Oryzias latipes (Japanese medaka): 101174782
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Entry
101174782 CDS
T02443
Symbol
cdh18
Name
(RefSeq) cadherin-18
KO
K06805
cadherin 18, type 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101174782 (cdh18)
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Major cadherins
101174782 (cdh18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
RET_CLD1
ASFV_J13L
DUF5000
Motif
Other DBs
NCBI-GeneID:
101174782
NCBI-ProteinID:
XP_004081245
UniProt:
H2MFA8
LinkDB
All DBs
Position
20:24843144..25023599
Genome browser
AA seq
796 aa
AA seq
DB search
MRIPMTCCLCPFLVCLCFIQRCYGASHHVPTKVPSKNQTKLANGETEVHHRPKRGWIWNQ
FFVLEEHMGPDAQYVGKLHSNSDKGDGSVRYILSGEGAGTIFIIDEVTGDIHATKSLDRE
RKAHYVLHAQALDRNTEEALEPKSEFIIKVQDINDNAPKFPDGPFEATVPEMSEVGTSVL
QVTATDSDDPTYGNSAKIVYSILQGQPYFSVDPKTGIIRTALPNMDREAREHYTVVIQAK
DMAGQVGGLSGSTTINITLTDVNDNPPKFPQKNYQVLVLESAEVGTPVGKLKANDDDLGT
NADIKYTIINSEGANMFSIATNRDTKEGIVSLKKPLNYERKKTYTLHIEGLNTHADPRFT
YLGPFKDTATLKISVGDVDEAPVFSMDYYILDVYENSPSGTEVGTVTARDPDGDNKPVRY
ELDSKEEEESYFRIDAKSGVIRTTQPLDREDTPWHNITVVASEVGNPVLFSHVPVTVQVL
DTNDNPPEVAADEEVIVCESSRPGQVIQTVRAVDKDDFANGQRFSFALPSQLPVNPNFTL
KDNEDSTASIIARRRRFSHLTQELYELPIVVWDGGEPSLTGTSTLTLRVCPCQRHGRIRM
CQGEAFLSSAGLSTGALIAILLCIIILLAIVVLFITLRRSKKEPLIISEEDIRENVVTYD
DEGGGEEDTEAFDIVALRNPAAAEELKFRRDIRPEARSQCGFAHGQRSPSVELDEVDVHK
FIKQRLVEADMDASVPPYDSLQTYAYEGQGSPAGTISPLDSLGVQSEQEYNYLDDWGPEF
QKLAELYGEAESDVTT
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaggatacccatgacctgctgtctttgcccatttttggtctgcctctgcttcatccag
agatgctatggggccagccaccatgtccccaccaaagtgccctccaagaaccagaccaaa
ctggccaatggggaaacggaggtgcaccacaggcctaagcgtggctggatctggaaccag
ttctttgttttagaagaacacatgggaccagatgcacagtatgtgggaaagcttcactca
aactcagataaaggagatggatctgtcaggtacattctgagtggagaaggagctgggact
atatttatcatcgacgaggtgacaggagatattcatgccaccaaaagccttgatcgggaa
aggaaagcacattatgtcctgcatgctcaagctttggaccggaacacagaggaagccctg
gaaccaaagtccgaattcatcatcaaagtgcaagacatcaatgacaatgcaccgaaattt
ccagatggaccctttgaagctacagtacctgaaatgtctgaagtgggcacctctgtactg
caagtcacagcgaccgactctgacgaccccacctatggaaacagcgccaaaatcgtctac
agtattctacaaggacagccatatttctctgtcgaccctaaaacaggaatcatcaggacg
gccttaccaaacatggaccgggaagccagagagcactacacagtggtgatccaagccaaa
gacatggcaggccaggttggaggcctctctggttccaccaccatcaacatcaccctgacc
gacgtcaacgacaacccgcccaaatttccccaaaaaaattaccaggtgttggtgctggaa
tcagcggaggttggaacacctgttgggaagctcaaagccaacgatgatgaccttggcacc
aacgcagacatcaagtatactatcatcaactcagagggggccaacatgttctccatagcc
accaacagagacacaaaggagggaattgtcagcctcaaaaagcccctcaactacgagagg
aagaagacctacacgcttcacatcgagggactgaatacacatgcggatcctcgttttacc
tatctcgggcccttcaaggacacggccacccttaaaatctccgtgggggacgtggacgag
gcccccgtcttttccatggattattatattctggatgtttatgaaaactcccccagcggc
acggaggtgggaacagtcacagctcgagatccggatggagacaacaaacccgtcagatac
gagctggacagcaaagaggaggaggagagctacttccgaatcgatgcgaagagcggagtc
atcagaaccacgcagcctctggaccgggaagacacgccgtggcacaacatcactgtggtg
gcctcggaggttggtaatccggtcctcttcagccacgttcctgtcaccgtccaggtcctg
gacaccaacgacaatccaccggaagtagcagctgatgaggaagtcattgtttgtgagagt
tcaagacctggccaggtgatccagacggtcagagcggtggataaggacgacttcgccaat
ggacagcggttttcttttgctctgccaagccagctccccgttaatcccaacttcaccctg
aaggacaacgaagacagcacggccagcatcatcgccagaagacgccgtttcagccacctg
acgcaggagctgtacgagctgcccatcgtggtgtgggacgggggggagccttcgctgacc
ggcaccagcaccttgacgctgcgggtgtgtccgtgccagcgccacggcaggatccggatg
tgccagggcgaggccttcctctcctctgcggggctcagcacgggggccctgatcgccatc
ctgctgtgcatcatcatcctgctggcaatcgtggttctcttcatcacactgaggcgcagc
aagaaggagcccctcatcatctctgaagaagacattagggagaatgtggtgacctacgac
gacgagggaggcggcgaagaggacacggaagctttcgacatcgttgctctgcgtaatccg
gccgcagcagaggagctgaagttcaggcgggacatccgcccagaagccaggagtcagtgt
ggctttgcgcacggccagcggagcccgtctgtggagctggacgaggtggacgtgcacaag
ttcatcaaacagagactggtggaggctgacatggacgccagcgtgccaccctacgattcc
ctacagacctacgcttatgaaggtcagggctctcctgcagggaccatcagtccgttagac
tctcttggtgtacaatcggagcaggaatacaactacctggatgactggggccccgagttc
cagaaactagcagaactctacggagaagcagagtcggatgtgacaacctag
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