KEGG   Oryzias latipes (Japanese medaka): 101174914
Entry
101174914         CDS       T02443                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101174914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ola03019]
    101174914
   03041 Spliceosome [BR:ola03041]
    101174914
Messenger RNA biogenesis [BR:ola03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101174914
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101174914
Spliceosome [BR:ola03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101174914
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 101174914
NCBI-ProteinID: XP_004070518
UniProt: A0A3P9KAZ6 H2LVA9
LinkDB
Position
7:12838417..12841865
AA seq 329 aa
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVT
YSSVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHL
RDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TKQEMQTAGMGMRGGRSSGSGRPYDYDRGFNQGGRGRYGDGPYNGNGGDGGYGGGPGGPG
GYNSGNRGYNQGYNQGGGGYGGNGYDSNGYGNCGSGNNYNNMGHYDPQASNFGPMKNNFG
GGGGGGGRNFGGYGGGSNNGGGYGRPGRF
NT seq 990 nt   +upstreamnt  +downstreamnt
atgtcgaaagatgtcccacgtgagccagagcagcttcgcaagctcttcattggaggcctg
agctttgagacaacagacgagagcctcagagctcactttgagcaatggggtaccctgaca
gactgtgttgtgatgagggatccaaacagcaagagatcccggggttttggctttgtgacc
tactcctctgtccaagaagttgatgcagccatgtccgcccgtccacacaaggttgacgga
cgggtggtggaacccaaacgagcagtttctagagaggattcaaatcgtccaggcgctcat
attacagtgaaaaagatctttgttggagggatcaaagaagacacagaagagtcccacctg
agggattacttccaacagtttggcaaaattgaagtcattgatatcatgactgatcggaac
actggaaagaagaggggctttgcctttgtcaccttcgacgatcacgattctgttgacagg
attgtcatccagaaataccacacaatcaattcccacaactgtgaggtgaggaaagccctg
accaaacaggaaatgcagactgctggaatgggaatgagaggtggccgcagcagtgggagt
ggaagaccctatgactacgacagaggctttaaccaaggtggacggggcagatatggagat
ggtccttacaacggcaacggaggcgatggcggttatggaggtgggcccggtggtcctggg
ggctataacagtggcaaccgtgggtacaaccagggctacaaccaaggtggtggaggatat
ggtggaaatggttatgatagcaatggttatggaaactgtggcagtggcaataactacaac
aacatgggtcactatgacccgcaggcttccaactttggtccaatgaagaacaactttggt
ggtggtggtggaggaggaggcagaaacttcggtggatatggcggtggatcaaacaatggc
ggtggctatggccgtcctggacgattttaa

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