSPPPSQPARPLNPKRQALDVKKD
RKDDSASRNHRPPQPTIPPAKKPAAEVKKERKIPPEPNAPIALPLHLRPPPQRKEPPDPN
APLPPLPLHLHPPPLALKHPLIDGKKEKDSRKLSTDAKLPQPKHEKRERKDSVDGKISKK
LSGEAKKERKDSSESKPHLPKEPCVEVKKEKRKDSSDCKPGQLARSSSSSSNSKLERQES
SDSKRSSSPPAKKLTAEGRESLSSKPSQPGRAQRKLSTDSTERKGKSDTPRTPTTPTSPM
SLSFSSAGGLLPPHLATGDSIRDKCIEMLAAALRTDDDHKEFGVNCDSMGAEIEDYIYQE
IKATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDELKQLRNV
LTQEAIREHQMAKTGGTTTDLLQCGKCNKKNCTYNQVQTRSADEPMTTFVLCNECGYRWK
FC
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgactccagaggaagatctcgttcgaatcgcaaaaaagctggacaagatggtgtctaga
aatagcacggaaggagcactggaccttctgaaggagctgaggagccttaaaatgacactg
aagcttctccaggaaacaagaattggaatgtctgtgaacagcatcaggaagcactgcacg
gatgaagaagtcatttctttggccaaactcctcattaaagattggaagagactcttggac
tctggtccaactcagtctgaaaaatcttctgaagtggagaatggtttggactccagcaaa
aagtcttcaggatccaacagcctctcccccgagacacaaggcaggtggctggatgtcaaa
atgaaatcagatcctgacagaaagccctctgacaaaaacagtgaggagaagcagaaagag
caccacacgcacagaaagatgcagacgagtgaacccgagaataaaaaggaggacaatgag
aaacatcttcaagaaaccagagaaaataaactccaaagggtgcaaggagacaagaaaccg
gtgcgtagtgaggaccagcaattccgaaaacacaagttagaccgggtgaaggatggactg
atagaagatccaaaaaggatgagacatggggaggaactgaagagagaagagcaaagtgaa
caaatgaagaagactgcagatgatgtgaggaaggagaaacatggaaaagagagcttgccg
gtccacatgcctgccaggccgctggttaaaccccagaaacctgcagatgttagtaatcca
cgctttgaaagacgaggggttctggacagcagcctcctgtaccccaccagctcaccccct
ccttcccaacctgctcggcctctaaaccccaaacgtcaagctttggatgtaaaaaaagac
agaaaggatgactccgcctcaagaaaccatcgcccacctcaaccgaccatccccccagct
aaaaaacctgctgcagaagtaaagaaagagaggaaaattccaccggaacctaatgctcct
atagctttacctcttcaccttcgtcctcctccacaaaggaaagagcctcctgatcccaac
gctcctcttcctccacttcctcttcaccttcacccgcctcctctggctctgaaacatccc
cttatagatgggaaaaaggaaaaagacagcaggaaactgtccacagacgcaaagcttcct
cagccgaaacacgagaaaagagaaaggaaagattcagtggatggcaaaatatccaaaaag
ctctcaggtgaagcaaagaaagaaaggaaagattcatctgagtctaaacctcatcttcct
aaagaaccgtgtgttgaggtcaaaaaagaaaaaaggaaggattcctctgactgtaagcct
ggccagcttgcaagatcatcatcatcatcatctaattctaaactagaaagacaggaatcc
tccgattcaaagcgaagcagctcaccgccagcaaagaagctgacagctgaagggagagaa
tctctcagttccaaaccttctcagcctggacgtgcacagaggaagctctccacagacagc
actgagcggaaaggcaagtctgacacacccaggactcccaccaccccaaccagccccatg
tccctcagcttcagttctgctgggggtctgctgcctcctcacctggcgaccggagattcc
atcagggacaaatgtattgagatgctggcagctgccctgcgcacagacgatgatcacaag
gaatttggagtaaactgtgacagcatgggagcagagattgaagattatatctaccaggaa
ataaaggccactgacatgaagtacaagaacagagtgcggagtcgcatcagtaacttgaaa
gaccccaagaacccagggctgcgaagaaatgttctggcaggcagcatcgagttaagccgt
attgcctccatgtctgcggaagaaatggccagtgacgagctgaagcagctgaggaacgtt
ctcacccaggaggccatcagagagcatcagatggccaaaactggtgggaccaccacggac
ctgctgcagtgtggcaaatgcaataagaaaaactgcacctacaaccaggttcaaactcgc
agcgctgacgagcccatgaccacatttgttttgtgtaatgagtgtggttaccgctggaag
ttttgctga
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