Oryzias latipes (Japanese medaka): 101174050
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Entry
101174050 CDS
T02443
Symbol
cic
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101174050 (cic)
Transcription factors [BR:
ola03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101174050 (cic)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
101174050
NCBI-ProteinID:
XP_023820185
LinkDB
All DBs
Position
16:21100967..21140500
Genome browser
AA seq
2702 aa
AA seq
DB search
MRPLKKNRGRSPSLTRGRGGRRKVGSHALHEKDSKKVKKEMSVKAAQHTPNIPLKRKRSP
PTVPNSIEQPITLSNINMKEEPTKLRNHTESQKNEAKKAEEGTQKDKTVGTNGNSSLPTA
SVAFPTSLPALQPQATNHSPSIGSISSRKTATFKARIPKKKYTYEHFANNASVMTSIPTS
SPALIQNSYCDINSKVSNTANTKDNNFKNSKDFSSHVNQSFNFRICTSTNSNTICGTTTS
KTSSSTSSVGSYSTYINSKSNNCSGNPLSVLTVDSKATEVNRIVFVDDKTLRTANAQEKE
AQGGENAVDGTPNSVRSYSTDTASEHSADLDVIEATGPSTHILSPLHNAQQQEMSLSEGL
AETLAKGMKNQRVLARQKNRTVEAVRNGDGCHPSSVFSPGLVRRVSGETVEIVLHGEDTL
VKYPFHGGPMTSPSRTERIVDFILDTPPPGTAPVAVGTRVCVPFGGEEGGCLFYREGIVA
RVDPHPGVSFPYQVLLNEESESRRASEETEKSKVNGKGVWVSRQSLRLLAPPWEVSHLDG
GGAKEREREREREERERREEMEVEREVCQLSIGMGVLGGHDFSHDGGTGVHSFGPSSSSV
TSSVVVITDPGCGDGFSERQREKKMATPEEDVEVSHFNRVHTAGPKPNPPHPRNITSKAS
DHPTFSPHLSVVGGLGPPNLSTISNPQPTPSPVLQISEMNSIQTNLPPLKTTPTQTPTPT
SSVGSSSASSRCRTPLSLAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSREGCMKESQRR
GYCSRHLSMRTKEMEAAGGEKGGGGGNSSGTVTPSDLLRQASSEFEWDETSRESSEISSR
GDSRPRLVLPSLLPHELSSRFDFDECEAATMLVSLGSSRSGTPSFSPISNQSPFSPAPSP
SPSPLFGFRPANFSPITASPVLQHRRPRQPSGTGGGGGGGGSSKVAIPGGGAEREKHPSG
IHSSFHNNLTFTVPMSPNKRKPDAPPPPTLPTHHHDYTPKTELEQVDLNNSFRVLSPQTP
ASHSRSHTPTFSRPKGGTTLSASRPSSSTAVSPPPLLVSPTPPSTLSTEGGPRRVVHVSQ
QTLRDSPVIVRNPEVPLTKFTETPMGRGGGADEGETDSTSSQDVAPTPLNSHPVSGLQVP
VPINRAAATVPNNAVLLRSPAQTLLLVSPTPSALPGFDPSAPVPQTLSVTVSTTVSAAAT
TDTDSSGEREDNRGSGFGTGVQQPVPCHPSPTALLPLILPAESLHPVPRKDIIMGRPGTV
WTNVEPRSVPVFPWHSLVPFLAPTQSDASPQPEEGQHPVNHPQAASLKTECHGAASLSQE
PTEVPPTVERVPPTRPLPSSYEPLPEKEKGDAERERPDSETESDVDDPFLPGVVPEPPIT
TSPVKRRTQSLSALPKDGDKNSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRT
VSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEGRGVPGAKD
IRERSMSESTEPHSVELKGVGPGLVGVSERSTAEEHVGQLTRPRAFSQSAMHSLGDRGSN
TQALAELAQMCGERGGQFSSHAPSLSQNQRGVSEDMTSDDERMVICEEEGDDDVIEDPYP
SSSIDLKCKERVSDSDSENASGDEGGRKRVFAPVICSSASSSSSHHTPHGRSVSLSSYPS
SKRYDEGRSGGGGLSDHRRKERREGEGKDNFVVEGGRSVQAPPLSLSSGHSVISTSLAGG
PPPSSAGSLGTNPLLGIGTVRVASTAVTNVMRPVISSPLPIASKPREGGSSSSPHPPERK
