Oryzias latipes (Japanese medaka): 101174832
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Entry
101174832 CDS
T02443
Symbol
taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101174832 (taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101174832 (taf4)
03036 Chromosome and associated proteins [BR:
ola03036
]
101174832 (taf4)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101174832 (taf4)
Coactivators
SAGA/TFTC/STAGA complex
101174832 (taf4)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101174832 (taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
101174832
NCBI-ProteinID:
XP_023812499
LinkDB
All DBs
Position
7:18200474..18218141
Genome browser
AA seq
956 aa
AA seq
DB search
MRFTNERGLAKMAASSDLLGDVFFKTERDEKVKSELIGSLDTESTEESHVNSAGGTQSET
NHADSSAIRSSFNIQGSKMGLSQQELAKAGSGVQRGVSSSAGCLVPRMDGAAGVTPAAEA
VGNPAQSQPQPATASGVVTAASDAASGLEKPEGAQSLNGSAAVTNCHIAESRADSSQPNG
PAPACKEEAAAVQPSTIIRTTLSAQNAPSPGVVPAQPGARTTVPTVTLVKPLMQTSTSSP
VLTSSSPGISVSSSSPVTKSDCTKSVILTGGQAAPPPGATATIRSPGVWPNPRTAAPSTI
AAAPGGVRPPAPQVLAPRLSQPQQNTTNIQNIQLPPGMVLIRSESGQLLMIHQQTLAQMQ
AQSQSQSAMTPRPAAPTSTPPVQTSLQTPGTPLLTRPVTSTTIIKQASPVQTTGIVTTAL
QRPPVLQNTVMLGVTASGQPMGTAAKVQPAAQRVGPLGATGTAVAPTPVSAETLENVKKC
RNFLSTLIKLASGKQSPQTSANVKELIKNLLQAKIEPEDFTSRLYKELSSSPQPYLVPFL
KRSLPALRQMTPDPDAFIQQSLLPLPSTQPVATASTALTAVVLRPPLSTTVTTATSTTKA
TVISLTQTPQSKPGLIVSQQQGTMVRPQVPLAQSPVVTIRGQPHSRIIVGQPQVVKQLTA
VPAVRQTLAPGIRGVQVLGHASVADAHRNRLKEAGGGAFKDDDDINDVASMAGVNLSEES
ARILATSSELVGMVTRSCKDEAFLSTPSLTRIALEIGKKFGVSELGTDVISYISHATQQR
LQNLLEKVSQVAHHKNVTLKEDERCEQVSDVRGQLKFFEQLDQLEKQRKEEQEREILLKA
AKSRSRQEDPEQLRLKQKAKEMQQLELAQIRQREANLAALAAIGPRKKRKTDSPVKGAGA
DGSSSGPSQPGGSGGAGSRQFTRQRITRVNLRDLLFCLENEKETSHSQLLYKGFLK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcacgaacgagcgtggtttggcaaagatggcggcgagctccgatttgctggga
gatgttttcttcaaaacagagagggacgaaaaagtgaaaagtgagctaattggatctctg
gacaccgagtcaacagaagaaagtcacgttaactcagcgggtggaacgcagtctgaaaca
aatcacgctgacagctcggctattcgcagtagttttaatattcagggcagcaaaatggga
ctttcacaacaagagcttgctaaagcagggtcaggagttcaaagaggtgtcagtagcagt
gcggggtgcctcgttccgaggatggacggagcggcgggggtcaccccggcggctgaagcg
gtcggtaaccccgctcagagtcaacctcagccggcaacggccagcggagttgttacggcg
gcatcagacgcggcatccgggctggagaaacccgagggagcccaaagtttgaatggaagc
gccgcggtgacgaactgtcacatcgcagagagcagagccgacagttcgcagcccaacgga
ccggctcccgcgtgcaaggaagaggcagcggctgttcagcctagcactatcattcgaact
actttgagtgctcaaaatgctccctcccccggcgtggttccggctcagcccggtgccaga
acaactgtacccacggtcacgctggtgaagccgctcatgcaaacttccaccagcagcccg
gttctaacctcctcgtcaccgggcatcagtgtttccagtagctcccctgtcactaaatcg
gactgcacgaaaagtgtcatcctgaccggcggtcaagccgcgccgccgccaggcgccacg
gcgaccatcaggagccccggggtctggccgaaccccaggaccgccgctccatcaacgatt
gcagcagctccgggtggagttcgaccccctgctccacaggtgctggctccacggctcagt
cagccccaacaaaacaccacaaacatccaaaacatccagcttcctccaggcatggtcctg
atccgcagtgagagtgggcagctgctgatgattcaccagcagaccctggctcagatgcaa
gcccagtcgcagtcacaaagtgccatgacgccgcggcccgcagcgcccaccagcactcct
cctgtgcagacgtctctgcagactccaggtactccactgctgacccgccctgtcacctcc
accactattataaaacaggcctccccagtccagaccacagggatagtcaccactgcgctg
cagaggcctcctgtgctgcagaacacggtcatgctgggagtgacggcctcaggacagcca
atgggaacggccgccaaagtccagccagcggctcagagggtgggaccgctgggagccacg
ggaacagccgtcgctccaacaccagtctcagctgaaacactggagaatgtgaagaagtgt
cggaactttctctccacgctcatcaagctggcaagtggaaaacagtcgcctcagacttca
gcgaatgtcaaagagctgatcaagaacctgctgcaagcaaaaatagagcctgaggatttc
accagcaggttgtacaaagagctgagctcctcccctcaaccgtacctggttccctttctg
aagagaagcctccccgcgctgcgtcagatgaccccagacccggatgcattcatccagcag
agcctgctgcctctgcccagcactcagccggttgcgacggcctccacggccctcaccgct
gtggtgctgcggcctcctctgtcgaccacagtcaccacagctacaagcacaaccaaagcc
acggtcatcagcctcacccagactcctcagagtaaacctgggctgatcgtctctcagcaa
caaggcaccatggtgaggccacaggtgcctctggctcagtctcctgtggtgaccatcaga
ggacagcctcatagccggattattgttggtcagccacaggtggtaaaacagctaacagca
gttccagctgtgagacagactttggctccggggatcagaggagttcaggtgctcggtcac
gcttcggtagctgatgctcacaggaacaggctaaaagaagcaggagggggagctttcaag
gatgatgatgacatcaacgacgtggcgtccatggccggggtcaacctgtcggaggagagt
gcccgcatcctggcaaccagctccgagcttgttggcatggtgactcgttcctgcaaggac
gaggccttcctgtccaccccgtcccttaccaggatagccctggagatcggtaaaaagttt
ggtgtcagcgagctgggcacagacgtgatcagttacatttctcatgcaacccagcagcga
ctccagaacctgttggaaaaggtctcacaagtggctcaccacaagaacgtcaccctgaag
gaagatgagcgatgtgagcaggtcagcgatgtcagaggacaacttaagttttttgagcag
ctggaccagctggaaaagcagagaaaggaagagcaggagagggagatcctcttgaaggct
gctaagtctcggtcaaggcaagaagatccggagcagctccgactcaaacagaaggccaaa
gagatgcagcagctggagctggctcagatcaggcagagggaagccaacctggcagccctg
gcagccatcggccccaggaaaaaacgcaaaacggactctcctgtgaagggggcgggcgca
gacggctcaagttcgggtccctctcagcccggaggctccggaggagccggctccagacag
ttcacacgtcagcgcatcactcgagtcaacctgcgggacctgctcttctgcctggagaac
gaaaaagaaaccagccactcccagctgctctacaaaggcttcctgaagtag
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