Oryzias latipes (Japanese medaka): 101173258
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Entry
101173258 CDS
T02443
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101173258
04020 Calcium signaling pathway
101173258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101173258
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101173258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101173258
NCBI-ProteinID:
XP_020566801
LinkDB
All DBs
Position
17:complement(27023802..27091748)
Genome browser
AA seq
2379 aa
AA seq
DB search
MLTTSDQSLAVSPNLNFPGSCGHRREIHVQSSLSLPEPESPKRSGPGVRLGLAQGARSCS
LQVPPAVPEYLGLPPRAASFDVPCSQNDGSSDQGSGSLSPHGKRRRRGGILEQKDIIMAH
QAHKIQSTPQARRKEWEMARFGDESAPATGDCGDGDLERSGDGQDAAAAGLTASMKQAKA
QRARTMALYNPVPHRQNCLTVNRSLFIFAEDNIIRKYAKRFIEWPPFEYMILATITANCV
VLALEQHLPGEDKTPMAKKLEKTEPYFIGIFCFEAGIKLLALGFVFHKGSYLRNGWNVMD
FIVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMIPLLQI
GLLLFFAILMFAIIGLEFYSGKLHHTCMPSYDILDNETVDSSELAFACGVRKCPEKYECN
DTWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGPTWNWIYFIPLIIIGS
FFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEVMLAEEN
KNSGRSPLDVLKRASKKTGARRGAPGDDKFADTSTASMSRSRMNFRSGRRGPAAYLRRKE
RMLRISIRRMVKTDTFYLMVLSLVALNTICVAIVHHDQPDWLTIFLYYAEFVFLGLFLAE
MFLKMYGLGFRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMSFGISVLRALRLLRIFKI
TKYWASLRNLVVSLMSSMKSIISLLFLLFLFTVVFALLGMQLFGGRFIFEDYTPTNFDTF
PAAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIAV
DNLANAQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPYLYRKRAIHRGRPNFPDEPDG
PSGGVDEQPVHGPSAFANRRERRRKVNMSVWEQRANQLRKRRQMASKEELFSAPTEDTIE
TPTIPHHPPAITPEASPAHLPESPMSIGMPLPEPPMSITIPMPEPPAAGPLVTLSEEKTS
GPNHRTTGGGRHRMARKFRSSQGPEEGARHRRHRHREARTEVKSLDIMQSPHEVPQIRRS
LSQERKILDEREETEDRDEKERAEGEGEPAQDHDGMCISNPYEDVGEDGGSSVPPTSEFP
DPPQCEKLQDCTWSEQGEGDHSDSHNALSEKTPLETAVEATESTGSALESEKRQLSIKRD
KFKQEGSVAIEMSAQPLLELTPVTVNSKELEAYHSEQKDRDEETEEEEPPLPPKPVVPDS
MFIFKASNPIRRICHYVVNLRYFEMTILLVIVASSIALAAEDPVCTNSNRNKVLRYFDYV
FTGVFTFEMIIKMIDQGLILHDGSYFRDMWNLLDFIVVVGALIAFALTNVMGNNKGRDIK
TIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQLFK
GKFFFCTDSSVNSEKECRGFYIDYSRDKKEVKRREWKRHEFHYDNVCWALLTLFTVSTGE
GWPQVLQHSTDVTEENLGPSRGNRMEMSVFYVVYFVVFPFFFVNIFVALIIITFQEQGDK
MIQECSLEKNERACIDFAISAKPMTRYMPQNRQTFQYRLWHFVASPSFEYTVLVMIALNT
VVLMMKYHSAPTAYDTVLKHLNTAFTVLFSMECILKIMAFGFVNYFRDTWNIFDFITVLG
SITEIVVDLQSVNTINMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIA
MLFFIYAIIGMQVFGNIKLNDESHINQHNNFKTFFSALMLLFRSATGESWQEIMLSCLSG
QECEPDPSIAPLTMSPDHEGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRD
SSILGPHHLDEFVRIWGEYDRLACGRIHYTAMYEMLTHMSPPLGLGKKCPAKIAYKRLVL
