Oryzias latipes (Japanese medaka): 101174758
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Entry
101174758 CDS
T02443
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1 [EC:3.6.4.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101174758 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101174758 (pex1)
Membrane trafficking [BR:
ola04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
101174758 (pex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_22
AAA_16
AAA_14
nSTAND3
NACHT
AAA_18
RNA_helicase
AAA_33
AAA_28
NPHP3_N
ABC_tran
TIP49
DUF815
Sigma54_activ_2
AAA_5
AAA_2
NB-ARC
Viral_helicase1
AAA_29
AAA_7
ATP-synt_ab
RuvB_N
FtsK_SpoIIIE
Inhibitor_I71
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
101174758
NCBI-ProteinID:
XP_011479490
LinkDB
All DBs
Position
11:complement(21750178..21762915)
Genome browser
AA seq
1237 aa
AA seq
DB search
MFSNQGIQPVCVVFNNTKNCFIQLSSKLISHLSLNENQALELSWDGGSTVFLSWCPIRAS
LGADSHRVELSRQLGEKLGLTDGEQCFLRPCHQVSSLNQVFVEPLSSDDWEILELHSSAL
EEQLLNQIRVVFLDAVFPVWVDSHTVIYIKIVSLSPHVRFGHLEQFTELVVSPKIGAGVG
IKSSQSQWYPPQQNPTFSSSSLSSAESSFHVPHSNSPGGIANMKNLLRTLITSRYDAVKE
LPPVPDIPVFFPDAIYRVCNSPPVSLCTISHIAIGVVHIFPWNSSSISSKSAVTYGLLSK
VQSPKEAREKNKRASKKNSVSKEEQLTDKGDEGIKQQEPVVVRMICHGTEMLTSKDKCHS
KGEIYCGKVWIPHPLMSKISIRPHSAVRIKPVKSTIKVAIKLGLQPLNAMPEEDDEEIQS
VFLGWLHTKSHEPLGRLTPRSGTILLHGNDAKLEMALTVLKPELQSDPEDQLFLLSPTVL
HKEDIQVNRQPATVPAVSAEAPEPELPSLLSLGGVGEHARVGFEFLSHSFVGNPLSRELG
KAGWGLQGGALLITGAKGSGKSTLSRGLCRKAREDLDSHVEVVDCKKLQGKKAETVRQIL
QDVFEQAEWRQPSVVLLDDLDYLARAPTTPEQDSGPEALLQAHIAQTLRDIVDEFVVRSS
LVCLIITSTSEHSLHPSLTEVQGSHFIQGFVNIQPPDQIQRAEILQHLILRKPLFSEEVP
STLDLTAVAKETEGYTAQDLYVLLERATHANTTRTGRRDRETCLTLTDFEQALKGFVPPS
LWGVDLRAPSGVGLERVGGLKEVRQQLMDTILLPAKFPILFCNLPIRHRSGILLYGAPGT
GKTLTARAVAKDSGMNFISIKGPELLSKYIGASEQAVRDVFQRAQAASPCILFFDEFDSL
APRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYC
PPPDLEARLEILKALSTGLPLTPDVDLEQLAAATEQFTGADLKALLYNAQLEAVHNKTSP
CAPQERAPGSDSDMSLSSMVFPNNSSGSDDSVGEGDQGAGSDQSMVLVESSELRAEQEED
HNNLWRLYFGSSYESELGNSPISRLCICGPCATQDCPGGTVCEPACTLPPAYMSSIQTGY
EEPCPEELDRLQQKITTIKSSYKRGDQECVRTYLSSSQPSLLVSPAHLNSALAVTKASLS
QADWNKYTKLYEDFNGSAGGKVASSVAFKPGQRATLA
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaaccagggaattcaaccagtatgtgttgtttttaacaacactaaaaactgc
tttattcaactctcttcaaagctgatatcgcacctttctctgaatgagaatcaggctttg
gagctgtcttgggacggcgggtcgacagtgttccttagctggtgtcccatcagagcctcc
ttaggagcagacagccacagagtggagttgtctcggcagcttggagaaaagctcggtttg
actgatggagaacagtgttttctcagaccatgccatcaagtctcttcgctgaatcaggtg
tttgtggagccactgtcatctgatgactgggagattttggagcttcacagttctgcactt
gaagagcaactgctgaatcagatccgagtggttttcctagatgccgtgtttcccgtctgg
gtggacagtcacacagtcatctacataaagatagtttcactctcaccacatgtgcgcttt
ggtcatcttgagcaattcacagagcttgtagtgtctccaaagattggtgctggagttggc
atcaaatccagccagagtcaatggtatcctcctcagcaaaacccgacgttttcctcctct
tctctgtcatcggcagagagttcattccatgtccctcacagtaactccccaggtggcatt
gctaacatgaaaaaccttctccgcactttaataacgagcaggtatgacgcggtcaaggag
ctgccgcctgtacctgacatcccggttttcttccctgatgccatctacagagtgtgcaat
