KEGG   Oryzias latipes (Japanese medaka): 101173290
Entry
101173290         CDS       T02443                                 
Symbol
ercc5
Name
(RefSeq) DNA repair protein complementing XP-G cells
  KO
K10846  DNA excision repair protein ERCC-5
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    101173290 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ola03400]
    101173290 (ercc5)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     101173290 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 101173290
NCBI-ProteinID: XP_011488587
UniProt: H2LJU5
LinkDB
Position
3:complement(16603035..16611775)
AA seq 1078 aa
MGVHGLWRLLESTGKPINPETLEGKILAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFH
RICKLLFFRIRPVFVFDGDAPLLKKQTLAQRRQRKEELTRESKQTNEKLLKTFLKRQAIK
AALGDHSKDPLPSLSSVRRDEVDDLYVLPAVPPAEDVEKNRSPSPSSEEESQEEADSFHA
YQEEDPNSVDINSEEFASLPAEMRHEMLKEMREFSKRRRTMFHKPPECSGDFSQYQLAGL
LQRNRLNLRLEGVEKEMSQHSAGSAQQLCQREGDLVSHSVEANRLVSEDNSHYILIKGSK
NNHATSESKPATAAWSGLSVSGIRKPADRPEPLWKPVLEDEDEVQATCSGDSKPPQRLQR
EGTPPSPRTLKAIQAAMNDSSNEGEAEQKDGSVSPRTVRAIQQALTEKEEDSINKSLHHP
VPPVDISRSDEETRTSLSETSEFNRNAAGQSPVIDDSSYSSSSEEEMEEVIGQRNKALRF
AALDLPHDTATESKEENGKPPEKEEDPEQREQDAALESSADRARNRDHQPDRGNPSELLE
RKVDKTSEETNKDETKPESSEESDSEESFIEVPEELKVEDTVVKTAEKRPPDEICADQTK
KEEEAEAAGIEGTDRPAAAVDAEGDEDEEGKLKEEADTKAAPALAVNEWEQLDMEDLEAL
ENSLQMEQSNLKDQKQQQERMANTVTGQMYLESQELLRLFGVPFLVAPMEAEAQCAALDR
ADQTHGTITDDSDVWLFGGRHVYKNFFSQNKYVEHYQYSDLQNQLGLDRAKMINLAYLLG
SDYAEGVPGVGYVTGMEILNEFPGPGLEPLKQFSQWWSQAQENKRLTADPQDTKVKKKLR
ALKLQSGFPNPAVAQAYLEPAVDPSCSSFSWGRPQLDVIKEFCLSRFGWSSRKTEEILQP
VVKQLNSQQTQLRIDSFFRMEQQEKQVIHSQRLRRAVTCLKRKEREGGDDKDTEEEEQSP
TKSKKANLKRPDEQKEGQRSAAMAAAAGGFLGSELMLESPLASVCSPVPQSSSLKNAPLS
TKASCAELQGSSSSGEDSDIGGEMVTARSVFEGNKRGRGAKGRGGSRGRGGGRGKKNT
NT seq 3237 nt   +upstreamnt  +downstreamnt
atgggagtccacggactgtggaggctgctcgagagcacaggaaaaccaatcaaccccgag
accttggagggaaagatactcgctgtcgacatcagcatatggctgaaccaggcagtgaag
ggggtgagggaccgtgaaggcaacagcgtccagaacgcccacctcctcaccctgttccac
cgcatctgtaagctgctgttcttccgcatcagacccgtttttgtgtttgatggagacgcg
ccgcttctgaagaagcagaccctggctcagaggaggcagaggaaggaggagttgacccgg
gagtcaaaacagaccaacgagaagctgcttaaaaccttcctgaagagacaggccatcaaa
gctgctctaggagatcacagtaaagatcctcttcccagcctctcgagtgtgaggcgagat
gaggtggacgatctgtatgttttaccagctgttccaccagcagaagatgtggaaaaaaac
aggtccccttcccccagttcggaagaggagagtcaggaagaggctgacagttttcatgca
taccaggaggaagacccaaactcggtggatatcaactcggaggagtttgccagtctgcct
gctgagatgagacacgagatgctcaaagaaatgagggagttctcaaaaagacgacgaacc
atgtttcacaaacctccagagtgttcaggagacttttcgcagtaccagctggccggtctg
ctgcagaggaacaggctgaacctgcgtctggagggcgttgagaaggagatgagccagcac
