Oryzias latipes (Japanese medaka): 101174037
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Entry
101174037 CDS
T02443
Name
(RefSeq) far upstream element-binding protein 3
KO
K13210
far upstream element-binding protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101174037
03041 Spliceosome [BR:
ola03041
]
101174037
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101174037
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101174037
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_Vigilin
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
101174037
NCBI-ProteinID:
XP_023816464
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All DBs
Position
12:12232662..12253291
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AA seq
557 aa
AA seq
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MMMMAELIQGQASVAQPGTKDDFADMIRRVRQVAAKMGGDQMPNMNSSAVIDPSLYGFVS
QNRSLDNGVGNHLGAMVHQRALTTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIAS
DSGGMLDRPCTLTGSPENIEQAKRLLSEIIEQCRYGPGFHNDMDGNGSIQQMLIPANKVG
LVIGKGGETIKQLQERTGVQMMMIQDDPMPTGADKPLRITGDPLKVQQARELVVKLIRDK
DQGDFRTGRAEFGSKMGGTSLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGI
SPDRVAQVMGQPEHCHHAVHLINELVQTAQERDGYGVMGRRGRVDCNTGGAGGLQEVTYA
VPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPSTDPNVRIFSIRGTPQQLEKARQL
IDERIGGPGIGGNSNFSMNLYNQGPTTPPQHGPQPFMTGGWGTTFQIWQPQGQQDHNHNG
SQTGQMDWEQYYKKLGQQNQPQNSAPEYNKVWGQTAGPATQQTSNPDYNAWVDFYRQPMA
FFNQGSQQTQAPGLQDH
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctgattcagggacaggcctcggtggctcagcctggaacgaaa
gatgattttgcagacatgatacgccgggtccgacaggtggccgccaaaatgggaggagac
cagatgcccaacatgaattcgtctgcagtcatagacccctccctctatggctttgttagc
caaaaccgttctcttgacaatggagttgggaaccatcttggtgcaatggtacatcaaagg
gctcttactacagaagacttcaaagtgcctgataagatggtgggatttattattggaaaa
ggaggagagcagatctctagaattcagcaggaatccggttgtaagatccagatcgcttca
gacagtggaggcatgctggacagaccctgcactctgactggaagcccagaaaacatcgag
caggccaagagactgctgagcgagatcatcgaacagtgccgctacggtcccggcttccac
aacgacatggacggaaacggttccatccaacagatgctcatccctgccaataaagttggc
ctggtcatcggcaaaggcggagagaccatcaaacaactgcaggagaggacaggtgtgcag
atgatgatgattcaggacgaccccatgcccaccggagccgacaaacccctgagaatcacc
ggggatcctctcaaagtgcagcaagcccgtgaacttgtggtgaaactcatcagggacaaa
gaccaaggagacttccggactggaagggcagaatttggatccaaaatgggtggaactagt
ctggatgttgtagtaccaagatttgcagttggcataatcattggcaggaacggagagatg
atcaaaaaaattcaaaatgatgctggcgtcaggatccagttcaaacaagatgatggaatc
agccctgaccgtgttgctcaggtgatgggccagcctgagcactgccaccatgctgttcac
ctcatcaacgaactggttcagacagctcaagagcgagacggctatggcgtgatgggccgc
agaggacgggtcgactgtaacactggaggggctggaggacttcaagaagttacttatgca
gttcctgctgataagtgtggccttgttattggaaaaggtggagaaaccataaagaacatc
aaagagcagtctcgtgctcacgtggagctgcagagaaacccaccgcccagcactgacccc
aatgtgcgcatcttctccatcaggggcaccccgcagcagttggagaaagcccgtcaactg
atcgatgagagaattgggggtccaggaattgggggtaacagcaacttcagtatgaatctt
tacaaccaaggaccaaccacccctccccaacatgggcctcagccgttcatgactggagga
tgggggacaacttttcagatctggcaacctcaaggccaacaggaccacaatcacaatgga
tcccagacgggccagatggactgggagcagtattataaaaagctaggtcagcaaaaccaa
ccccagaactctgctccggaatacaacaaagtctggggccagacagctggtcctgccact
cagcagacttctaatcccgactacaacgcctgggttgacttctacaggcagccgatggcc
ttcttcaaccagggctctcagcagacacaagctcctggcctccaggatcactaa
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