Oryzias latipes (Japanese medaka): 101173714
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Entry
101173714 CDS
T02443
Symbol
ttf1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101173714 (ttf1)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
101173714 (ttf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
101173714
NCBI-ProteinID:
XP_004072943
UniProt:
H2MNV0
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Position
9:complement(26919228..26932951)
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AA seq
610 aa
AA seq
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MEAIKESHSSKKRSLDCPPTPVNISTPVKKKKKEKEIVSPSDVSSNYKKKSKKKRRAEEE
GFNPLSDSDEVIDSHKKKRMKEVSITYPGDEQMGKKKKKKNLTGNSENERSEAETGKSRN
DTEILNQEEAVEATVSKHKDSSIITAGNNSKKRKKKKKDGSDVEGSSQEGEAPKHRKTKQ
ASIAMATERVNSETDVAVSLETSVSSSSQKKDGNGGKSEKEEAAEEETKSEQSSSRNQRL
SSTKELDLIRELEEFVPDVRNKSAHEIMKLVRYDLRRFKDFKRQGVPLRCGRYTDWENRQ
IHKNIADFAALTDIGSAEQVLFPQRFKEQAAEIRRLKIQHHFLQRIAEGIPRPCHQVYTR
AKKIFDNRNHMGRFSEDELKSLKKLHQLHGNDWKTMSDKMDRSVYALQKRFVCLAPVHGP
WSKSEESRLKQAVRDHLETVFKESLKSGLTMDQLCNNLPWKTISQKVETRHWNQCRLKWF
SLLEKMTNGGFPRGPEGYQTKILIINTLFSMSVDDQADIEWDEVAHAVGNVTPMGVQRIF
HRLKVTKVPNWSRMSYGDIIAFLHYHTVPALQKRLSSCRTAPDSQGLQAEVTYGLSDILS
TDEDFEVDNS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaatcaaagagtcacattcctccaagaaaaggagtcttgactgtcctcctact
cctgtcaatatcagcactccagtgaaaaagaagaaaaaagaaaaagagattgtttctcct
tctgatgtatcgtcaaactacaagaaaaagagtaaaaagaaaaggagggcggaagaagag
ggcttcaatcctttatctgattctgatgaagtgatagacagccacaaaaagaagaggatg
aaggaggtcagcatcacgtaccctggtgatgaacagatgggcaaaaaaaagaagaaaaag
aatttaacaggcaactcagagaacgaaaggagtgaggcggagacaggaaaaagcagaaac
gacacagaaatactaaaccaggaggaggctgtcgaggcaacggtcagcaagcataaagac
tccagcatcatcactgcaggcaacaactcgaagaaaaggaagaagaagaagaaagatgga
tctgatgtagagggaagttcacaggaaggggaggctcctaaacacaggaagacaaaacag
gctagcattgccatggcaacagaacgtgtaaacagtgagacagatgtggccgtttctctg
gaaacaagtgtcagcagctcatcccagaaaaaagatggaaacggagggaaatctgagaaa
gaagaggctgctgaagaagagacgaagagtgaacaaagcagttcaagaaatcaacgttta
tcctcgacaaaggagttggacttgatccgtgagctggaagagtttgtcccagatgtcaga
aataaatctgcccatgaaatcatgaaattggttcgttacgatctccgtcgctttaaggac
ttcaaacggcaaggtgtgccccttcgctgtggacgatacactgattgggagaatcgtcaa
attcacaaaaacattgcagactttgcggctctgacggacatcggctcagccgaacaggtt
ctgttccctcaaaggtttaaagaacaagcagcagagattcggaggctgaaaatccaacat
cattttttacagagaattgcggagggcatccctcggccttgccatcaagtctacacgcga
gcaaagaagatctttgacaaccggaaccacatgggaaggttctctgaggatgagctcaag
tctctcaagaagcttcaccaactccatggcaacgactggaaaacaatgtcggacaagatg
gaccgcagcgtctatgcactgcagaaacgctttgtctgtcttgctcctgtgcatggcccg
tggagtaagagtgaagagtccaggctgaaacaggctgtccgagatcacttggagactgtg
ttcaaggagagcttaaagtctggtctgactatggaccagctttgtaacaacctcccatgg
aagacgatcagccagaaggttgagaccagacactggaaccagtgtcgtctgaagtggttt
agccttttggagaaaatgacaaatggtggattccccagaggacctgagggttatcaaacc
aaaatcctcattataaacacattgttctccatgtctgtggacgaccaagcagacatcgag
tgggacgaggtggctcatgctgttggcaatgtaacccccatgggcgtgcagaggattttc
cacagactgaaggttaccaaagtcccaaactggagcagaatgtcgtatggagacatcatc
gccttcctgcattaccacacggtcccggctctgcagaagaggctgagctcctgcaggacg
gcgccagactcccagggtctgcaggcagaggtcacgtacgggctgtccgacatcctaagc
acggacgaggatttcgaggtggacaacagctaa
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