Oryzias latipes (Japanese medaka): 101173731
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Entry
101173731 CDS
T02443
Symbol
med13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101173731 (med13)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
101173731 (med13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
101173731
NCBI-ProteinID:
XP_023818688
UniProt:
A0A3B3I7G1
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All DBs
Position
14:21940127..22024356
Genome browser
AA seq
2148 aa
AA seq
DB search
MSSCSVPNGASLEDCHSNLFYLADLTGIKWKMFVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRPGRRELWLFWWGDDPNFTELIHHELTAGDDGLWENGLPYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPIYHLTEEHLTLAQQASTPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEEWNQFY
PISPSAKQTVSEDKPEDMDWEDDSLASVEVLVGGVRMVYPACLVLVPQSDIPVVTPVGSS
QCTAVYSGGYQVPAMQREPAMSLVTLTPPTSPEEVHTVDSHSAQKWLKMPSSSDVFSVDR
TNHHGGKVPRRLASQVVERVWQECNINRAQNKRKFSATTNCTGEEEVPEKVGAWDFVEPS
QRSYCVCSRHKSVKQRAGGAQGLTQSMGQPSQPPTKHKTGGEKVDKGEKQQKRPQTPFHH
RNLTSDETSMETEAAVGQRLNLRGQDGGRFRSANVTTIPKAPQLQSGRISTGPSEQVNSP
QPPPLSPHPCDRGEESGEGMRNPSTPNNQHFYQPPLEPCLIGVKGGGEDAGGLVCLNQHF
HSTHPHPHSGTSALTEPPEPTVYVSAAVNLEDDSSLTPWRLYNLPRRKEAEVPTPVLPID
RLRDEILPQELVSVTELMSTSKYTLKVSEERVQRYRARRNQYLSAAITDGEHEHEVDPYA
FEEGDDKFVFSSKKDKSGGEREPGNKHKSEDGGAGPSDDAQGAVGHNRMASTSLIHETDL
VVSINDLDNLFNSDEDDLAPGSKRLERTDEKGTKGLTSKEPKASTLDHVSCISSAELHQM
YPTPPSLEQHIMGYSPMNMCSKEYGSMEPNTGMTMLDGISTLGGHFKIEVEESFCSPKPS
EVKDFSFVYKPEQCQPFVGCSMFAPLKTLPSQCLPPIKTPEDCTYRPSWTMGREMLNPVP
VMTFLHKDSNIPSVGSTMDQDYSQTYTPQTQAPFVSNSAPPSNSGAGILPSPATPRFAPT
PRTPRTPRTPRGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVT
LILSESVMNLFKDCNFDSCCICVCNMNLKGADVGVYLSDPISEAQEPCSCGFSAVVNRRY
GNGSGLFLEDELDIIGRGTDVSREVEKRFEQLRLSGVGRGDRVPDELILLLQDQCTNPFS
AIVTLEHDGVKRGPSGVPVPPCVRVEERDYCSDCYMALKHGREFMDSMSGDKVDEVLVKS
TCLHQWAKENTVDMSALCSQDVLRVLMSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLVGYEYDFLVLSPFALPYWEKLLLDPFGSQRDIGYLVVCP
DNEALLSGAKSFFRDLTSVYESCRLGQHRPISRGYPDGIVLVGGSEAQSLADKPVSDWFL
KAASGNSDAFTKLKLYAQVCRHNLAPYLASQPLDSSLLTQPCPPPTSNQPSSTQQPSSAS
SAASHQGSSSIPTSSSGAGSANASASLHSHSASSGQPASTLSSAKPSSFPPFGSMGSQGS
QNGQLGQQAGAQNTGSSGDTSNTQTQGSTEPLESTLEREKVGVPTDGESHAVTYPPAIVL
YIVDPFSYEEADGCSGQLDSSVWTLSLLRCYLEMLQSLPPHIQNSISVQIVPCQYLLQPV
RGEHCHIYAQHLKSLAFSAFTQCRRPLPFSTNVKSLTGFGPGLAIDTALRSPERPERLRL
