Oryzias latipes (Japanese medaka): 101174024
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Entry
101174024 CDS
T02443
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X2
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
ola03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101174024 (rnps1)
03015 mRNA surveillance pathway
101174024 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101174024 (rnps1)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101174024 (rnps1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_3
RRM_occluded
RRM_7
RRM_5
RBD_AKAP-17A
PNISR
RRM_MUD2_C
LPD16
Motif
Other DBs
NCBI-GeneID:
101174024
NCBI-ProteinID:
XP_004071471
UniProt:
A0A3B3I2W1
LinkDB
All DBs
Position
8:complement(11024871..11027308)
Genome browser
AA seq
273 aa
AA seq
DB search
MAPLPIKRKEDEKKNREKEKIKEGDKERGRDKAKKRRSASSGSSSRSSSSSSSSSGSSSG
SSSGSSSSSSRSGSSSSRSSSSSSSSASPSPSRRRHDNRRRSRSPSKTQKRGEERERRKR
SPTPKPTKVHLGRLTRNVTKEHIQEIFSTYGKIKAVDMPVERLFPNLTKGFAYVEFETPE
EAQKALKHMDGGQIDGQEITAAAVLTQLIRGPPRRLSPPRRMPPPPPMWRRSPPRMRRRS
RSPRRRSPPRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcaccattaccgataaagcgaaaggaagatgaaaagaaaaacagggaaaaagaaaaa
ataaaggaaggagacaaggaaaggggtcgcgacaaagcaaagaaacgccgcagtgcttca
tcaggcagcagcagcagatctagctcatcctccagcagcagctctggttctagctctggt
tcttcaagtggttccagctcctcttccagtcgctccggatcctctagctctcggtcttcc
tcctcctccagctcttcggcctctccaagtcccagccgcagacgccatgacaaccgacgc
cgttcacgatctccttctaaaacacagaagagaggagaagaaagagaacgaagaaaaaga
agtcccacccctaaacccacaaaggttcacttgggaaggctgaccaggaatgtaaccaag
gaacacatccaggagattttctctacatatggaaaaattaaagcggttgacatgccggtg
gaaaggctcttcccaaacctgaccaaaggctttgcttacgtggagtttgagacccctgaa
gaagcccagaaagctcttaaacacatggatggaggtcagattgacgggcaggaaatcact
gcagctgctgtgctgactcagctgatccgtggtcctccacgtagactgtctcctcctcga
agaatgccgccacctccaccgatgtggcgccgcagcccaccacgcatgagaagaagatca
cgctccccaaggaggcgctcgccaccacgtcgccgctctcgctctaggtctcctggccgc
aggcgccatcgctctcgttcaagctcaaattcctccagatag
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integrated database retrieval system
