KEGG   Oryzias latipes (Japanese medaka): 101174288
Entry
101174288         CDS       T02443                                 
Name
(RefSeq) cadherin-5
  KO
K06533  cadherin 5, type 2, VE-cadherin
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04514  Cell adhesion molecules
ola04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    101174288
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    101174288
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ola04515]
    101174288
   04090 CD molecules [BR:ola04090]
    101174288
Cell adhesion molecules [BR:ola04515]
 Cadherins
  Major cadherins
   101174288
CD molecules [BR:ola04090]
 Proteins
  101174288
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_CELSR2_9th Cadherin_4 Nse5 BatA
Other DBs
NCBI-GeneID: 101174288
NCBI-ProteinID: XP_004076995
UniProt: H2L6Y0
LinkDB
Position
15:5020405..5063619
AA seq 781 aa
MECLQVWTAGLMTTLAFFIVTMHESGLPRVVAHRLDHADGVNKESHVVLTRQKREWQWNF
LYVEEEKPAPVPYKIGQLKSSKKDSTMNFEIEGEGANSIFTVDRGGDLFVTTSLDREKKA
SYNLTARMYDKDNNLVEDAGHFVIHVTDINDNSPVFSQTFNGYIMERSKIGTFVTKVTAT
DADDPSTANGVLKYSLAKGGDVSAFSISETTGEISCKVNTLDRESRSQYTVVVKAQDLRG
LASGITATTSVTITITDANDNTPSFRKPKYEMKAPENHKLNEVIDTLLVDDRDELKNKKP
VFRILKEEYNKVFGIQLDSNKNGNLVLKQALDYEKTQRYTFTVQVKEDLEFPADNLNTAI
TSAQVTVEVTDVDEPPVFSETVYTFKVLEEHIVDQIGIIKASDPDRANKSIRYSIEEEGC
PISVHPIKGQLSTVRRLDRELQATHVFHVKAREEPDGLESVVRVHIDVQDYNDHEPELDD
VDAFVCENDTTNTVIGTLKANDEDDQPATFTFSLASPSSNFSIKDFGNSSAVILVKQGPF
SVDDPKEYSVDVRISDGGQPVKTSVTKLAIKSCRCDAGRITKYCKPGARRMGVSFHALIA
ILLCIITILVIVILFAVRKRYQKDSLASMKNSGEIHEQLVTYDEEGGGEMDTNGYDVSIL
SSACQDGSLLRHSDHHAHPSLYAMVQKSQHRPQAPACKGDMAAMIEVKKDEADHDRDGFP
YDTLHIYGYEGPESLAGSLSSLESSSSGSNLDYDFLNDWGPRFKALAELYGVDSSDYYHQ
Y
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggagtgtcttcaggtttggactgcaggactcatgaccactttggccttttttattgta
actatgcatgaatctggacttccaagggtggtggctcacagactagatcatgctgatggg
gtgaacaaagaatcacatgtggtactgaccagacagaagagagaatggcaatggaacttt
ctgtatgtggaagaggagaaaccagctcccgtcccctacaagattggacagctcaagtca
agtaagaaggattcaacaatgaattttgaaatagaaggcgaaggagcaaacagcatcttc
accgtggatcggggtggagacctgtttgtcaccacatctctggacagagagaagaaggct
tcatacaatctgactgctagaatgtatgataaggacaacaacctggtagaggatgctgga
cactttgtgattcacgtgactgacatcaatgacaacagccctgttttttcacaaacattc
aacggatacatcatggagaggtctaaaattggaacttttgttaccaaggtgacagcgact
gatgcagacgacccctccactgccaacggagtcctcaagtactccttggccaaaggggga
gatgtttctgccttcagcataagtgaaaccacaggtgagatcagctgcaaggtaaacact
ctggaccgagagagcaggagccagtacactgtagtggttaaagctcaggacttgagaggt
ctggcctccggcataacggccaccacttcagtcaccattaccatcaccgacgccaacgac
aacacgccgtctttcagaaaaccaaaatatgaaatgaaggctccggagaaccacaagctg
aatgaggtgatcgacactctgctggtggacgacagagatgagctaaagaacaagaagcct
gtgttcaggattctgaaagaagaatacaataaagtttttggcatccagcttgattcaaac
aagaatggcaaccttgtgctcaaacaggctttagactacgagaaaacacagagatacact
ttcaccgtccaggtgaaagaagatctagagttccctgcagacaatctgaacactgcaatc
accagtgcacaggtaactgtggaggtgacagatgtggacgagccgcctgttttctcagag
accgtctacacctttaaggtgctggaagaacacattgtggaccaaattgggataatcaaa
gccagtgatcctgacagagccaacaagagtatacggtacagcattgaagaagagggctgt
ccgatcagcgtacacccaatcaagggtcaactgtccacagtgaggaggctggacagagag
ctgcaggcgacacacgtgtttcatgttaaagcgcgggaggagccagatggtttggagtca
gttgtaagagttcacatcgatgtgcaggactacaatgatcacgagcctgaactggacgat
gtcgacgcctttgtctgcgagaacgacaccaccaatacggtcattggaactttgaaagct
aatgacgaagacgaccaaccagctacttttaccttcagcttagccagtccaagttcaaac
ttctccatcaaagacttcggcaacagctcagcggtcatcctggtgaagcagggacccttc
agtgtggatgaccccaaagaatacagcgtggatgtgcgaatcagtgatggagggcagccc
gtcaagaccagcgtcaccaagctggccatcaagtcctgccgctgtgatgctgggaggatt
actaagtactgtaaaccaggagctcgcaggatgggagtcagttttcatgccctcatagcc
attctgctctgcatcatcaccatcctggtcatagtgatcctgtttgcggtgaggaaacgc
taccagaaggattctctggccagcatgaagaacagcggggagatacacgagcagctggtc
acgtacgacgaggaaggaggaggagagatggacaccaacggctacgacgtctcgatcctt
tcgtctgcctgtcaggatggctcactactgcgccactcggaccaccacgcccacccctct
ctgtacgcaatggtccagaaatcccagcatcgcccacaagcccctgcttgtaagggcgac
atggcagccatgatcgaggtgaagaaagacgaagcagatcacgacagagacggatttccg
tacgatactctccacatctacggctacgagggacccgagtctttagctggaagtcttagc
tctctggaaagctcttcgtccggctcaaacttggattatgacttcctcaacgactggggt
ccaaggttcaaggccttggctgagttgtacggagtagacagctccgactactaccatcag
tactga

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