YTPPFILAPVKDKQTELGETFGEASQKYNVLFVAYCLSHDQRWLLATCTDLYGELLETCI
INIDVPNRARRKKGSGRLLGLQKLWEWCLGLVQMTSLPWRVVIGRLGRIGHGELKDWSIL
LSRRSLQSLSRRLKEMCRMCGISASDTPSILSVCLVAMEPQGSFVIMPDSVSTGSVFGRS
TTLNMQTSQLSTPQDTSCTHILVFPTSAFVQITSSSYTNIDTNIDILNGTNDAIGIFDLL
DPENELVDPDIINISPPTSPVHSPGSHYHHGGDGSKGPNTNHMPSLEEVPNLLQQPLALG
YFVSTAKAGPLPDWFWSACPHAQNQCPLFLKASLHLHVSSVQSDELLHSKHSHPLDSNQT
SDVLRYVLEQYNALSWLTCDPATQDRRSCLPLHFVVLNQMYNFIKNML
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgtagcgttccgaacggggccagcttggaggattgccattccaatctattt
tatctggctgacttgacagggatcaaatggaagatgtttgtgtggcagggccccacctct
gctcccatcctcttcccggtgacagaggaggaccccatcctttgcagcttcagtcgctgc
ctgaaggccgacgtgctgagcgtgtggaggcgcagccagcgaccaggccggagggagctg
tggctcttctggtggggagacgaccccaacttcactgagctgatccaccatgagctcaca
gccggggacgacggcctgtgggagaatggcctcccctatgaatgtcgcactttgctgttc
aaagccatccacaacctgctggagcgctgtctcatgaaccgcagctttgtccgcataggc
aagtggtttgtcaagccctacgagaaggacgaaaagcctgtcaacaagagtgagcatctt
tcctgcgccttcactttctttttgcacggggaaagcaatgtgtgcaccagtgtggagatc
aaccagcatcagcccatctaccatctcacagaggagcacctcactctggcccagcaggca
tccactccatttcaagtcatcctgagtccattcggcctgaacgggacactcacgggccaa
tcattcaagatgtcagaccctcccacccagaaactgattgaggagtggaaccagttctat
cccataagtcccagtgctaaacagactgtatcagaggacaagcctgaggacatggactgg
gaggatgactctctggcctccgtggaggtccttgttggtggtgtgcgtatggtataccca
gcctgtctggtgctggtaccccaatcggacatccctgttgtgacccctgtggggtcctct
cagtgtactgccgtctactcgggtggctatcaagtgcctgctatgcagcgagagcctgcc
atgtctttggtgaccctcacacctcccacatcacctgaggaggtgcacacagtggactct
cactctgcccagaagtggctaaagatgccttcatcttcagatgtgtttagcgtggacaga
acaaatcaccacgggggaaaggttccccgtcggctcgccagtcaggtggtggagcgtgtc
tggcaagagtgcaatatcaaccgagcccagaacaagcggaagttttctgcaacaactaat
tgtactggtgaggaagaggtgccggagaaagtgggagcctgggattttgtggagccttca
cagaggtcgtattgtgtctgttccagacacaagtcagtaaagcagcgagctggtggcgcc
caaggtctaacgcagtcaatgggacagccctcacaacccccaaccaagcacaaaactgga
ggagaaaaggtggataaaggtgaaaagcaacagaaaagacctcaaactcccttccatcat
cgcaacttgaccagcgatgagacatctatggagacggaagcagcagtaggccagagacta
aacttgagaggtcaggacggaggacgctttcgctctgcaaatgtcaccaccattcccaaa
gccccccaactccaaagtgggaggatcagcactggcccctcggaacaggtcaactccccc
caacccccaccacttagcccgcacccctgtgaccgtggagaggagtcaggggagggcatg
aggaacccttcaacacccaacaaccaacacttttaccagccacccttggagccctgcctc
attggggtgaaaggtggcggcgaggacgccgggggcctggtgtgtttgaatcagcacttc
cactccactcacccccaccctcattctgggacctcagctctcacggagcccccagagccc