SLTPQQQPQLLFSPGVGGGAAATGGGYYSSSSPNPAGAGGVVTNLVLGGALPAQSAVQLI
TPSPPSQLPHQQALPSTAVSATHSQSNGPLPVPLIQPQFLPASSLAPPGGKAITQVQYIL
PSLPTNTNPKSPPQQLSQPTSIFNLPTAPPTHVSLSNGKQQGASLPAGAVGVVSPGSRVQ
TQSPVLQGKMLVPMATIRTAPAPVQQFPIVTPPLPVQNGAQSGSKIIQIAPMPVVQSQLP
QGGAVHPASAFPVTVGTAAVVAPGSAPSQTVLLPQAPTRITYVQSTPGIPSTLPLVSTTT
GSSSSQQALPVPGSAYVPSPLATLGFTAIASPGHTLVQPLIAGQPPLLAAAQTPQPPTSA
PAAGSGSPIVTAIYPPSPSVTMATGVVSMAAVPPSVAYTVSSSSSVSTQILPKHPPTLSA
VAPHPQPHPDRQADRQPPADRPADRQNDRQAELPAHSERQLDRQLHTSSSGSSVAPPGGS
AVSLRPCSPALQIQIPGNPPGTPKLLQPPVRNPHKVKATIATIPVGSYDGGGRGKDRERD
KEKEREKDKEAGRETASNSHFSFDPEPLRQTGSPSAPPTEEPTSLDRPLEGSSTTDSADT
RNRESTTTKEAAWKEQESLPSPPLPPPSTTEPALPPPQTDKDTLTPKRIKARPPPLKKTF
DSVDKTGRVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDL
DSATDEQLSPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRAATDGEDILAELEFEKVP
YSSLRRTLDQRRALVMQLFQEQGFFPSAQATAAFQTRYSDIFPTKVCLQLKIREVRQKIM
QTATPSDGSGLGPSDSSFSLPGPSGSHSGDGSGRGGDLQDDEAEQGAQASPEKPRDPHES
AR
NT seq
8109 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgttgaagaagaaccggggacgctcaccttcgttaactagagggagaggtggg
aggaggaaggtgggatctcatgcactccatgaaaaagactccaaaaaagtcaagaaggag
atgtctgtcaaagctgcacagcacacacctaacattcccctgaagcgaaaacgctcccca
cccactgtccccaactccattgaacagcctatcacgttaagcaatataaacatgaaggag
gagcctactaaacttaggaaccacacggagtcacaaaagaacgaggccaaaaaagcagaa
gaagggacgcaaaaggacaaaacagtgggcaccaatggaaatagttctttacccacagct
tctgtagcatttcctacctccctgccagcgctgcaacctcaagccaccaaccacagtccc
agcataggctccatctccagcaggaaaacggccacattcaaggctcgaatacccaagaaa
aaatacacctatgagcactttgctaacaatgcaagtgtcatgactagcattcctacctcc
agccctgcactcatacagaacagctactgcgatattaacagtaaggttagcaacactgca
aatactaaagataataacttcaagaatagtaaggattttagttcccacgttaaccaaagc
tttaattttcgcatctgcacaagtactaacagtaatactatatgtggaactactaccagt
aaaacaagcagtagtactagtagtgtggggagctacagcacctatatcaatagcaaaagt
aataattgctcaggtaatccactgtcagtgctgactgtggacagtaaagctacagaagtg
aacaggatagtttttgtggatgataaaaccctcaggactgcaaatgcccaggaaaaagag
gcccagggtggggagaacgcagtagatggaacccctaactcagtgcgttcctactccacc
gatacagccagtgagcactctgctgacctggatgtaatagaagcaacaggaccaagcact
catatcctatctccactccacaatgcccaacagcaagaaatgagtctttcagaagggtta
gctgaaactctggctaaaggaatgaaaaaccagagggtgttggctcgccaaaaaaacagg
actgtagaggctgtcagaaatggagacggatgccacccatcttctgtattcagcccaggg
ctggtgcgaagggtgagtggagagactgtggaaattgttctccacggagaagacaccctt
gttaaatacccttttcatggcggaccgatgacgtcaccctcacggactgaaaggattgtg
