Oryzias latipes (Japanese medaka): 101174874
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Entry
101174874 CDS
T02443
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
ola03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101174874 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
101174874 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101174874 (mnat1)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101174874 (mnat1)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101174874 (mnat1)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101174874 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-UDP
TRAF6_Z2
TRAF3_RING
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
101174874
NCBI-ProteinID:
XP_004082327
UniProt:
A0A3B3I967
A0A3P9HJA2
LinkDB
All DBs
Position
22:complement(12020217..12059479)
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGAGNCVQCNTPLRKNNFRV
QLFEDPTVDKEVEIRKKVMKIYNKRECDFQSLREYNDYLEQVEDIVYNLTNNVEVESTKL
RMEQYQRENKDVIQRNKAKLTREQEELEELLLLEQQSSEQRRLDVLQEEQRQLQAKRKNK
QALLDELEKSKLPATLLLAQHKVRAAQLETEIEQQKQNVKPTSLFSTGIQMNQTVSLQPL
PRIEEALYHYKPLQVETYGPSVPELEQLGRFGYLNHVRTALPQDTAGGYTSALACYRAIQ
DAFSGLFPPKF
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccagggttgtccgagatgcaaaacaacaaaatacaggaatccttcgctgaag
ctgatggtgaacgtctgcggtcacacgctatgtgagaactgtgtggagatgctgtttgtg
cgcggcgccggcaactgtgtacaatgcaacacgccgctgaggaagaacaactttcgggtg
cagctcttcgaggatccgacagttgacaaggaggtggaaattcgaaagaaggtcatgaaa
atctacaacaagagggagtgtgacttccaaagcctcagagaatacaacgattatctggag
caagtggaggacatagtgtacaacctgacaaacaacgttgaagtggaaagcaccaaactg
aggatggagcaataccagagggaaaacaaagatgtcatccagcggaataaagcaaagctt
acacgagagcaggaagagctggaggagctgctgctgctggaacagcaaagcagtgaacag
cggagactggatgtgctgcaggaggagcagagacagctgcaggccaagagaaaaaacaaa
caggctcttctggatgaactggaaaagtctaagcttcctgccactcttttactcgctcag
cacaaagtccgtgctgctcagctggagactgaaatagagcagcagaagcaaaatgtaaag
cctacaagtttgttctctactggaattcaaatgaaccagactgtgtctctgcagcctttg
cctaggatagaggaagctctctaccactacaaacctcttcaagttgagacctacggaccc
tctgtgcctgaactggagcagctgggaagatttgggtatctgaaccacgtgcggaccgcc
ctcccccaggatacagccggaggatacacctctgctttagcatgttatcgagccattcag
gatgcattcagtgggctcttccccccaaaattctga
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