actgtgtatgtcagcgcagcggttaatctggaagatgacagctctcttacaccatggagg
ttatataaccttccccgcaggaaagaggcagaggtgcccacgcccgtgctgcccattgac
aggctgagggatgagatcctaccacaggaactggtgtcagtcacagaattgatgtccacg
tctaaatatacgctgaaagtgtccgaggagcgcgttcaaagatacagagccaggaggaac
cagtatttatctgcagccataaccgatggagagcacgagcatgaggtggacccctatgcc
tttgaggagggggacgacaagtttgtcttttccagcaagaaggataagtctggaggggag
cgcgagccaggcaacaaacacaagagtgaagatggaggagcgggtccatcagatgatgca
cagggggcagtgggccacaaccgcatggcctccaccagcctgatccacgagaccgacctg
gtggtgtccatcaacgacctcgacaacctcttcaattcggacgaagacgatctggcgccc
ggttccaagcgacttgagcgaacagacgaaaaaggaaccaaaggactaaccagcaaggaa
ccaaaagcatccacgctggaccatgtgtcctgcattagttcggcggagctgcaccagatg
tatcccacgcccccctccctggagcagcacatcatgggctactcgccaatgaacatgtgc
agtaaggagtacggcagcatggagcccaacacgggcatgaccatgctggacggcatctcc
actttgggaggccatttcaagatcgaggtggaggagagcttctgcagccccaaaccatcc
gaggtgaaggacttttctttcgtatacaagccggagcagtgtcagccatttgtgggctgc
tccatgtttgcccccctcaagaccttacccagccagtgtctgccccccattaagaccccc
gaggactgcacttaccgaccaagctggacaatgggccgggagatgctcaacccagtaccc
gtcatgaccttcctccacaaagacagtaacatccccagtgtgggcagcaccatggatcag
gattacagccagacctacaccccgcagacccaagccccgtttgtatccaacagcgctccg
ccgagtaacagtggtgccgggattctgccctcacccgccacgcctcgctttgcccccacc
ccacgcacacctcgcaccccacgcacgcctcgtggcccgtccagcgtccagggctcgcta
aaatacgagaactcggatctgtactcgccggcgtccaccccctccacctgccggcctctg
aactcggtggagccagccacggtcccctccatcccagaagcgcacagcctctacgtcacg
ctcatcctctccgagtcggtcatgaacctcttcaaggactgcaactttgacagctgctgc
atctgcgtgtgtaacatgaatttgaaaggagccgacgtcggcgtgtacctaagtgacccc
atcagtgaagcccaggagccctgcagctgcggcttcagcgccgtggtcaaccgccgctac
ggaaatgggtcgggccttttccttgaggacgagctggacatcatcggccgcggcacagac
gtcagcagggaggtggagaagcgcttcgagcagcttcggctttctggagtaggaagagga
gatcgcgtcccggatgagctgattctgctcctgcaggatcagtgcactaaccccttctca
gccatcgtaaccttagagcacgacggggtgaagcggggtccaagcggggtccctgtcccc
ccctgtgttagggtggaggagagagattactgcagcgactgctacatggccctgaagcac
ggcagagagttcatggacagcatgtcgggtgacaaagtggatgaggttctagtgaagagc
acgtgtttgcaccagtgggccaaagaaaacacagtagacatgagcgctctgtgctctcag
gatgtgctgcgggttctcatgtccctccagcctgttcttcaggatgcaatccagaagaag
aggaccgtaaggtcgtggggcgttcagggtcccctcacctggcagcagttccacaaaatg
gctggtcggggctcttatggcacagacgagtctccggagcctctgcccattccgaccttc
ctggtgggttatgagtatgactttttggtgctctctccgtttgcactgccctattgggag
aaactgctgcttgatccatttggctcccagcgggacatcgggtacctggttgtttgtcct
gacaatgaggccctactgagcggcgccaaaagcttctttcgagacctcacatccgtctat