MNMPVDEDMSVHFTSTLMSLIRTALDIKIARGGEDRIALDMELQKEISIIWPYLPQKTLG
LLVPINKDTDMTVGKIYASMMIMDYFKQNKAKKLRQQLEAQKSNLMFKRLDASTLPEDVL
SNTQPLPLMAHSAGSALTRGGFVALSPISPQELFLQPISSDADANQQVGECKWGIELPLG
KGLCVRASSMPRLAVELQAEATSSSMKRSVSTVADERLNGLWQEEKSPERLYRPRHKSYK
AAVSRSERGRSKERCHLLSPDASRCNSEERSLQPSQSFSPGRTNFQDKQGNSSDSPVPST
SESSTPSGQRPMSQTPTSSRPHISYSPLVCRTHTSVGEDEDEQGSPESMRRGKPTGGHAA
ERRREPGHHSSPPRRYPSEPFLTSQEDDHSPDPTGPMETLTFEAAVACSLGRSNTIGTAR
PRWRSGWQVPNGHFRKRLVQTASAAGCDPLSDTEEDDRC
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccacctcagaccagtccctcgccgtttcaccgaacctcaactttccaggaagc
tgtggtcaccggagagagatccacgtccagtcctccctgtctctgcctgaacccgagagc
ccgaaaagatccggccccggcgttcgtctaggtctggcacaaggagcccgttcctgctcc
ctgcaggttcctcccgccgtcccggagtacctgggcctgcctccccgagcagcaagcttc
gatgtgccttgtagtcagaacgatggctcgtctgatcaaggctcggggtctttgagccct
catggcaagcggcggcggcgaggggggattctggagcagaaggacatcatcatggcacac
caagcccataagatccagagcacgcctcaagcccgcaggaaggagtgggagatggctcgg
tttggagacgagtccgctcccgccacgggggactgtggggatggcgacttggagcgcagc
ggcgacgggcaggacgcggcggcggcgggactcacggcgtccatgaaacaagccaaagca
caacgggcccggaccatggccctgtacaaccccgtcccccaccggcagaactgcctcacc
gtcaacaggtcgctctttatatttgcagaggacaacatcattaggaaatacgcgaagcgc
ttcattgaatggccaccctttgagtacatgatcctggccaccatcactgctaactgtgtg
gtcctcgctttggagcagcacctacctggagaagacaagacgcccatggcaaagaaactg
gagaagacagagccgtactttattgggattttctgctttgaggctgggatcaagctgttg
gctcttggctttgttttccataaaggatcctacctaagaaacggctggaacgtcatggac
ttcattgtcgttctcagtgggatcctggccacagctggtgcccacatgaacatccctgtg
gacctgcggaccctcagggctgtgcgagtgctgagacctctcaaactcgtctctggaatc
ccgagtttgcagatcgtgctgaagtccatcatgaaggccatgatccccctgctccagatc
ggcctgctcttgttctttgccatcctgatgtttgccatcatcgggctggagttttacagc
gggaagcttcaccacacctgcatgccatcgtacgacattctcgataacgagactgttgac
tcatctgagctggcatttgcatgcggtgtgaggaaatgtccagagaagtatgaatgcaat
gacacctggattgggcccaatgatggcatcacacagtttgacaacatcctgtttgctgtt
ctcaccgtcttccagtgcatcaccatggagggatggacggctgtgctctacaacaccaac
gatgccttgggtcctacatggaactggatatacttcattcctctcatcatcatcggctcg
ttctttgtcttgaatctggtgttgggagttctgtcaggagaatttgctaaggaaagagag
agggtggagaaccgaagggccttcatgaagctacgccggcagcagcaggtggaacgagag
ctcaatggctacagagcttggattgacagggcagaggaagtgatgctcgcagaggagaat
aaaaattcagggagatcaccattagatgtgctaaagagggcgagtaagaagacaggcgca
cggagaggtgcgccgggagatgacaagtttgctgacacatccactgccagcatgtcacga
tcaagaatgaacttccgcagtggccgccgtggtccggccgcttacctgcggcgcaaggag
cgcatgttgcgcatctccatccgccgtatggtgaagactgacaccttctatttgatggtg
ctgagtctggtggctctcaacaccatctgcgtggccatcgtgcaccacgaccagcctgac
tggctcaccatcttcctctactatgcagagtttgtgttcctggggttgtttttggctgag
atgtttctgaaaatgtacggtcttggtttccggctttacttccactcatcattcaactgc
tttgactgtggggtcattgttgggagcatctttgaggtagtttggggcttcttcagaccc
