Oryzias latipes (Japanese medaka): 101174258
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Entry
101174258 CDS
T02443
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101174258 (hps3)
Membrane trafficking [BR:
ola04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
101174258 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
101174258
NCBI-ProteinID:
XP_011472504
UniProt:
A0A3B3HBK6
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All DBs
Position
4:complement(18822274..18840168)
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AA seq
1077 aa
AA seq
DB search
MVHVYNCHPFKSQQIVQVEQEPGLVCCGGGALFVVATGGCKVEVYNLEKEGCPLFCRFAT
MGTVKSIQHSKIGDYLVTIEEKNNATYLRAYTNWRYQAEEKGRVGVRLLGHLLGGASVWG
GVQMEIIEIPMSERPIAVSCCPVTGDLLVGCEKTVVLFTLSRQNQQNLQNQSQQSVQNSL
PNSQQSCNPSQGPTSVSHPNLSILDFERSVILHLPKMSLKQVALCGGYVAVNAELEVLVL
KLEAASDPAAAEEPLETSKSAAEPPQDQDDFLLIPRHQELLESKAKDCDILVTMEKTGLE
DQAQYQFSYILFRRFSPEFFQGCRVEEMQIHSLQLYPLFTSNSLEDPTCVFCFFSLPTAG
YLYSLKGGVELLSAYQYPEKVLQAVMSDHLLHVITKNALQCFTVRCSAVAARMEDPYIDT
TMKACPPSTLEVCALRIQLFIGLRSVCVYNQRVILLSAADTETQQEPERRCLKLKENSVL
TGIFLAVGIDPATTPALENLLSRPFLSRKWTISSPKETSTVGHGWNLYVVDTVHPFTLYQ
EMVEYSCRYVQTTPQSHSLRHLLSEAHLLLRACLLQTPEQKQSGQGDPAVSSKPGSNGAV
DKNSATQANRQELEEALRQNSAQLGDCFSRASQKDCHLALPYYKMSGLTVAEVISRNRPP
PEGPSSYGLGFLFYLKLHLLEETEQHLTQEEADEIIYIFSQSEPFLLVSVCASPCMINCS
ATRTLQILQRLEDTAGVSVPLTIIMAAMALRLGKQQDYTELMERHAEMQLVYGFIEEPRL
LLHGGGGGGGGGGGGQHSQVHPTSLARQLANTQPGLLVAAMVALHENCKVQLEQADFVFK
ELGCENTLLVDFWEAMLMASSQDAVIQELLFRVASVYIDRLTNSINGSGAPKYKSLKGAD
DLITSCSHYGALYPWLTVLNPTHSTTSEHQEALHKLQSLLCGPSLSVGSIVPLLERLSGE
TLWGFSLHLLCATRRGQYESSIEQLLDRCPQAIIAYANHQLQDKYMTLWWQKLLPELCKR
TRAAADNGILLGALKETLVVVAMETSPAEFLELIPDDGTASYFLPHLLTCSQRHLMA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacgtctacaactgtcatccgttcaagtcccagcagatcgtccaggtggagcag
gaacctggactggtctgctgtggaggcggagccctgttcgtcgtggctactggaggatgc
aaggtggaggtatacaatctggagaaggagggctgccccctgttctgtcgcttcgccacc
atgggcacagtaaagagcattcaacacagtaaaataggagactacctggttactatagag
gaaaagaacaacgccacttacctgagagcttacaccaactggcgctaccaggcggaggag
aagggtcgggttggggtgcgcttgttgggccacctgctgggtggagcgtcggtgtggggc
ggagtgcagatggagatcattgagatcccaatgtcagagcgtcccattgctgtttcgtgt
tgccccgtcaccggggatcttttagtcggctgtgagaagactgtggttctctttaccctg
agcagacagaaccagcagaacttgcagaatcagagtcagcagagcgttcagaactccttg
ccaaactctcaacagagctgcaatccgagccaaggaccaacctctgtatcacatccgaat
ctttccattttggactttgagcgttcagtcatcctgcatcttccaaaaatgtctcttaaa
caggtggcgttgtgtggaggatatgtcgcagtgaacgctgagctggaggttttggtgcta
aaactggaggcagcatctgaccctgcagctgcagaagaacccctggaaaccagtaaaagt
