Oryzias latipes (Japanese medaka): 101174911
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Entry
101174911 CDS
T02443
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03020
RNA polymerase
ola04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101174911 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101174911 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101174911 (polr3b)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101174911 (polr3b)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101174911 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
101174911
NCBI-ProteinID:
XP_023811694
LinkDB
All DBs
Position
6:21470563..21495498
Genome browser
AA seq
1150 aa
AA seq
DB search
MEVLGEEFGDMTPQELAAPVNTVAVSLRKNNTQFGPSRRVNADKWKLLPAFLKVKGLVKQ
HIDSFNYFINVEIKKIMKANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHEC
RLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECP
LDPGGYFIVKGQEKVILIQEQLSKNRIIVDQDRKGTVGASVTSSTHEKKSRTNIIVKQGR
FYLRHNTLSEDAPIAIIFKGMGVESDQEIVQMIGTEEHVMANFAPSLEECQKAQIFTQTQ
ALRFLGNKVRRQRMWGGPKKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVI
LAQGENKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVV
KHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTR
KVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIIKLALNLGVEDV
NLLCGEELSYPSVFLVFLNGNILGVIRNHHKLVSTFRLMRRAGFINEFVSISTNLTDRCV
YISSDGGRLCRPYIIVKKGQPMVKSKHIEDLSQGYRNFEDFLHEGLVEYLDVNEENDCQI
ALYEHMINKETTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRN
RIDTLMYLLAYPQRPMVKTKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLD
RGFGRCLVYKNTKCTLRRYTNQTFDKVMGPMLDAATRKPLWRHNILDADGICCPGEKVEN
KQILVNKSMPTVTQTPLEGSAQPGQPQYKEVPISYKGSTDSYIEKVMISSNAEDAFLIKI
LLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGVCPDIIMNPHGYPSRMTVGKL
IELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIY
FGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASML
LLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLKIPYACKLLFQELQSMNII
PRLKLSRYNE
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcctcggtgaagaatttggagacatgactccccaggagttggcggctcctgtc
aacaccgtggctgtgagtttgcgtaaaaacaacacacaatttggcccctcgagacgagtc
aatgcggataaatggaagctgttaccagcctttttgaaggtgaagggtttggtgaagcag
cacatcgactccttcaactatttcatcaatgtggagataaagaagatcatgaaagcaaat
gagaaaatcaccagtgatgctgatcccatgtggtacctgaaatatctaaatatctatgtc
ggcatgcctgatgtggaagaaagcttcaacgttaccagacccgtctctcctcatgagtgt
cgcctcagggacatgacctactcggcacccatcacagtggacatagaatacactcgtggc
agccagaggataatccgaaatgctctgcctattggacggatgccgatcatgctgcgaagc
tccaactgtgttctcacagggaagacgcccatggagttttctaaactaaatgagtgtcct
ctggacccaggaggttacttcatcgttaaaggtcaagagaaagtcatcctgatccaggag
cagctgtcgaagaatcggatcatcgtggaccaagacaggaaggggacagttggagcttca
gttaccagctccactcacgaaaagaaaagtagaactaatataattgtgaagcaaggacgc
ttctacctgaggcataacacgctgtctgaggacgctcccatcgccatcatctttaagggt
atgggtgtagagagtgaccaggagattgtgcagatgattggcacagaggagcacgtcatg
gccaacttcgccccaagcctggaggagtgtcagaaagcccagatcttcacgcagactcag
gctctgcggtttcttgggaataaagtacgcaggcagcggatgtggggcgggcccaagaag
accaagatggaggaggccagggagctgctggcctcgcttatcctcactcacgtgcctgtt
aaagagtttaactttcgagcaaagtgtatttatctggccgtgatggttcggagagtgatt
ctggctcaaggtgagaacaaggtggatgacagagattactatggaaacaagcgtctggag
ctggctggacagctcctgtctttgctgtttgaggatttgttcaagaagtttaactcagaa
ctgaagaaaattgcagaccagatcatccccaagcagagagcggctcagtttgacgtggtc
aaacacatgcggcaggatcagatcactaacggcatggtcaacgccatatccaccggaaac
tggtctctgaagaggttcaagatggaccgtcagggcgtcacccaggttctgtctaggctg
tcttacatttctgctctcggtatgatgaccaggatttcctctcagtttgagaagaccagg
aaggtgagcggaccgcgctctctgcagccgtcgcagtggggcatgctgtgtccgtctgac
acgcctgaaggagaggcttgcggtttggtgaagaacttggctctgatgacgcacatcacc
accgacatggaggacggtccgatcatcaagctggccttgaacctcggggtggaagacgtc
aacctgctgtgtggggaggagctctcctacccgagcgtctttctcgtcttcctcaacgga
aacatcctcggcgtgatacgaaaccatcacaaactggtcagcactttcagactcatgcgc
cgggccggtttcatcaacgagttcgtgtccatctctaccaacctgaccgaccgctgcgtg
tacatctcctctgacggaggacgactctgcaggccgtacatcatcgtgaagaaaggacag
cccatggtgaagagcaaacatattgaagatctttctcagggttacagaaactttgaggac
ttcctgcacgaaggcctggtggagtatctagacgtcaacgaggagaacgactgtcagatc
gccctctatgaacacatgatcaacaaagaaacgacacacttggagatcgagccgttcacg
ctgcttggagtgtgtgcaggcctcattccctacccccaccacaaccagtcgcccaggaac
acgtaccagtgtgctatgggcaagcaggccatgggaaccatcggctacaaccagaggaac
cgcatagacaccctgatgtacctgttggcgtaccctcagaggcccatggtcaaaaccaaa
accatcgagttgattgactttgaaaagctgcctgcgggtcagaatgccactgtggcagtg
atgagctacagcggctacgacattgaagacgctctagtcctcaacaaagcctcgcttgac
agaggatttggtcgatgccttgtttacaaaaataccaagtgcacactgagacggtacaca
aaccagacttttgacaaagtcatggggcccatgctggatgctgctacacgcaaacccctt
tggagacacaacatcctggatgctgatggcatttgctgtcctggtgaaaaagtggagaac
aaacaaattttggtgaataaatcaatgccaactgtcactcagacgccactggagggcagt
gcccagccaggccagccccagtacaaagaagttcccatcagctataaaggttccacagac
tcgtacatcgagaaggtcatgatctcctccaatgctgaagatgccttcctcatcaagatc
ctgctgaggcagaccaggaggccggagattggagacaagttcagcagtcgacacgggcag
aaaggtgtttgtgggctcatcgtgccgcaggaggacatgccgttctgtgactcgggcgtc
tgtccagatatcatcatgaaccctcacgggtatccctccagaatgacggtggggaagctg
attgaactgctggccgggaaagccggagttctggacggacgcttccactatggtacggct
ttcgggggcagcaaagtgaaggatgtgtgcgaggatcttatccgttatgggtacaactac
cagggcaaggactatgtgacatcaggaatcactggagaacccctggaggcttacatctac
tttgggccagtctattaccagaaactgaagcacatggttctggataagatgcacgccaga
gctcggggtcccagagcggttctcaccaggcagcctacagagggacgctccagagacgga
ggtctgcgtctgggggagatggagcgtgattgtttgatcggctacggagcgagcatgtta
ctgctggagcgcctcatgatctccagtgacgcctttgaggtggacgtttgtggacagtgt
ggcctcctgggatactctgggtggtgtcattactgtaagtcatcttgtcacgtgtcctcc
ctgaaaatcccgtacgcctgcaagcttctcttccaggagctgcagtccatgaacatcatc
cctcgactcaaactgtcgcgctacaatgagtga
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