Oryzias latipes (Japanese medaka): 101173384
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Entry
101173384 CDS
T02443
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101173384 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101173384 (snrpe)
03041 Spliceosome [BR:
ola03041
]
101173384 (snrpe)
03032 DNA replication proteins [BR:
ola03032
]
101173384 (snrpe)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
101173384 (snrpe)
Spliceosome [BR:
ola03041
]
Complex A
U1 snRNP components
Sm proteins
101173384 (snrpe)
U2 snRNP components
101173384 (snrpe)
Complex B
U1 snRNP components
101173384 (snrpe)
U4/U6.U5 tri-snRNP components
101173384 (snrpe)
Complex C
U2 snRNP components
101173384 (snrpe)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
101173384 (snrpe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
101173384
NCBI-ProteinID:
XP_004069089
UniProt:
A0A3B3HBG9
LinkDB
All DBs
Position
5:complement(23629248..23632053)
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRVMLKGDNITLLQSVST
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcttaccgaggacaaggacagaaggtgcagaaggttatggtgcagcccattaacctc
attttcagataccttcagaaccgctcacgaatccaggtgtggctttatgagcaggtgaac
atgcggatagaaggctgcatcattggctttgatgagtacatgaacctggttctagatgat
gctgaggaggtccacatgaagaccaagaacagaaagccactgggtcgggttatgttaaag
ggcgacaacatcaccttgctgcagagtgtctctacctag
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