gatttcattttggacacccccccacccggcacggcccctgtggctgtcgggaccagagtg
tgtgtgccgtttggcggagaggaagggggttgtctgttttacagagagggaattgtagcc
cgggtggacccccaccctggtgtctcgtttccgtaccaggtgctcctgaatgaagaaagt
gaaagcagaagggcgagcgaggagacagagaaaagcaaagtcaacggaaaaggtgtgtgg
gtgtctcgacaaagcctgcgactgcttgctcctccctgggaagtctcacatttagatggt
gggggggcgaaggagagggagcgcgaaagggaaagggaggagagggagcggcgggaggag
atggaggtggagagggaggtctgccaattgagtattgggatgggggtgctagggggtcac
gatttctcacatgatgggggtacaggggtacattcttttggaccatccagctcctctgtg
acttcgagcgtagtggtcatcaccgaccctggatgtggagatggattctctgaaagacag
agggagaagaagatggccaccccagaggaagacgtggaggtatctcattttaacagggtc
cacacggctggtccaaaaccaaatcctccgcatcccagaaatattacctccaaagccagt
gaccaccccactttctccccgcacctctctgtagtggggggtcttggaccacccaatctc
tccaccatttcaaatcctcagccaacaccttctcctgtcctacagatctctgaaatgaac
agcatccaaacaaacctacctccactaaagaccactcccactcagacccccacacccact
tccagtgttgggtcttcctctgcctcctctcgctgccggactcctctttcattggctcaa
cagaagtacaaaaagggggacgtggtgtgcacgccaaatgggattcggaagaagttcaat
ggaaagcagtggaggaggctgtgctccagggagggctgcatgaaagagtctcagcgtcgc
gggtactgctctcgacacttgtccatgcgaaccaaggagatggaggcagcaggcggagag
aaggggggaggagggggcaacagctcggggacagtcaccccctcggaccttctgcgacaa
gccagcagtgagtttgagtgggacgagacatccagagagagcagtgagatcagcagcaga
ggagactccagaccgcgcctggtcctcccgtccctccttccccatgaactgtcgtcacgc
ttcgactttgatgagtgtgaggctgccaccatgctggtgtcgttagggagctcccgctcc
ggaaccccctccttctcccccatctccaaccagtcacccttctcccctgccccctctcct
tcaccctcccctctgtttggtttcaggccggctaacttctcccccattacagcctcccca
gtcttgcaacaccgaaggccccggcagcccagcggcacggggggaggaggaggagggggc
gggagcagcaaggttgcaatcccaggtggaggtgcagaaagggaaaaacacccttcgggt
atccactcgtccttccacaataacttaacgtttaccgtcccaatgagccccaacaaaaga
aaacccgacgcacccccaccaccaacgctccccacccaccaccatgattatacccccaaa
acagagctggagcaggtggacctcaacaactcttttagggtgttgtccccccaaacgccc
gcatcacattcccgcagtcacacacccactttctcccggcccaaaggagggaccaccctg
tctgctagcaggccttcatcctctacagccgtctcccctcctcctctgctagtgtcccca
acccctccttctaccctcagtacagaaggggggcctcgtcgtgtagtccacgtctctcag
cagacgttacgggactcccctgtcattgtaaggaatcccgaagttcctctaacaaaattt
acagagactcccatgggaagaggaggaggtgcggatgagggggaaacagatagcacttca
tctcaagacgttgccccaacccccctcaattctcacccagtttctggtctgcaggttcca
gtcccaattaaccgcgctgcagccacagtaccgaataacgccgtcctcctccgcagccca
gctcaaacactcctgctggtgtccccaacaccttccgccttgccggggtttgacccctct
gcccccgtcccacagaccctatcagttacagtaagcacaacagtttcagctgctgccaca
