KEGG   Oryzias latipes (Japanese medaka): 101173843
Entry
101173843         CDS       T02443                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101173843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101173843
   03036 Chromosome and associated proteins [BR:ola03036]
    101173843
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101173843
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     101173843
    COMPASS/SET1 complex (yeast)
     101173843
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 101173843
NCBI-ProteinID: XP_020557109
LinkDB
Position
5:1663314..1674795
AA seq 315 aa
MKITDSVLRSFRVARTYRCNSEKVNCLDYSPNGESVISSSNDDCIVLYDMQEGKPSRTLF
SKKYGVDLIRYTYGDSNTVVYTSNKLDDTIRYLSLTDNKYIRYFPGHSARVTALSMSPVD
EMFISSSLDKTIRIWDLRTPDCQGLTNPLGRPICSFDPDGLIFAAGVESRAIKLYDLRAF
DKGPFANFETRFNRVCDWTGLKFSNDGKQILIYTNGGAIRILNAFSGSVLHTFSGYNNST
GMALEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDGKHPGPINTLQFNPRFMTFAS
ACTNMTFWLPCDEDL
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagatcacagacagcgtgttgaggagtttcagggtcgccaggacgtatcgatgcaat
tcagagaaggtgaactgtttggattacagcccaaacggagagagtgtcatatccagcagc
aacgatgactgcattgtgttgtatgacatgcaggaggggaaacccagcagaaccctgttc
agcaagaagtatggagtggacctcatccgctacacctatggagactccaacacggtggtg
tacacctccaacaagctggacgacaccatccgatacctgtccctcactgacaacaagtac
atccgatatttcccgggtcacagtgcgcgggtgaccgcactctccatgtctcctgtggat
gagatgttcatctccagctccttagataagaccatccgcatctgggatctgcgcactcca
gactgtcagggtttgaccaatccacttgggagacctatatgttcctttgacccggatgga
ctcatttttgcggcgggggtggagtcccgggccattaagctgtatgacctgcgtgctttc
gacaagggcccctttgccaactttgagacccggtttaaccgcgtctgtgactggaccgga
ctgaagttcagcaatgacggcaaacagatcctcatctatacaaacggaggcgccattcgc
atcctgaatgctttcagcggttctgtgctgcatacattttcaggctacaataacagtacc
ggcatggctctcgaggcctgcttcactccagactcgcagttcgttatgatcggctcagag
gacgggagagttcacgtctggagcacagagagcgggatgaaggtggccgtgctggatggg
aaacatccaggacccatcaacactctgcagtttaaccccagattcatgacattcgccagc
gcctgcacaaacatgacattttggctcccgtgtgatgaagacctgtaa

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