ggtatgtccttcggtatcagcgtactgagggcactgagactcctgagaatttttaaaatc
acaaaatactgggcatccctcagaaacttggttgtttctctcatgagctccatgaagtcc
atcataagcctgcttttcctgcttttcctcttcactgtggtgtttgctctccttgggatg
cagctctttggagggaggttcatctttgaagattacactcccaccaactttgacacgttt
ccagctgccatcatgacagtgtttcagatcctgaccggggaggactggaacgaagtgatg
tataatgggattcggtctcagggaggtgttcagtacggcatgtggtcgtccatctacttc
attgtgctgacgctgtttggaaactacacgctgctgaacgtcttcttagccatcgcagtg
gacaacctcgccaatgcacaggagctgaccaaggatgaagaggaggaagaagagttcttc
aatcagagatatgccaggggaagagatggcctgatatctgatggcagaagaagaccctat
ctatacagaaaacgggcgatccatagagggcgaccaaatttcccagacgagcctgatggt
ccatctgggggcgtagatgagcagccggtccatggccccagtgcctttgccaaccgcaga
gaaaggaggaggaaagttaacatgtctgtctgggagcagagagccaaccagctaagaaaa
cgccgtcagatggcgagcaaggaggagctgtttagcgcgccgacagaagacacaattgaa
acccccaccatcccccaccacccacctgccattaccccagaggccagcccagctcacctg
ccagagtcccccatgtccatagggatgcccttacctgagccgccaatgtccatcaccatc
ccaatgcccgagcccccagcagctggacctctggtgaccctgagcgaagaaaaaacgtca
ggaccaaaccaccggacgacgggagggggcagacacaggatggctcggaagttcaggtcc
agtcaggggcctgaagaaggggccaggcacagacgacatcgtcaccgggaagcccgtact
gaagtcaagagtctggacattatgcagtctccacatgaggtgcctcagatccgacgatcg
ctcagccaggagaggaagatcctggatgaaagagaggagacggaggacagagatgagaag
gagagagcagaaggagaaggagaacctgcccaggatcatgatggaatgtgcatttcgaac
ccatatgaagatgttggggaggacggaggaagctctgttcctccaacaagtgagtttcct
gatccccctcaatgtgagaagctgcaggattgtacttggtccgaacagggggagggcgac
cactcggattcccacaatgccctgagtgaaaaaacccccttagagactgctgtggaggcc
acagagtctacagggagcgcccttgagtcagagaaacgccagctctccatcaaacgtgac
aagttcaagcaggagggcagcgtggcaattgaaatgtctgcacagccccttctggagctc
acacccgtgacagtgaacagtaaagaactggaggcgtatcattctgagcagaaagataga
gatgaggagacggaggaggaggaacctccgctccctccaaaacctgtggtcccagacagc
atgttcattttcaaggcttccaacccaatcagaaggatttgtcactatgtggtcaatctg
cggtatttcgagatgaccatcctcctcgtgattgtggccagcagcatcgcgctggcagct
gaagatcctgtctgcaccaattcaaacagaaacaaggtgttgcgatactttgactacgtc
ttcactggagtgtttacctttgaaatgatcataaagatgatagaccagggtctcattctg
cacgacggctcctatttccgagacatgtggaacctcctggacttcatcgtagtggtggga
gctctgatcgcctttgctctaacgaatgtgatggggaacaacaaaggcagagacatcaag
acgataaagtccctcagagttctaagagtcctgcggcctctcaaaaccatcaaaagactt
ccaaaactcaaggcggtttttgactgtgtggtcacgtctctaaagaatgtgttcaacatc
ctcattgtgtatcagctcttcatgttcatctttgctgtcatcgcagtgcagctcttcaag
gggaagttcttcttttgcaccgacagctccgtgaactcagagaaggaatgtcgaggtttc
tacatcgactacagcagagacaagaaggaggtcaagaggagagagtggaagagacacgaa
tttcactatgacaacgtctgctgggccttactcacgctgtttactgtgtcgaccggagaa
ggatggcctcaggtccttcagcattccacggatgtcacagaggagaacttggggccgagt
cgcgggaacagaatggagatgtctgttttctacgtggtttactttgtggtcttccctttc
ttcttcgtcaacatcttcgtggctctcatcatcatcaccttccaagaacagggagacaaa