accgacacggactcttctggagaacgagaagacaacagaggcagcgggtttgggacagga
gtccagcagcccgttccgtgccatccttcccctacagctctgcttcccctgatcctgcca
gcagaaagtctgcacccagtcccgcggaaggacatcatcatgggacgtcctggtacagtg
tggaccaatgtagagccccgctcagttccagtcttcccttggcattcattggttcctttt
ctggcaccgacccaatcagatgcttcccctcagccagaagagggccagcacccagtcaac
caccctcaagctgccagcctaaagacagaatgtcatggggcagcatcactttcacaggag
cccaccgaggtgcctcccactgtagaaagagttcctccaactcggcctctcccttcctct
tatgagccgcttccagagaaggagaaaggagatgcggagagagagaggcccgacagtgaa
actgagagtgacgtggatgacccgttcttaccaggagtggtacctgagccgcccatcacc
acatcaccagtaaagaggcgtacccagtctcttagtgcactacccaaagatggagataag
aacagtccaggaaaaagagaaaaggaccacatccggcgaccaatgaatgcattcatgatt
tttagcaagcgtcatcgagccttagtgcaccagcgccacccgaaccaggacaacaggaca
gttagcaagatccttggagaatggtggtatgctctgggaccaaaagagaaacagaagtac
cacgacttggccttccaggttaaagaagcccattttaaagcccacccagactggaaatgg
tgtaacaaagacaggaagaagtccagctctgaaggccgtggagtccccggggccaaagac
atcagagagagaagcatgtctgaatccacagagcctcattctgtggagctgaagggtgtg
ggtccaggtttggtgggtgtctctgagaggagcacagcagaggagcatgttggccagctc
acccgtcctagagccttctctcaaagtgccatgcacagtctgggtgacaggggcagtaac
actcaagccctggcagaactagcacagatgtgtggtgaacgtggcggtcagttttcaagc
catgccccttcactctcacagaaccagcgaggcgtcagtgaggacatgaccagtgacgat
gagcgcatggtcatctgcgaggaggagggggacgatgatgtcatcgaggacccttatcct
agcagttccatagatctcaaatgtaaggagcgagtgtctgacagcgacagtgagaacgct
tcaggagatgaaggtggtcggaagagagtttttgctcctgtcatctgctcatctgcctcc
tcttcttcatcacatcacaccccccatggcaggagtgtctcactgtcctcttacccctca
agcaaacgctatgatgaggggaggtctggagggggagggctttcagatcacaggaggaag
gagagaagggaaggagaaggaaaggacaattttgtggtcgagggtggcagaagtgtgcag
gcccctcctctctccctctcctctggtcattcagtaatttctacatcactagctggaggg
ccccctccctcgtcggcaggttctttgggaacgaaccctctcctgggtattgggactgtg
agggtggcgtccacagcagtgaccaacgtgatgcgtcctgtaatcagctcacccctcccc
attgccagcaaacctagagagggaggctcttcatccagcccccacccccctgagaggaaa
tccctgactccccaacagcagcctcaacttctgttcagtccaggggttggaggcggggct
gcagccacagggggtgggtactactcgtcatcctcgcccaatccagcgggtgcaggcggt
gtagtcactaacttggtgttaggaggagctctgcctgcacagtcagctgtccagctcatt
accccctcccccccttcccagctaccgcatcagcaagccctcccctccacagctgtttca
gccacacacagccaaagcaacgggcccctgcctgtgcctctaattcagccccagttcctt
cctgcttcctccttggctccccctgggggtaaggccatcacacaagttcaatacattctg
cccagtttacctaccaacaccaaccccaagagcccgcctcagcagctcagccagccaacc
agtatcttcaacttacccacagctccaccgacacacgtgtcgttgtccaatggaaagcag