gagtcgtgtcgcctggggcagcaccgacccatctcaagaggctaccctgacggcatcgtc
ctggttggtggcagcgaagcccagagcctggcggataagcccgtcagcgactggttcctg
aaggctgccagcggcaacagtgacgcctttacaaagctcaagctctatgcacaagtgtgc
cgccacaacctcgcaccatatcttgcctcgcagccattagacagctcgctcctcacacaa
ccctgtcccccgcccacgtccaaccagccctcctcaacacaacagcctagctctgcctcc
agcgctgccagccatcagggctcctcctctattcctaccagcagcagcggcgccgggtct
gcaaacgcctctgcatccctacacagccattcagcatcttcaggtcagcctgccagcaca
ctctcatctgccaaacccagctctttccctccctttggaagcatgggaagccagggctca
cagaacggccagctgggacagcaggctggtgcccagaacactggcagctcaggggacacc
tccaacacccagacccaggggtccacagagccccttgagagcactttggagcgagagaaa
gtgggcgtcccaacagacggggagtcccatgctgtcacataccctccagccatcgttctt
tacatcgtggatccttttagctacgaggaagctgacggatgctcagggcagctggactcc
agcgtgtggacgctcagcctgctgcgatgttacctcgagatgctccagtccctgccgcca
cacattcagaactctatttctgttcagattgtaccttgccagtacctccttcagccagtg
cgaggggagcattgtcatatctacgcacagcacctcaaatctttagcgttctccgccttc
actcagtgcagacggccgctgcctttttccaccaacgtcaagtcgctcacgggtttcggt
ccgggcttggccatcgacacggcactgaggagcccagagcgacctgagcgtctgcgtctg
tatacgcctccgttcatcctcgcacccgtcaaggacaagcagacagagctcggggagacc
ttcggtgaggcatcgcagaagtacaacgtgctgtttgtggcgtactgtttgtcccatgac
cagcggtggctcctggccacatgcactgacctgtatggggaactactggagacctgcatc
atcaacatagatgtccccaacagggcaaggaggaaaaagggctcaggtcggcttctcggg
ctgcagaagctctgggaatggtgcttgggactggtgcagatgacatctcttccctggaga
gtggtgatcggccgactggggaggatagggcacggagagttaaaagactggagtattctg
ctgagcagaagaagtctgcagtcgctcagtcgacgcctgaaggaaatgtgtcgcatgtgt
ggaatctctgcctcagacactcccagcatcctcagtgtgtgcttggttgccatggagccg
cagggatcgtttgtcatcatgccagattctgtgtcgactgggtctgtgtttggccgaagc
accaccttgaacatgcagacgtcgcagctcagcacccctcaggacacctcctgcacccac
atcctggtgtttcccacctccgccttcgtccaaatcacaagctccagttacaccaacatc
gacaccaacatcgacattctcaacggcaccaacgacgctattgggatctttgacctgctg
gatcctgagaacgagttagtggacccagacatcattaacatctctccccccacttcacct
gtgcactcccccggctctcattaccaccacggaggggacggcagtaagggcccgaacacc
aaccacatgccgtctctggaggaggtccctaaccttctgcagcagcccctggccctggga
tacttcgtctcgacagcaaaagctggccccctgccggactggttctggtcggcctgtccg
cacgctcagaaccagtgcccactcttcctcaaggcctctttgcacctccatgtgtcttca
gtgcaatcagatgaactgctgcatagtaaacactcccacccccttgactctaatcagacc
tcagatgttctcagatatgtgttggagcagtacaacgccctctcctggctgacgtgtgac
ccggcgacgcaggaccgacgctcatgtctcccccttcacttcgtggtgctcaaccagatg
tacaacttcatcaagaacatgttgtag
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