Oryzias latipes (Japanese medaka): 101174510
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Entry
101174510 CDS
T02443
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101174510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101174510
Membrane trafficking [BR:
ola04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
101174510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
101174510
NCBI-ProteinID:
XP_011477645
UniProt:
A0A3B3IFS9
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Position
9:complement(17226051..17238943)
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AA seq
1242 aa
AA seq
DB search
MSLLGQSQQLFPTSVQVTVHQARNLRVKGKNGGNDAYAIMQVAKDKFSTSVAEKSVAPVW
KEEASFDLPLFHPGNAERCTLYIIVMHRAQVGLDKFLGQAVINLLELHDDKSRKKTQWYK
LVDKNGKEDKVRGEVMLDIQFMRNNLSVSMLDLSMQDKPRSRISKLKDKVRGKKKDGFSD
SASAIVPSVSKTDLTDSEEDADAKSLNQAPGAKKKSKLKTLFVPKSNLQRNISQSMSTLG
TLPEKNSSLSGSRSSGLNVDSPEGKKKFKFLGHKRSGSSDSKTSLGPFSVLGRSKQNIND
QNNLCINGNHVYTEESKTKSGSTLSLNSSGKGSLEDIRKNTSDIPAESSKTINVPAFKSE
PINKVSLEQQRHQEAEERRQAEEKRLAEVRRLEQEEKYRAEAKKLQEEEQRKQQEEQERR
RRVIEDEARRKKQNEEERRREEERKVLEAAENQRLEDERGRAEERKRQEEASMSDRLTSL
FGMIRKKEEKKEDVQQQAPVEQHPTPATRTNSGAPTQSVSHHSTNPFEDTSGPSTVDSES
SAANQKFNRNPQAPSATVFLSRTAKVSAVKPRLSQSSESETPDCQSPVQLDSFSVRSEST
FTRVPAESSEAFSNLHLLLAPPNRSPSRPGSPRGSTEDLSSVELGRSSSSAMADQRRKAI
LPPSYSGHRTPTEESLAPVKNPVYVEEDGPPRGNKLSLPLPDYESLFPQRRHGVQGQTRW
DHIVAEVNQKQRDRGPELVGPEMSVDGPEEYASSLKSHMPQETPAEKKPTTKPVSSKKAA
APAPPKQASSGVDFSQKHRQNVTPQSVTRHSPSVVPPFRKTGSPSNRMFREGDGNVAKAS
TEGAPSHRPQSQKTFDPTPAADQRSVQVALDKQPPTAKPRQRVGAKEPAQQEPSAVSSSI
QTLSSVSKTDNKTTKNIAELDQLPYTEHKSKDGPGHLKQNQEDDGLFTGRQEKRQQKSEE
LLMRKDYLKDFSIENPADHVALNDCDSEKTSESRKEEEQMPQSPSFQRKNSQRAKKNLPL
RSLTDDKTFMSQQESASNEMPDLPSGDVVDGSVKPKSQYDARTQSSFNAAKDQNQTEVFQ
GHSAFSYSEPLPVVPEEPEAQTGNIWGGKTPLRAWVSPSEAQPVSTQYSNGSGLALTPRR
PHPVKPMSSPEIQQPTIPPAVKEIKVVSSAPAIMKMADSVSSGPYGQLTQEELISLVVKQ
QADLSKKDAKISELEQYIDNLLVRVMEEKPTILFSLNSAKQA
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcttggccagagccagcagttgtttcccacgagtgtccaggtaacggtgcac
caggctcggaacctccgtgtgaagggaaagaatggcggcaacgacgcctatgccatcatg
caggtggccaaagataagttttccacctcggtggcggaaaaaagcgtcgccccggtgtgg
aaggaggaggcctcgtttgacctgccacttttccacccgggaaacgccgagcgctgtact
ctgtacatcatcgtcatgcatcgagcccaggtgggactcgacaagtttctgggccaggcc
gtgatcaacctgctggaactccatgacgacaagtcgcgcaaaaagacacagtggtacaag
ctagtggacaaaaatggaaaggaggacaaggtgcgaggcgaggtgatgcttgatatccag
tttatgagaaacaacctgtcagtgagcatgcttgacctttcgatgcaagacaaaccccga
tctcgcatctccaagctgaaggacaaagtccgtgggaagaaaaaagatggcttctctgac
tctgcttcagctattgttccctctgtcagtaagacagaccttacagacagtgaggaggac
gccgacgcaaagtctcttaatcaggctcctggagcaaagaagaagtccaagctcaaaacc
ctgtttgtccccaagtcaaacctgcaacgcaacatctcacagtccatgtctactctcgga
acgctcccagaaaagaattcctctctcagcggcagccgctcttctggcctcaatgtagat
tctcctgaaggtaaaaagaaattcaaatttctgggacacaagcgatcaggaagctctgac
agtaaaacgtctcttggtcctttttctgttctgggccgctccaagcagaacataaacgac
caaaacaacttgtgcataaatggcaaccacgtgtacactgaggaatcaaagaccaagagt