cagggtgccagtctgccagcgggggcggtgggtgtggtcagtcctggatctagagtgcaa
acacagtctccagtgctccagggtaaaatgctggttcccatggcaacaataaggactgca
ccagcccctgtccagcagtttcccattgtgactccacctcttcctgtacagaatggtgct
cagtctggaagcaagatcatccagatcgctcctatgccagtggtccagtcccagctccct
cagggaggagcagtgcatcctgccagcgctttcccggtaacagtgggcacagccgctgtg
gtggcacctggatcggccccttcccagacagtgctgctgccacaggcgcctactagaatc
acctatgtccagtccactcctgggatcccatctactctgcccttagtgtccacaacaacc
ggctcttcctcttctcagcaagctcttcccgtccctggatctgcatatgtcccatcgcca
ttagcaacccttggcttcacagccatcgcttcacctggacatacgctggttcagccacta
attgcaggtcagccaccactcctagctgctgctcagaccccgcagccccccacctcagcc
cctgctgctggttctgggagcccgatagtcacagccatctaccctccttcaccaagtgtc
accatggcaacaggggttgtttccatggcagcagtgcccccaagtgtggcctacaccgtc
tccagctcatcaagtgtttccacacaaatcttgcctaaacacccacctaccctgagcgct
gtcgcgcctcatccgcagccccatccggacagacaagcggaccggcagccgcctgcggac
aggcccgccgatcgacaaaatgacaggcaggccgaactgccagcacactcggagagacag
ttagacaggcagttgcatacctccagcagtggcagctcagtggcaccccctggtggctca
gcagtgtctttaaggccttgcagtcctgcccttcaaatccaaattcctggcaatccacca
ggtacgcctaagctgttacagcctccggtcaggaaccctcacaaagtaaaggcaaccatt
gcaaccatccccgtggggagttacgacggaggaggcagaggaaaagaccgggagcgtgac
aaggagaaggaacgggaaaaggataaggaggcgggcagggaaactgccagcaacagtcat
ttttcctttgatcctgagccgctaaggcagacgggttctccctcagctccgcccacagag
gagcccacgtctttagatcgacctctggagggctccagtaccacagactcggccgacacg
cggaacagggaaagcacaaccaccaaagaggctgcatggaaggagcaggagtccctccca
tccccccctctcccccctccatcaaccacagagcccgctttaccacctccacagactgac
aaagacactctgacgcccaaaaggattaaagctcgtccaccaccgctaaagaagaccttc
gactctgtggacaagactggcagggttctttcagaggtatactttgaggaacgcttcgct
gagctgccagagtttcgaccagaggaagttctgccgtcaccgaccttgcaaagtctggcc
acttcaccccgtgccatcctgggaagttatcggcgaaagaggaagaactcgacagatttg
gattctgccactgatgagcaactctcaccaaagagaaaaagtcggcggcgatcaagctgt
agctctgaaccaaacacgcctaaaagtgccgccaagtgtgagggggacatctttactttc
gacagagcagccactgatggggaagacatcctggctgaactggagtttgagaaagtgccg
tactcctccctgaggcgaactctggatcagaggagagctctcgtcatgcagctgttccag
gagcagggcttctttccatcagctcaggccactgcagctttccagacgagatactccgac
atctttcccaccaaggtgtgcttgcagctgaagatcagggaggttcggcagaagatcatg
cagacggcgactccctccgatggctccggcttggggccatcagactcctccttctctctt
cctggaccgtccggctctcactcgggggacggatctgggcgaggtggagatctacaggat
gacgaggctgaacaaggagcacaggcgagcccagagaagcctcgtgatccccacgagtct
gctagatga
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integrated database retrieval system