agcgctggaagcgctcagcagctctgtcagcgggagggagatctcgtcagccacagcgtg
gaggccaaccggctggtttctgaggacaattcacactacattctcattaaaggctccaaa
aacaaccacgccacctcagagagcaaacctgccactgcggcctggtccggtctctccgta
tcaggcatcaggaagccggcagacagaccagaacctctctggaaaccggtcttagaggac
gaagatgaagtgcaagccacttgctctggagactccaaacctcctcagcggcttcagaga
gaggggactccaccttctcctcggaccctgaaagcaatccaggcggctatgaacgacagc
tccaatgaaggcgaggcagagcagaaggatgggagcgtgtctccacgaactgtgagggca
atccagcaagcgctaaccgaaaaggaagaagactcaataaacaagagtcttcatcatcct
gtaccaccggtggacatcagcagatcggacgaggagactcgaacttcactgagcgaaacg
tctgagtttaacaggaacgcagcaggtcaaagtccagtcatagacgacagttcatatagt
agtagctcagaggaggagatggaggaggtgatcgggcagagaaacaaagcgcttcgcttt
gcagcgcttgatctgcctcatgacacagcaacagagtctaaagaggagaacggaaaacca
ccagagaaagaggaagacccggaacagcgggagcaggacgctgctttggaatccagtgca
gacagagcgaggaatcgggatcatcagccagaccgtggaaatccttctgagctcttagag
cgaaaggtggacaaaacctcagaggagacgaacaaagacgaaacgaagccagaaagcagc
gaggaaagcgactcagaggaaagcttcatcgaggtaccggaagagcttaaagtggaggat
acagtcgtgaagactgcagagaaaagaccaccagatgagatctgtgcagaccagacgaag
aaggaagaggaggcagaggcagcggggatcgagggcactgaccgtccagccgctgctgtg
gatgctgagggagatgaggatgaagagggaaaactgaaagaggaagcagacacaaaggcc
gcacccgcactggctgtaaacgaatgggaacaacttgacatggaggacctagaggctctg
gaaaactccctgcagatggagcagagcaacctgaaggatcagaaacagcagcaggagcgg
atggccaacacagtgacggggcagatgtacctggaaagccaggagctgctgcggctgttt
ggtgttccgtttctcgtggctccgatggaggccgaggctcagtgtgcggcgctggaccgc
gccgaccaaacccacgggaccatcaccgacgactcggacgtgtggctgttcggaggacgg
cacgtttacaagaacttcttcagccagaacaaatacgtggagcactaccagtacagcgac
ctgcagaaccaactgggtctggacagagctaaaatgataaacctggcttacctccttggg
agcgactacgcagagggagtgccaggagtcggctacgtgactggaatggagatcctgaac
gagtttcctggaccaggtttggagcccctgaaacagtttagtcagtggtggtcacaagct
caggagaataagcgcctcacggctgacccccaggacacaaaggtgaagaagaaactgagg
gccttgaagcttcagtccggttttcccaaccccgccgttgctcaggcgtatttagaaccc
gccgttgatccgtcctgcagctccttcagttgggggcgcccccaactggatgtgatcaaa
gaattctgcttgagtcgttttggttggagcagcagaaagacggaggagatccttcagcct
gttgtcaagcagctcaacagccaacagactcagctgcggatagactctttcttccgcatg
gagcagcaggagaagcaggtgatccatagtcagcgactccgcagagcagttacctgccta
aaaaggaaagagcgagaagggggagacgataaagacacagaggaggaagagcaatcgccg
accaaatctaaaaaggcaaatctgaaaaggccagacgaacaaaaggaggggcagaggagc
gcagcgatggcggcggcggctggaggtttcctgggatctgagctgatgctggaatctcct
ctggcctcggtctgcagccctgtccctcagtcctcatcattaaaaaatgctcctctgtct
acaaaggcttcatgtgcagagctgcagggcagcagcagctccggtgaggacagtgacata
ggcggggaaatggtcacagccagatctgtgtttgaaggcaacaaacgcggccgaggagca
aaaggaagagggggatccagaggaagaggagggggaagggggaagaagaacacctga

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