KEGG   Oryzias latipes (Japanese medaka): 101173622
Entry
101173622         CDS       T02443                                 
Symbol
cltrn
Name
(RefSeq) collectrin
  KO
K20004  collectrin
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ola04131]
    101173622 (cltrn)
Membrane trafficking [BR:ola04131]
 SNARE
  SNARE associated proteins
   Others
    101173622 (cltrn)
SSDB
Motif
Pfam: Collectrin DUF2897 FAM176 DUF6724 Tmemb_9 8xMP TMEMspv1-c74-12 COX4 DUF6773 YxzE EphA2_TM
Other DBs
NCBI-GeneID: 101173622
NCBI-ProteinID: XP_004068376
UniProt: H2MNZ4
LinkDB
Position
4:complement(28712316..28719707)
AA seq 219 aa
MLERVILLLCVLPVLAAQNCKPNAPEGHKVRLSIKTALGDEAYDWNENELFLFQSTMAYA
MRRLKGQQFIVSNIVVCNETPRVSFWFVVTSPQDPSQLVPKGEVEEAVRKSRNRINQAFM
LSDSTLEFIGILPTLAAPVEPPTPTWLIVFGVVMGLVVAGIFILLVLSSVQKKRKKNKIA
DEEEEDEDEGTRVQTPENGSTRVDYYNNSFADDERFTHM
NT seq 660 nt   +upstreamnt  +downstreamnt
atgctggaacgggtcatcctcctgctctgtgttctgccagttctggcagcacagaactgc
aaacctaatgctccagaaggccacaaagtccggctcagcatcaaaactgctttgggagat
gaagcctatgactggaatgaaaacgagctgttccttttccaatcaaccatggcttatgcg
atgaggcgcttgaagggacagcagtttatagtttccaacatcgtggtgtgtaatgagact
ccaagggtgtccttctggtttgtggtaacatctccccaggacccttcacagcttgttccc
aaaggcgaggtggaggaggctgtgagaaagtccaggaatcgcatcaaccaagccttcatg
ctgtcagactccactctggagttcattggcatcctgcccacgctggcagcgccagttgaa
ccccccacacccacatggctcatcgtgtttggggtggtgatgggtctggttgttgcgggc
atcttcattctgctcgtgctttccagcgtccagaagaaacgaaagaagaacaaaatagca
gacgaggaggaggaggatgaggatgaagggacacgagtgcaaacacctgaaaacggctcc
acaagagtggattattacaacaattcctttgcggatgatgagcgattcactcacatgtag

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