gggtctacgctgagtctgaacagctctggcaaaggctccctggaggacatccgcaaaaac
acatctgacattcctgcagaatcctccaaaactataaacgtccctgcattcaaatctgaa
ccaatcaataaagtttcattagagcaacagcgccaccaagaggcagaagaaagaaggcag
gcagaagagaagcgtcttgctgaggtgagaagactggagcaagaggagaaatacagggca
gaggccaagaaactccaggaggaagagcagcgcaagcagcaggaagagcaggagaggaga
cgccgtgtcattgaagatgaagcaaggaggaagaaacaaaatgaggaggagaggagaaga
gaagaagagcgaaaagtgctggaagctgctgaaaatcaaaggcttgaagacgagcgtgga
agagcagaggagcgcaaacgccaagaggaggcctccatgagcgataggctgacgtctttg
ttcgggatgatccgaaagaaagaggagaaaaaggaagatgtacaacagcaagctcctgtg
gagcagcaccccaccccggcaactcgcaccaactcaggagcacccactcagtccgtgtcc
catcactccactaacccatttgaagacacctctggtccttcaactgtcgacagtgaaagt
tcagccgctaaccaaaagttcaaccgcaacccacaagccccctctgctacagtttttctc
agccggactgctaaagtgtcagccgtcaaacccagactctctcaaagttcggagtctgaa
acccctgactgtcaatctccggttcagctagactccttctcagtcaggtctgagtccact
ttcactagagtcccagcagagtcctctgaggctttctccaatctacacctactgttggct
ccaccaaacaggagcccaagccggcctggttctccccgtggcagtacagaggatttgtca
tctgttgaattggggagatcatcatcatctgctatggcagaccaaaggagaaaagccatc
ctaccaccctcatattctggacataggaccccaactgaggaaagtttggctcctgtcaaa
aatccagtgtatgtagaagaagatggacctccacgaggaaataagttgtctttaccactt
cctgattatgaaagcctctttcctcagagaagacatggagtacaagggcaaactcgttgg
gatcatatagttgctgaggtcaaccagaaacaaagggacaggggacctgaacttgtgggt
cctgaaatgagtgttgatgggccagaagaatatgcatcaagtcttaaatcccacatgcca
caggagactcctgctgagaagaagcctacgacgaaaccggtgtcgtcaaaaaaagcggcc
gctcctgctccaccaaaacaagcatcttctggtgtagacttcagccagaaacacagacag
aatgtcaccccccagtctgtaacgagacatagtccatctgtagtcccaccatttagaaaa
acgggctcccccagcaacagaatgttcagagagggagatggcaatgtggcaaaagcatca
accgaaggcgcaccttcacaccgaccacagagtcagaagacttttgatccaacaccagca
gctgaccaaaggtctgtgcaagttgctttggacaaacaaccacccacagctaaacccaga
caaagggttggtgccaaagagcctgcacagcaggagccatctgctgtgagcagtagcatc
caaacattgtctagtgtgagcaaaacggacaacaaaacaacgaaaaacattgcagagttg
gatcagcttccttatacggagcataagtccaaagatggaccgggacacctaaagcagaac
caagaagatgatggcctgttcactggcaggcaggaaaaacggcagcagaaatccgaggaa
ctactgatgagaaaagattatttaaaagattttagcattgaaaatcctgctgatcatgtt
gccctaaatgattgtgattcagaaaagacgagtgagagcaggaaagaggaggaacaaatg
ccacaaagtccctcttttcaacgaaaaaactcacaaagagcaaagaagaatcttccactg
agaagtctcacagacgacaaaactttcatgtctcagcaagaatcagcatctaatgagatg
ccagacttgccctcaggagatgttgtcgatggttccgtaaaacccaagtctcagtatgat
gccagaacacaaagcagttttaatgcggcaaaggatcaaaatcaaaccgaagtttttcaa
ggacattcagctttttcctattctgagcccctcccagttgtcccagaggagccagaagct
caaactggaaatatatgggggggaaagacacctttgagagcgtgggtgtccccctctgaa
gcccagcctgtcagtactcagtatagcaatggaagtgggctagcattaactcctcgcaga
ccacatcctgtgaagcctatgagctcaccggagatccagcaacccaccattcctcctgct
gtgaaggaaataaaggtggtgagcagtgcacctgcaataatgaagatggctgattctgtg
tcaagtggtccttatggtcagctgacacaagaggagctgatttcgctggtggtgaagcag
caggctgacctctccaagaaggatgctaagatcagtgagctggagcagtatatagacaat
ctgcttgtccgtgtgatggaggagaaacccactatcctgttttccctcaactctgccaag
caagcttga
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