tcacctccagtctctctttgcactattagccacattgcgatcggtgttgttcacatattt
ccatggaactcctcttcaatttccagcaagtccgcagtaacatacggcctcctttccaaa
gttcagtcccctaaagaagccagggagaaaaacaagcgggcctcaaagaagaacagcgtt
tctaaagaagagcaactaactgacaaaggagatgaaggcataaagcaacaggaaccggtg
gttgtcaggatgatatgccacggcactgagatgctgacaagcaaagacaaatgtcacagt
aaaggggagatttactgtgggaaagtatggatcccacatcctctgatgagcaaaatcagc
atccgaccacactcggctgttcgaattaagcctgtcaaatccaccatcaaagtagccatc
aaactaggcctgcagcctctaaatgccatgcctgaagaggatgatgaagagatccagtca
gtgtttctgggttggctacacacaaagagtcacgaacctttgggccgtctgactccccgc
tctggtaccatcctcctgcatggaaacgacgctaagttggagatggctttaactgtgcta
aaaccagagctgcagagtgatcctgaagaccagctttttcttctgtcacccactgttctg
cacaaggaagatatacaggtaaacagacagccagcgactgtgccggctgtcagcgctgaa
gcacccgagcctgagcttccgtctcttcttagtcttggtggggttggtgagcacgctagg
gttgggtttgagttcctttcccacagctttgtgggtaaccccctctccagagagctcgga
aaagcaggatggggtctgcaaggaggagcgttgcttattactggtgcaaagggaagtgga
aagagcactctgtccagaggcctctgcagaaaagccagagaggatctggactcgcatgta
gaggtggtggactgcaaaaagcttcaaggcaaaaaggctgagaccgtgagacagattctt
caggatgtttttgagcaggcagagtggaggcagccttctgtcgtcctgcttgatgacttg
gattatttggcccgagccccaactacacctgagcaagacagcggccccgaggcgctgctg
caagcgcacattgcacaaactttgcgggacattgtggacgaatttgtggttcgctccagc
ctggtgtgcctgattatcaccagcacgagcgaacactccctccacccgtctctgactgaa
gtccagggctctcacttcatccaagggtttgtgaacatccagccaccagaccagatccag
cgagctgagattctgcagcatctcatcttaagaaagcccctcttttcggaagaggtgccc
agcactcttgacttgacggctgttgccaaggagacagagggatacacagcccaagatctc
tatgttttgctggagcgtgccacacatgccaacacaactcgaacaggacgccgtgaccgc
gagacatgtttaaccctgacggactttgagcaggccctgaagggatttgttccaccctcg
ctgtggggagtggaccttcgcgctccgagtggagtcggactagagagggtggggggtctg
aaggaggtgcggcagcagctcatggacaccatactgctacctgctaagtttcccatccta
ttctgcaatcttcccatccgtcatcgctctggaattctactctatggagcccctggaaca
ggaaaaaccctcacggcaagagctgtagccaaggacagtgggatgaacttcatcagcatc
aagggacctgaacttctgagtaaatacattggagccagtgagcaggcagtccgtgacgtc
ttccagagggctcaagctgccagtccgtgtatcctgttctttgacgagtttgactctctg
gccccgaggaggggccacgacagcaccggagtgacagacagagtggtaaaccagcttttg
acccagctggatggagtggagggactgcagggtgtttacgtacttgcagctacaagccgc
ccggatctgattgatccagctctcctgagacctggaagacttgacaagtgcctctactgt
cctcctcccgacctggaggctcgattggagatcctgaaggctctgagcacaggcctccct
ctgactccggatgtggatctagagcagttggcagcagcgaccgagcagttcaccggggca
gacctcaaagctctgctctacaacgcacaactagaggctgtccacaacaaaaccagcccc
tgcgcaccacaggagagagcacctggctctgacagcgacatgagtctgtcctccatggtc
tttccgaacaacagcagcgggtcagacgattctgtaggggagggagaccaaggcgctggc
tcggaccagtccatggttctggttgagtccagtgaacttcgagcagagcaagaagaagac
cacaacaacctttggagactgtacttcggaagttcttatgagtcagagctcggcaattca
ccgatttcaagactgtgcatctgtggaccctgtgcgacacaggactgtcctggaggaaca
gtgtgtgagccggcctgcactctccctcctgcttacatgtcctccatccaaactggatat
gaggagccttgcccggaggaattggaccgtttgcagcaaaaaattaccaccatcaagagc
agctacaagagaggcgatcaggagtgtgttcggacgtatttgtcttccagccagccaagc
ctgctggtgtctccagctcaccttaactctgccttggctgtgaccaaagcgtccctcagt
caggcggactggaacaaatacacaaaactatatgaagattttaatggatcagctggtgga
aaagttgcttcttctgtggcttttaaaccaggacaacgtgcgactctagcataa
DBGET
integrated database retrieval system
