Oryzias latipes (Japanese medaka): 101174195
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Entry
101174195 CDS
T02443
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X2
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101174195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101174195
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
101174195
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101174195
NCBI-ProteinID:
XP_004072391
UniProt:
A0A3B3HVP3
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Position
9:11161388..11213199
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AA seq
454 aa
AA seq
DB search
MSSNYSVILLGPAPWGFRLQGGKDFNMPLTISRLTNDGKAAKGGIAVGDVVLSIDGISTD
GMNHLEAQNKIKNCSSNLSLTLQKASSVQKPPPVTPKTGASPLVTNGPHSILKKPQQHPP
RAPRKHIVDTDIHFYHVPSHGDASRKRIMEDTEDWRPRSGTTQSRSFRILAQITGTESAQ
KEEDDSAKKNNGQSEEPELNSHECAVVKTMIKRPPPTRIQSGHSPHTGLITPTFGIKGNE
VQRGPVPARPVPQPHPKDEDSLVQMAEHIPAGTRTPMCAHCNIVIRGPFLVAMGKSWHKE
EFNCAYCRTSLADIGFVEENGCVYCEHCYEEFFAPTCSRCQAKILGEVINALKQTWHVYC
FLCVTCQQPIRNNTFHLEDGEPYCEQDYYSLFGTSCHGCDFPIEAGDTFLEALGYTWHDT
CFVCAVCCSTLEGQTFYSRKDKPLCKKHANTLKI
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactacagcgtcattctgttgggccccgccccctggggcttcaggctgcaa
ggaggaaaggacttcaacatgcccctcaccatctcgaggctgacgaacgatgggaaggca
gctaaaggcggcatagctgttggagacgttgtgctttctattgatgggatctctacagat
ggcatgaaccacctggaggcccagaacaaaatcaagaactgctccagcaacctcagcctt
accctgcagaaggcctccagtgttcagaaaccacctcccgtgacacctaagactggtgct
tctcctctagtcacaaatggccctcatagtattttaaaaaaacctcagcagcatcctccg
agagctcccaggaaacatattgtggacacagacatccatttttaccatgtaccttctcac
ggggacgcaagcagaaagcggataatggaggacacagaagactggcggccacgctcaggc
accacccaatcgagatcctttaggatcctggctcagataacaggcaccgagagcgctcaa
aaagaggaagatgattcagccaagaagaataatgggcagagtgaggagccagagctgaac
tctcatgagtgtgctgttgtgaagactatgatcaaaagacctcctccaacccggattcaa
tcaggccacagtccacacacaggtttgattactccaacctttgggataaaaggtaatgag
gtccaaaggggtcccgtcccagcccgacctgtgcctcagcctcaccccaaagacgaggac
tccctggtccagatggcagaacatatccctgctggaactcgaactcccatgtgtgcccac
tgtaacattgtgatcagggggccgtttttggtagcgatgggaaaatcatggcataaggag
gaatttaactgtgcttactgccgcacgtctctggcagacataggctttgtggaagagaat
ggatgtgtgtactgtgagcactgctatgaagagttctttgctccaacatgcagccgctgc
caggccaaaatactgggggaggtgataaatgccctaaaacagacttggcatgtctactgc
ttcttgtgcgtcacctgtcagcagccgatcaggaacaacaccttccacctggaggatgga
gagccttactgtgagcaggactattacagtttgtttgggaccagctgtcatggctgcgac
tttcccattgaggctggggatacgttcctggaggcgcttggttacacttggcatgacacc
tgctttgtttgtgctgtgtgctgttccacactggagggtcagacgttctattcaagaaaa
gacaaacctctttgcaagaaacatgccaatacacttaaaatatga
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