Oryzias latipes (Japanese medaka): 101173419
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Entry
101173419 CDS
T02443
Name
(RefSeq) poly(ADP-ribose) glycohydrolase isoform X1
KO
K07759
poly(ADP-ribose) glycohydrolase [EC:
3.2.1.143
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101173419
Enzymes [BR:
ola01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.143 poly(ADP-ribose) glycohydrolase
101173419
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Gene cluster
GFIT
Motif
Pfam:
PARG_cat_C
PARG_cat_N
Motif
Other DBs
NCBI-GeneID:
101173419
NCBI-ProteinID:
XP_011486559
UniProt:
H2M0D3
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Position
19:complement(11365291..11387443)
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AA seq
790 aa
AA seq
DB search
MFGFIPYQRIARVASLLRKRVLLRKQNWVKPNKTLFLLSTQAVLMATLTDFEPSTKRQRV
EAETPSSSSQKGSASCSHGTSNETPDEGKSENKTERKLDMQPKTRANDLRGVKGKKIGAN
FQQKPLNTLEGWLVKPSKCVATAEASQTQEDVEMLGESSVETPLAPSPEGKITGMSSSDL
DEETQVLTPPDIEQDSSVSQFSADSGGQTLSHNDDGLEKQEKERCSGDSVKHKVKITDFF
SGHSTQNLQLKRIKPDKSPEEKDTDPSADARWLGTPISALKRMPECGGEPPPLKDIPGKH
TVMIMAGLLHKGTAPIPSPAKFQDTWDDVHVKMPCSKENLFPVIDEDTQEQQNKSRWELI
KETLNKKFTSAYELKKALLKYNASSAKKWDFTALSLYCCKVLEPDAAEHLFNSLLPDMVQ
LAMRASELCTKPIPLLKRGMNHSITMSQEQAACLLANAFFCTFPRRNSRKAEYSNFPDIN
FFRLFEGSSPKKIEKLKTLMCYFKSVTEQKPIGLVTFSRKVLDKSPVWRSSQTQLTKLHI
TCDGTIEDDGSGMLQVDFANKFVGGGVTSTGLVQEEIRFLINPELIVSRLFTEALDDNEC
LIITGTQQFSKYTGYSQTYQWGGSHQDATPRDGWQRRCTEIVAIDAMQFKNFLEQFHPDK
ITRELNKAYCGFSRPDTDSKNLAAVATGNWGCGVFGGDTRLKALLQMLAAAEAGRDVAYF
TFGDNRLMTDVNNMHSFLTQRNISVGEVFDLLGQYYSSVCKSCLIRRPSVSLYDFIYQQV
GCSPASDDSS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctttataccataccaacgtattgctagagtagctagcttgttaagaaaacga
gtgctgctacgaaaacaaaattgggttaaaccaaacaaaactttgttcctattgtcgact
caagctgttctaatggctacactgacggactttgaaccctcaacaaagagacaaagggtt
gaagcagaaactccgtcttcatcttcccagaaaggctcagcttcatgcagtcatggaaca
agtaatgagaccccagacgaaggaaaaagcgagaacaaaacagagagaaagctagatatg
caaccaaaaaccagagcaaatgatttgcgaggtgtgaaaggaaagaaaattggagccaat
tttcaacagaagcccttaaacactcttgaaggttggttggttaagccttcaaaatgtgtt
gccacagctgaagcaagtcaaactcaagaggatgttgaaatgcttggtgagagtagtgtt
gaaactcctttagcgccgtctccagaaggcaagatcactggaatgtcttcctctgatctg
gacgaggaaacccaagttttaactccaccagacatcgagcaggactcttccgtctcacag
ttttctgcagattctggagggcagacactctctcataatgatgatggattggaaaagcaa
gaaaaggaaagatgctcaggggactctgttaagcataaagtgaaaataacagattttttc
tcaggacattcaacacagaatctacaattgaagaggattaagccagataaatctccagaa
gaaaaagacacagacccttctgctgatgcgagatggttggggactcctatcagtgctcta
aagagaatgccagaatgcggtggggagcctcctccactaaaagatatccccggaaagcac
actgtgatgataatggcaggcctccttcacaaaggaactgctcccattccttctcctgcc
aagtttcaggatacttgggatgatgtccatgttaagatgccctgctccaaggagaacctg
tttcctgtaatagatgaggacacgcaagaacagcagaataaaagccgatgggaactcatc
aaggaaactttaaacaagaaattcacaagtgcatatgaactaaagaaagcattattgaaa
tacaacgcatctagtgctaaaaaatgggacttcacagcattaagtttatactgttgtaag
gtcctggagcctgatgctgctgaacatctgtttaactccctgctgccagacatggtgcaa
ttagcaatgagagcatctgaactgtgcaccaagccaatacctctcctgaaaagaggcatg
aatcactccatcaccatgtctcaggagcaggcggcgtgtctgctcgccaatgccttcttc
tgcacctttcctcgacggaactccagaaaggcagagtactccaacttcccagatataaac
ttcttcagactgtttgagggatcctctccaaagaagatagaaaagctgaaaacactgatg
tgttattttaaaagtgttactgaacaaaagcctattggacttgtcacattctcacgaaag
gttttggacaaatctcccgtctggagaagttcacagactcagcttactaaactgcacatc
acatgtgatggaaccattgaagatgatgggtctgggatgcttcaggtggattttgccaac
aaatttgtgggaggaggggtcacaagtaccggtctggttcaggaggagatccggttcctc
ataaatcccgagctgatcgtttctcgccttttcaccgaagcgctggatgacaatgaatgt
ctgataattacaggaactcaacagttcagtaaatatacaggctattcccagacctaccag
tggggcggcagccaccaagatgcaactccaagggatggctggcagagaagatgcacagag
attgtggccattgatgccatgcagttcaagaactttcttgaacagtttcatcctgacaaa
attacccgagaacttaacaaggcttactgtggtttttcccgtcctgacaccgacagtaaa
aacctggctgcagtggcaacaggcaactggggctgtggagtttttggaggggacacgcgt
ctgaaagctctcctccagatgctggcagctgctgaggcgggccgggatgtagcttatttc
acctttggtgacaatcgactcatgacagatgtcaacaacatgcactccttcctcacccag
aggaacatcagcgttggggaagtgtttgacctgctggggcagtactacagctcggtgtgt
aaaagctgcctgattcggcgccccagcgtcagcctctacgacttcatctaccagcaggtt
ggctgctcgccggcgtctgatgactccagctag
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