Oryzias latipes (Japanese medaka): 101174664
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Entry
101174664 CDS
T02443
Symbol
ppfibp1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101174664 (ppfibp1)
Membrane trafficking [BR:
ola04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101174664 (ppfibp1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
Motif
Other DBs
NCBI-GeneID:
101174664
NCBI-ProteinID:
XP_011474578
UniProt:
A0A3B3HQT4
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All DBs
Position
6:21432711..21459028
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AA seq
964 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKALDYSNGLFDCQSPTSPFMGGLRALHLLEDLRSILD
LMDTEERESLRCQIPDSTADSVVEWLNGHLSNGHVSVGGGDHYQERLSRLENDKESLVLQ
VSVLTDQVEAQGEKIRDLDLCLEEHREKLNATEEMLQQELLCRTALETQKLELMSEVSNL
KLKLNSIEKEKQDFDHGFRDSEDLILEINELRYRMNDLENEKLQSEKKLKSTKEELIVLR
RELEGKDGEMKKLHGETGFKLISSSGADTTDRISHPDETLRKRLKEKHVEVQRMKKAVES
LMVANEEKDRKIDELKQSLLRYKKVQDMVMSVQGKKGEKAKDGEYMESPSDESSTCSPAN
SVCVESEKQAVSEGEPLKTNSPDEMKTLSVPIETPSPSPTHSDPERVSESTPTEPESQDP
SRADGPDHLEISSNEKATNEEMSITREKNPIGSTAPSQSSTEDDSFGSRKARSSFGKGFF
KIRGGKKTTGSPNLDRSRSASAPMLAETERQGTDHLDLAGLPQTSSSNDGTQTLPATHEN
RKKSKGIKKLFGKLKRSQSTTFNLDDNLPEGEFKRGGVRATAGPRLGWSRDLQRGNNDVD
APFARWSKDQVCNWLQEQGLGLYVNMARVWISSGQTLLQASQLDLEKELGIKHPLHRKKL
QLALQALGSEEEDNKGKLDYNWVTRWLDDIGLPQYKTQFDEARVDGRMLHYMTVDDLLSL
KVGSVLHHLSIKRAIQVLRLNKFEPNCLRRRPSDENNISPAEVSQWTNHRVMEWLRSVDL
AEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFSLLIGAEAQQL
KQECLENPDYTVLTATTKVKPKKLPFSNFGSLRKKKQDESEEYVCPMDVEMPKGQSFQRG
FELQIYEDDLDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKEVSNSPNLSVTDE
DSNA
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgcgagcgacatgttggctgctgccctggagcagatggatggcattata
gcaggttccaaagccttagattactccaatggtttgtttgactgccagtcgcccacctct
cccttcatggggggtttgagagcacttcatcttttggaagaccttaggagtatcctggac
ttgatggacacagaggaaagggaaagtctccgctgtcaaatcccagactccacagccgac
agtgtggttgagtggctcaacggtcacctgtccaacggtcacgtctctgttggcggaggc
gatcattaccaagaaaggctttctcggctggaaaacgataaggagtctctggtacttcag
gtcagtgtgctgaccgaccaggtggaagctcaaggagagaagatccgtgatctggatttg
tgtttggaggagcacagggagaaactcaatgctacagaggagatgctccaacaagaactt
ctgtgcagaactgccctggaaacacagaagctggaactgatgtcagaagtgtccaacctc
aagctgaagctgaacagtatagagaaggagaaacaggactttgatcacggttttagggac
agcgaagatctgattcttgaaataaatgaactgcggtacaggatgaatgacctggagaat
gaaaaactacagtctgaaaagaagctcaaatcaacaaaagaagagcttatcgtgttgagg
agagagctggagggcaaagacggagagatgaagaaactacacggtgaaacgggtttcaaa
ctaatttcctcaagcggggctgacaccacagacagaatttctcacccagatgaaactctt
agaaagaggctgaaggaaaaacatgtggaagtgcagagaatgaaaaaagcagtcgagtcc
ttgatggtagcaaacgaagaaaaggatcgtaagattgatgagctgaagcaatcgcttctg
cggtacaagaaggttcaagacatggtgatgtcagtacaaggcaagaaaggagaaaaagca
aaagatggagagtacatggagagccctagtgatgaatccagcacatgttcacccgccaac
tctgtgtgcgtggagtcagaaaagcaggcggtttcagagggcgagccgctgaagacgaat
agtcctgacgagatgaagactctaagtgtgccgattgaaactccgtccccgagtcccacg
cattctgacccagaacgagtatcagaatccacaccaacagaaccagaaagtcaagacccc
agcagagcagacgggcctgaccatttggaaattagcagtaatgagaaggctacaaacgaa
gagatgagtataacgagggaaaaaaaccccatcggttctactgcgccctcgcagtcctca
actgaggatgacagcttcggctccagaaaagctcgctcatctttcggaaaaggcttcttc
aagatccgaggaggcaaaaagacaaccggcagccctaacctggaccgcagcaggagtgcg
agtgcccctatgctagctgaaacggagcgacagggcaccgatcatctggatctggctggc
cttcctcagacgtcatcaagcaacgacggcacgcagacgcttcccgcaacccatgaaaat
aggaagaaatccaaaggaatcaagaaactgtttggaaagcttaaaaggagccagtccacc
acatttaacctggatgacaacctgccagagggtgagttcaagcgaggtggagtacgggca
acagccggacccagattgggttggtcccgtgatctccaaagaggcaacaatgatgtggat
gccccctttgctcgctggtctaaggatcaggtgtgcaactggctgcaggagcagggactt
ggcctttacgtgaacatggctcgtgtgtggatctcttctggacagacgctgctgcaggcc
tcgcaacttgacctggagaaggagctgggtatcaaacacccgctgcacagaaagaagctg
cagctggctctgcaggccctcggctcagaagaggaggataataagggcaaattggactac
aactgggtaacaagatggttggatgacattggtctgcctcagtataagacgcagtttgat
gaggcccgagtagatggtcgcatgctgcactacatgacagtagatgacctgctttctctg
aaagtaggaagcgtcctgcatcacctcagcatcaagagagcaattcaagttcttcgtctg
aacaaatttgagcccaactgtctgcgccgcagaccgtcagatgagaacaacatttctcca
gcagaggtttcccagtggaccaaccacagggtgatggagtggctgcgatcggtggacctc
gctgagtacgcccccaacctcagaggcagcggcgtccacggagggctgatggttctggag
cctcggtttaatgtggagaccatggccctgctgctgaacatcccccccaacaagaccctc
ctgcggcgccacctcgcaacacacttcagtttgctcattggtgcagaggctcaacagctt
aaacaggagtgtcttgagaacccagactacaccgtactcactgccaccactaaagtcaag
ccaaagaagctgccatttagtaactttggcagtctgaggaagaagaagcaggatgaaagt
gaggagtacgtttgtccaatggatgtggagatgccaaagggacaaagcttccagagaggc
tttgagctccaaatctacgaagatgacctcgacaggttggaacagatggaggactccgag
gggacggtgagacaaattggggcgttttctgagggaattcaaaacctaacgagcatgctg
aaagacgatgagttctttaaggaggtttcaaactcgccaaacctgagtgtgacggatgaa
gactcgaatgcttga
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