Oryzias latipes (Japanese medaka): 101174559
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Entry
101174559 CDS
T02443
Name
(RefSeq) glycine receptor subunit alpha-3 isoform X1
KO
K05195
glycine receptor alpha-3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04080
Neuroactive ligand-receptor interaction
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101174559
04082 Neuroactive ligand signaling
101174559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101174559
Ion channels [BR:
ola04040
]
Ligand-gated channels
Glycine
101174559
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
101174559
NCBI-ProteinID:
XP_011491613
LinkDB
All DBs
Position
1:830758..869863
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AA seq
501 aa
AA seq
DB search
MMKRRELCGACPSVVWKLLLLLSVSRCKEMDAAVRARHAPMSPSDFLDKLMGRTSGYDAR
IRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPRLAYAEYPDDSLDLDP
SMLDSIWKPDLFFANEKGAHFHEVTTDNKLLRIFKNGNVLYSIRLTLTLSCPMDLKNFPM
DVQTCIMQLESFGYTMNDLIFQWQENGPVQVAEGLTLPQFILKDESDLRYCTKHYNTGKF
TCIEVRFHLERQMGYYLIQMYIPSLLIVILSWVSFWINMDAAPARVALGITTVLTMTTQS
SGSRTSLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRHKSKTKSC
HGAVDPEELAESLRRVNTDGGLRAAEPLFGSMNSFSSSHLREEVGESKLTSTAVMTSTPS
ISKDSKASVNNAVAPAANTTQNAPAAGGGGRSTEEMRKLFIDRAKKIDTVSRAGFPLAFL
FFNIFYWVLYKILRHEDFHKQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaggagggagctgtgcggcgcgtgcccgtcagtcgtctggaagctgcttctg
ctgctcagtgtgagtcggtgtaaggagatggacgccgctgtgagggcgcggcacgccccc
atgtctccttctgacttcttggacaaactgatgggaagaacgtcgggatacgacgctcgg
ataagacccaactttaaaggacctccggtcaacgtctcctgtaacatcttcatcaacagc
ttcggctccatagcagagaccaccatggattaccgcgtcaacatcttcctccgtcagcag
tggaacgacccccggctggcctatgccgagtatccggacgactccctggacctggacccg
tccatgctggactccatctggaaaccggacctgttcttcgccaacgagaagggagcccac
ttccacgaagtcaccacggacaacaagctcctgaggatcttcaagaacggcaacgttctg
tactccatccgactaacgttgactctgtcgtgtcccatggacctgaagaacttccccatg
gacgtccagacctgcatcatgcagctagagagcttcggatacaccatgaacgacctgatc
ttccagtggcaggagaacggcccggtgcaggtggccgagggcctgaccctcccccagttc
atcctcaaggacgagtcggacctgcggtactgcaccaagcactacaacacaggtaaattc
acctgcattgaggtgcgcttccacctggagcggcagatgggctactacctgatccagatg
tacatcccctccctcctcatcgtcatcctgtcctgggtctctttctggatcaacatggac
gccgcccccgctagagtggcgctgggcatcaccaccgtgctcaccatgacgacgcaaagc
tcgggctccaggacgtcgctgcccaaggtgtcctatgtgaaggccatcgacatctggatg
gcggtgtgcctcctcttcgtcttctccgcgctgctggagtatgccgccgtcaactttgtg
tcgaggcaacacaaagagctgctgcgcttcaggcgccacaagagcaagacaaagagctgc
cacggtgccgttgatccagaggagctcgccgagtccctacgccgggtgaacacggacggc
ggcctgagagcagcagaaccgctgtttggatctatgaacagcttctccagcagccacctg
agggaagaagtcggtgagagcaagctgacctccacggcggtcatgacgtccactcccagc
atcagcaaagactccaaggccagcgtcaacaacgccgtcgcccctgcagccaacactacc
cagaatgcacctgcagcagggggcgggggcaggagcaccgaggagatgaggaagctgttc
atcgacagagcgaagaagatcgacacggtgtcgcgggccggcttccctctggccttcctg
ttctttaacatcttctactgggttctttacaagatcctgcggcacgaagacttccacaag
cagtag
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