Oryzias latipes (Japanese medaka): 101173901
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Entry
101173901 CDS
T02443
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03030
DNA replication
ola03410
Base excision repair
ola03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101173901 (pole2)
03410 Base excision repair
101173901 (pole2)
03420 Nucleotide excision repair
101173901 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ola03032
]
101173901 (pole2)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101173901 (pole2)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101173901 (pole2)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
101173901 (pole2)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
101173901 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
PigL_N
Motif
Other DBs
NCBI-GeneID:
101173901
NCBI-ProteinID:
XP_004082240
UniProt:
H2MC38
LinkDB
All DBs
Position
22:complement(6715808..6721175)
Genome browser
AA seq
528 aa
AA seq
DB search
MDLPRKIKAKVTAGFKMRGLILRPEASRYLAEVLESVNVSELEDVIEKVLDSVEKQPLSS
NMIELAVVESAVQDCTQSCDETIDNIFNIIGAFDVPRYIYSVERKKFLPINMTGHPAPSL
CGSAKDKAELFRERYTILQQRTHRHELFTPPAIGAAVEEGQNKFQLKTIEALLGSTSKLG
EVIVLGMITQLKEGKFYLEDPSGTVQLDLSKAQFHNGLYTESCFVLAEGWYEDSVLHVNG
FGFPPTEPSSATRSYYGNINFFGGPSSTSVKASSKLKQLEEENEDAMFVIVSDVWLDSVE
VMEKLNIMFSGYAAMPPTCFILCGNFSSAPYGKTQNRSLKESLKALADMICTYPSIHSSS
RFVFVPGPEDPGPANILPRPPLVQNITEEFSERVPFSVFTTNPCRIQYCSQEILVIREDL
VNKMCRNCIRLPNSNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYSLRVYPVPDVVV
FADKYDPFTITNTDCLSVNPGSFPKSGFTFKVYYPSNKTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatttacctcgaaaaataaaggctaaagtgacggctggtttcaagatgaggggactt
atacttcgacctgaagccagtcggtatcttgctgaagtcctggaatcagtcaatgtctct
gaacttgaggatgtcattgagaaggtgctggattcggtggagaagcagccgttgtcctcg
aatatgatcgagctggctgtggtagaaagtgctgtacaggactgcacccagtcatgtgat
gaaaccattgacaatatttttaacatcattggagcctttgacgtgcccagatacatttac
agcgtggagagaaagaaatttctacccatcaatatgaccggtcatccagctcccagtctg
tgtggttctgccaaagacaaagcggaacttttcagggagcgctatacaatcttacagcag
cgcacacaccgtcatgagctcttcaccccaccagcaattggagctgctgttgaagagggt
caaaataaatttcagctcaagacaattgaagcgttgctcgggagcacatctaagcttggg
gaggtgatcgtactcgggatgatcacacaacttaaagagggtaaattttacctcgaagat
ccaagtggaaccgtacagctggatttgtccaaggcacagttccataatggcctctataca
gagtcctgctttgttttggcagaagggtggtacgaggattctgttcttcatgtcaatggc
tttggtttccccccaacagagccgtcatcggcgaccaggtcgtactacggcaacataaac
ttctttggcggtccatcgtccacgtccgtcaaggcttcctccaagctcaagcagctggag
gaagagaacgaagatgccatgtttgtgatcgtctctgacgtctggctggacagcgtagaa
gtgatggaaaagctcaacatcatgttttcaggatatgctgcaatgcctcctacctgcttc
attttgtgtggaaacttctcttcggccccatatggaaaaacacagaatagatcgctgaaa
gaatccctgaaagccctggctgacatgatctgtacatatcccagcattcacagcagtagt
cgcttcgtgttcgttccgggtcctgaggaccccggtccagcaaacatcctgccgaggccc
cccctggtacaaaacatcacagaggagttcagtgagagagtgccattctcagtttttacc
accaacccatgcaggatccagtactgcagccaggagatcctagtgatcagagaggatctt
gttaacaagatgtgcaggaattgcatcaggttacccaacagtaaccttgacatcccaaac
cattttgttaagacgatcctgtctcagggtcatttgactccgctgcctttgtacgtcagt
cctgtgttctgggcctatgactactccctgcgcgtctacccggtgcctgatgtcgttgtc
tttgcagacaagtacgaccccttcaccatcaccaacactgactgcctcagtgtcaacccg
ggctcattccctaaaagcggcttcacattcaaggtgtattacccgtccaacaaaactgta
gaggacagtaaactccaaggactctaa
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