Oryzias latipes (Japanese medaka): 101174288
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Entry
101174288 CDS
T02443
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecules
ola04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101174288
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101174288
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101174288
04090 CD molecules [BR:
ola04090
]
101174288
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Major cadherins
101174288
CD molecules [BR:
ola04090
]
Proteins
101174288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Nse5
BatA
Motif
Other DBs
NCBI-GeneID:
101174288
NCBI-ProteinID:
XP_004076995
UniProt:
H2L6Y0
LinkDB
All DBs
Position
15:5020405..5063619
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AA seq
781 aa
AA seq
DB search
MECLQVWTAGLMTTLAFFIVTMHESGLPRVVAHRLDHADGVNKESHVVLTRQKREWQWNF
LYVEEEKPAPVPYKIGQLKSSKKDSTMNFEIEGEGANSIFTVDRGGDLFVTTSLDREKKA
SYNLTARMYDKDNNLVEDAGHFVIHVTDINDNSPVFSQTFNGYIMERSKIGTFVTKVTAT
DADDPSTANGVLKYSLAKGGDVSAFSISETTGEISCKVNTLDRESRSQYTVVVKAQDLRG
LASGITATTSVTITITDANDNTPSFRKPKYEMKAPENHKLNEVIDTLLVDDRDELKNKKP
VFRILKEEYNKVFGIQLDSNKNGNLVLKQALDYEKTQRYTFTVQVKEDLEFPADNLNTAI
TSAQVTVEVTDVDEPPVFSETVYTFKVLEEHIVDQIGIIKASDPDRANKSIRYSIEEEGC
PISVHPIKGQLSTVRRLDRELQATHVFHVKAREEPDGLESVVRVHIDVQDYNDHEPELDD
VDAFVCENDTTNTVIGTLKANDEDDQPATFTFSLASPSSNFSIKDFGNSSAVILVKQGPF
SVDDPKEYSVDVRISDGGQPVKTSVTKLAIKSCRCDAGRITKYCKPGARRMGVSFHALIA
ILLCIITILVIVILFAVRKRYQKDSLASMKNSGEIHEQLVTYDEEGGGEMDTNGYDVSIL
SSACQDGSLLRHSDHHAHPSLYAMVQKSQHRPQAPACKGDMAAMIEVKKDEADHDRDGFP
YDTLHIYGYEGPESLAGSLSSLESSSSGSNLDYDFLNDWGPRFKALAELYGVDSSDYYHQ
Y
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcttcaggtttggactgcaggactcatgaccactttggccttttttattgta
actatgcatgaatctggacttccaagggtggtggctcacagactagatcatgctgatggg
gtgaacaaagaatcacatgtggtactgaccagacagaagagagaatggcaatggaacttt
ctgtatgtggaagaggagaaaccagctcccgtcccctacaagattggacagctcaagtca
agtaagaaggattcaacaatgaattttgaaatagaaggcgaaggagcaaacagcatcttc
accgtggatcggggtggagacctgtttgtcaccacatctctggacagagagaagaaggct
tcatacaatctgactgctagaatgtatgataaggacaacaacctggtagaggatgctgga
cactttgtgattcacgtgactgacatcaatgacaacagccctgttttttcacaaacattc
aacggatacatcatggagaggtctaaaattggaacttttgttaccaaggtgacagcgact
gatgcagacgacccctccactgccaacggagtcctcaagtactccttggccaaaggggga
gatgtttctgccttcagcataagtgaaaccacaggtgagatcagctgcaaggtaaacact
ctggaccgagagagcaggagccagtacactgtagtggttaaagctcaggacttgagaggt
ctggcctccggcataacggccaccacttcagtcaccattaccatcaccgacgccaacgac
aacacgccgtctttcagaaaaccaaaatatgaaatgaaggctccggagaaccacaagctg
aatgaggtgatcgacactctgctggtggacgacagagatgagctaaagaacaagaagcct
gtgttcaggattctgaaagaagaatacaataaagtttttggcatccagcttgattcaaac
aagaatggcaaccttgtgctcaaacaggctttagactacgagaaaacacagagatacact
ttcaccgtccaggtgaaagaagatctagagttccctgcagacaatctgaacactgcaatc
accagtgcacaggtaactgtggaggtgacagatgtggacgagccgcctgttttctcagag
accgtctacacctttaaggtgctggaagaacacattgtggaccaaattgggataatcaaa
gccagtgatcctgacagagccaacaagagtatacggtacagcattgaagaagagggctgt
ccgatcagcgtacacccaatcaagggtcaactgtccacagtgaggaggctggacagagag
ctgcaggcgacacacgtgtttcatgttaaagcgcgggaggagccagatggtttggagtca
gttgtaagagttcacatcgatgtgcaggactacaatgatcacgagcctgaactggacgat
gtcgacgcctttgtctgcgagaacgacaccaccaatacggtcattggaactttgaaagct
aatgacgaagacgaccaaccagctacttttaccttcagcttagccagtccaagttcaaac
ttctccatcaaagacttcggcaacagctcagcggtcatcctggtgaagcagggacccttc
agtgtggatgaccccaaagaatacagcgtggatgtgcgaatcagtgatggagggcagccc
gtcaagaccagcgtcaccaagctggccatcaagtcctgccgctgtgatgctgggaggatt
actaagtactgtaaaccaggagctcgcaggatgggagtcagttttcatgccctcatagcc
attctgctctgcatcatcaccatcctggtcatagtgatcctgtttgcggtgaggaaacgc
taccagaaggattctctggccagcatgaagaacagcggggagatacacgagcagctggtc
acgtacgacgaggaaggaggaggagagatggacaccaacggctacgacgtctcgatcctt
tcgtctgcctgtcaggatggctcactactgcgccactcggaccaccacgcccacccctct
ctgtacgcaatggtccagaaatcccagcatcgcccacaagcccctgcttgtaagggcgac
atggcagccatgatcgaggtgaagaaagacgaagcagatcacgacagagacggatttccg
tacgatactctccacatctacggctacgagggacccgagtctttagctggaagtcttagc
tctctggaaagctcttcgtccggctcaaacttggattatgacttcctcaacgactggggt
ccaaggttcaaggccttggctgagttgtacggagtagacagctccgactactaccatcag
tactga
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