Oryzias latipes (Japanese medaka): 101174523
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Entry
101174523 CDS
T02443
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ola03009
]
101174523 (ddx52)
Enzymes [BR:
ola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101174523 (ddx52)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
90S particles
Helicases
101174523 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
FBF1
Zona_CL2
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
101174523
NCBI-ProteinID:
XP_004076440
UniProt:
A0A3B3H569
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Position
14:complement(12582774..12588510)
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AA seq
657 aa
AA seq
DB search
MDAYDLFRKLGAGAKFDLKRFGQDAARFKVTRSREGETLSHALSTIDYFRTDPTSGPQIS
FQTGQEDEDGESGESEAGGKRQRIEDDYTKSKKKKTKNKQVSAKDVGKTWNESEGNGIKL
TSSSGRKIQSLQCDEEKSSLKKLKRLHQEKINRVRSQHRINVHGSDVPDPVCTFEELQSE
YRLNPRVLQNLKDAGLNSPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFCLPLLTHLQH
PANLGFRAVIISPTRELASQTYRELLRLSEGVGFRVHIIDKASLAAKKYGPHSNKKYDIL
VSTPNRLVFLLKQDPPAIDLSCVEWLIVDESDKLFEDGKRGFREQLATIFLSCCGAKVRR
AFFSATCTTEVEQWCRLNLDNLVSVNIGHRNTAVDTVEQELLFVGSESGKLVAMRDIVKK
GFLPPMLVFVQSIERARELFHELVYEGINVDVIHAERTQQQRDNVVNSFRSGKIWVLICT
ALLARGIDFKGVNLVVNYDFPTSAVEYIHRIGRTGRAGHQGKAVTFFTESDKPMLRSIAN
VIKQAGCPVPDYMIGFKKLHSKVKRRLEKKPPKRNTICTTPRFMIKKKGNAKKQKTVSGG
RHKDTKEPETPTQKNGEKMTRKQRLKGRTAEDGEKVTQKPKKAIRKKTNSPGALFGK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttatgacttatttcggaaacttggagcaggcgctaaattcgaccttaaaaga
tttggtcaagacgctgccagatttaaggttaccaggtctcgggaaggggaaacattatcg
cacgctctatctacaatcgattatttccggacagacccgaccagcggcccacagatcagc
ttccagacagggcaggaggatgaggacggagaaagcggagaatccgaagctggaggcaaa
agacagcgcattgaggatgattatacaaagtccaaaaagaagaaaacaaaaaacaagcaa
gtgtcagctaaagatgttggaaaaacgtggaacgagtctgagggaaacggcatcaagttg
acgtcgtcttctggcagaaagattcaaagcctgcagtgtgatgaagagaaatcctcgctg
aagaagctgaaacgacttcatcaggaaaagatcaaccgcgttcgctctcagcaccgaata
aatgttcacggttctgacgtccccgatcctgtgtgtacttttgaggagctacagtctgag
tatcgtctgaacccccgtgttctccagaacctcaaagatgcagggctcaactctccaact
cccatacagatgcaggcaattccactcatgatgcacggtcgggagcttttggcttgtgct
cccacaggatctggaaagactctggccttttgtctcccgctgctcacccacctgcagcat
ccagccaacctgggtttcagagccgtgatcatttctccaaccagagaactggccagtcag
acttacagagagttgctccgcctatcagagggagtcgggtttcgagttcacattatcgac
aaagcttccttggctgctaagaagtatggaccccattcgaacaagaaatatgatattctc
gtcagcacccccaacaggctggttttccttcttaaacaggatcctcctgctattgacctc
agctgtgtggagtggctcattgtggacgagtctgataagctttttgaagacgggaagagg
ggcttcagggagcagcttgccaccatttttctcagctgttgtggtgcaaaggtgcgcagg
gctttcttcagcgccacatgcactacagaagtcgaacagtggtgccgcctgaacctcgac
aacctggtctctgtaaacattggacataggaacactgcggtggacacggtggaacaggag
ctgctgtttgttggctcagagagcggcaagcttgtagccatgagagacatcgtcaaaaaa
ggattcctaccccccatgctggtgtttgtgcagtcaatagaaagagcgcgggaactgttt
cacgagttggtttatgagggcatcaacgtagacgtgatccatgcggagcgcacacagcag
cagagagacaatgtggtgaacagttttcgatccgggaagatttgggtgttgatctgcaca
gctctgcttgccagaggaatcgatttcaaaggagtgaacctcgtagtgaactacgacttc
cccaccagcgctgtggaatatattcacagaatcggtcgcacaggcagagctgggcatcag
ggaaaagctgtcacctttttcacagagagtgacaaaccgatgttgcgcagcattgcaaat
gtcatcaaacaagctggctgtcctgtaccagactacatgatcggcttcaagaagttgcac
agcaaagtaaagcggagacttgagaagaaacctcctaagagaaacaccatttgcacaact
ccacgcttcatgataaagaaaaaaggcaacgcaaagaaacagaagacagtttccggtgga
aggcacaaagacacaaaagaacctgaaacaccaacacagaaaaatggggaaaagatgaca
aggaaacagagactgaagggaagaactgcagaagacggagaaaaagttactcaaaagccc
aagaaagcaattcgaaagaagacaaattctccaggggctctgtttggaaagtag
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