gcagcagaacctccacaagatcaggatgacttcctgctcattccaagacaccaggagctg
ctcgaaagcaaagcgaaagactgcgacatccttgttaccatggaaaaaactgggctggag
gaccaagcgcagtatcagttctcctacattcttttccggcgcttttctcccgagttcttc
caaggctgcagagtcgaggagatgcagatccactcgctgcagctttatccactgttcaca
agtaattccctagaggacccaacatgtgtgttctgcttcttctctcttcccactgccggc
tacctgtacagcctaaagggtggagtggagctgctgtcagcctaccagtatccagaaaag
gtccttcaggcggtgatgtctgatcacctgttgcatgtcattactaaaaatgccctgcag
tgttttacggtgcgatgctcagctgtggccgccagaatggaagacccttacattgacacc
accatgaaggcttgtccacccagcaccttggaggtgtgtgcactcagaatccagttattc
atcggtctgcggtcggtttgcgtctataatcaacgtgtcatcctgctctctgctgcggac
actgaaacacaacaggagcctgagcgcaggtgcctcaagttgaaagagaacagcgtgctg
acaggtattttcttggcggtgggaattgatcccgcaaccacgccagctttggagaacctt
ctgtcacgtccttttttaagcaggaagtggacaatctcctcgccgaaggaaaccagcaca
gttggacatgggtggaacctttacgtggtcgacaccgtccatcccttcacactctaccag
gagatggttgaatacagctgtcgctacgtgcagaccaccccacaatcccacagtcttcgt
cacctcctcagtgaagctcacctcttgctgcgagcctgtttgctgcaaacaccagagcag
aagcagagtggccagggcgaccctgcagtgtcctcgaaaccaggctccaatggcgcggtt
gataaaaattcagccacacaggcaaacagacaagaactagaggaggcgctcaggcagaac
tctgcacagctgggagactgtttcagcagggcgagtcagaaggactgccacttagccctg
ccgtactacaagatgtccggtttgaccgtcgccgaggtcatctccagaaaccgtcctcct
ccagagggcccttcctcttatggcctgggcttcctattttaccttaaacttcacctttta
gaggagacggagcagcatctcactcaggaagaagcagatgaaatcatttacatcttcagc
caatcagagcccttcttgctggtcagcgtgtgtgccagcccctgcatgataaactgcagt
gcaactcggacgctccagatcttgcagcgtctggaagacacggctggcgtgtcggtccca
ctcacgattatcatggcagccatggcgctgcgtctgggcaaacagcaggattacacagag
ctgatggagcggcacgctgagatgcagctggtgtatgggttcatagaagagccgaggctg
ttgctgcacggaggaggaggaggaggaggaggaggaggaggaggccagcactcccaggtc
catcccacttcattggctcggcagctggcaaacacccaacctggactgttggtggctgct
atggtggctttacatgagaactgcaaagttcagctggaacaggccgattttgtattcaaa
gagctgggctgtgagaacactttactggtggatttctgggaggcgatgctcatggcatcg
tcacaggatgcagtcattcaggaacttctgttcagggtggcgtcagtttacattgaccga
ctgacaaactcaatcaatggaagtggagcgccgaagtacaagtcactaaagggggccgac
gatttgatcacctcctgctctcattatggtgctctgtacccgtggctcactgttctaaat
cccactcacagcaccacgtctgaacaccaggaggcgctgcataaactgcagtctctgctg
tgcggtccttccctctctgtgggctccatcgtgcctctattggagcgtctctcaggagaa
accttgtggggcttcagcctgcacctcctctgtgccaccagaagggggcagtatgaaagc
agcattgagcagttgttggacaggtgtcctcaggccatcatagcctacgccaaccaccag
ttacaggacaaatatatgacactatggtggcagaagctgcttcctgagctttgcaagcga
acgagagcagcggcagataacggcattctgctgggggctctcaaagagacactggtggtg
gttgccatggagacgagtcctgctgagtttttggagctaattcccgacgatggtactgcg
tcctactttctccctcacctgttgacgtgcagccaaagacatttgatggcctga
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