atgatacaggagtgtagcctggagaaaaacgagagggcctgcattgacttcgccatcagc
gcaaagcccatgacccgatacatgccacagaaccgacaaaccttccagtacaggttgtgg
cattttgtggcgtcgccttcttttgagtacacagtcctggtcatgattgccctcaacact
gttgttctgatgatgaagtatcactcggcgccaacagcttatgacactgtgctgaaacac
ctaaatacagcgttcactgtgctcttctccatggagtgcatcctcaagatcatggcgttc
ggttttgtgaattattttcgagacacgtggaatatttttgattttattaccgttcttgga
agcatcacggaaatagtggtggatttgcagtcggtgaataccatcaatatgagtttcctg
aagcttttcagagcagctcggttgatcaagctgctgaggcagggctacaccatccgtatt
ctcctgtggaccttcgtgcaatccttcaaggctcttccttatgtctgcctgctaatcgcc
atgcttttcttcatatacgccatcattggaatgcaggtgttcggaaacatcaagttgaat
gatgagagccacattaatcagcacaacaatttcaaaacctttttcagcgcactaatgctt
ttgttcaggagtgcaaccggggagtcctggcaggagatcatgctctcctgtctctctgga
caggagtgtgaaccagatccctccatcgctccgctcaccatgtctccagaccacgagggc
ggctgtgggactgactttgcttactgttacttcgtctccttcatcttcttcagctcgttc
ctgatgctgaacctctttgtggctgtgattatggataattttgagtacctgactcgggac
tcatcgatcctgggcccccatcacctagatgagtttgtccgaatctggggggagtatgac
agactggcctgtgggcgcattcactacacggccatgtatgagatgctgacgcacatgtca
cctcctctgggtctgggtaaaaagtgtccagctaagatagcctacaagcggctggtgttg
atgaacatgcctgtggacgaggacatgagcgttcacttcacctccactctgatgtcgctc
atccgcacggctctggacatcaaaatagctcgaggtggtgaggaccgcattgccttggat
atggagctgcagaaagagatcagcatcatttggccgtatctgccccagaagaccttaggt
ctattggtacctattaacaaagatactgacatgacggtggggaagatctatgcttcaatg
atgataatggattacttcaaacagaacaaagccaagaaactcaggcaacagctggaagct
cagaagagtaatttgatgtttaagcgtctggacgcctccacgctcccagaggacgttctg
tccaacacccagccgctgccactgatggcccacagtgctggctcggccttgacgagaggt
ggttttgtagctctgagccccatttcacctcaggagctgttcctgcagcccatcagctca
gacgctgatgctaaccagcaggtgggagagtgcaagtgggggatagagcttccccttggg
aagggtctgtgtgtgcgggcctcttccatgccccgcctggctgtagagttgcaggccgag
gctacaagcagctccatgaagcgttcagtgtccaccgttgcagatgaacgcttaaatgga
ctctggcaggaggaaaaaagtccggaaagactctaccggcctcggcataaaagctacaag
gcagctgtttcccggtctgagcgcggccgttccaaggagcgctgccacctcctgtctcca
gacgcgtctcgctgtaactcagaggagagaagcttgcagccttctcaatccttcagccca
gggaggacgaacttccaggataaacaggggaacagttccgacagtccagttccttccacg
tcagagtccagtacgcccagtggccagcgaccaatgtcccagaccccaaccagctcccgc
cctcacatctcctactccccacttgtgtgccgcacacacacctccgtgggagaagatgag
gatgagcaaggcagcccggagagcatgaggcgaggtaagcccacggggggccatgcagca
gagaggcggagagagcccggccatcactcgtccccgccgcgacgctacccctctgagcct
ttcctgacctcgcaggaggacgaccacagcccagaccccacaggtcctatggagacatta
acctttgaagctgcggtagcctgcagtttgggacgctcaaacacgatcggcacggcccga
ccacgctggcggtccggctggcaggtccccaatggacactttaggaagcgtctggtgcag
acggcctctgctgcgggctgcgaccctctcagtgacacagaggaggacgacagatgttag
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integrated database retrieval system
