Oryzias latipes (Japanese medaka): 101174924
Help
Entry
101174924 CDS
T02443
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04137
Mitophagy - animal
ola04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101174924 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101174924 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101174924 (vcp)
03009 Ribosome biogenesis [BR:
ola03009
]
101174924 (vcp)
04131 Membrane trafficking [BR:
ola04131
]
101174924 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101174924 (vcp)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101174924 (vcp)
Ribosome biogenesis [BR:
ola03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101174924 (vcp)
Membrane trafficking [BR:
ola04131
]
SNARE
SNARE associated proteins
Others
101174924 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101174924 (vcp)
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101174924 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
101174924
NCBI-ProteinID:
XP_004072466
UniProt:
A0A3P9KQT6
LinkDB
All DBs
Position
9:13577823..13585517
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGDSKNDDLSTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETIVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSTPGG
SGPSHGAGGAGTGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggagactccaaaaatgatgatttatcaacagcaatcctgaaacaaaag
agcaggcccaacagactgattgttgatgagtctatcaatgaggacaacagtgtagtctct
ctgtctcaggccaaaatggatgagctgcagctcttccgtggagacacagtgctgatgaag
ggaaagaagagacgagagactgtgtgcatcgtactctccgatgacacctgttcagatgaa
aaggttcgcatgaacagggtggtgcgcaacaatctgagagtccgtctcggtgatgtcatc
agcattcagccatgtcctgatgtcaaatatgggaaaaggattcacgtccttccaatagat
gacacagtagagggaattactgggaacctgtttgaggtttacctgaagccatacttcttg
gaggcttacaggccaatccgcaaaggtgacatctttctggtcagaggaggcatgcgtgca
gtggagtttaaggtggttgagacagatccttccccctactgtatcgttgctcctgacaca
gtcattcattgtgagggtgagccaatccggagggaggatgaggaagagtctctgaacgaa
gtgggctatgatgatattggaggagtaaggaagcagttggcccagatcaaagagatggtg
gagctgcctctcagacacccggcactgtttaaggccataggagtcaagccccctcgtgga
atcctgctttatggaccccctggaactggaaaaactttaatcgccagggctgtggccaat
gaaactggagcgttcttctttcttattaatggcccggagatcatgagtaagttggctgga
gagagtgagagtaacctgagaaaggcctttgaagaagctgagaaaaatgctcctgccatc
atttttattgatgaacttgatgcaatcgctccaaagagagagaagactcatggggaggtg
gagaggcgcattgtgtcacagctgctgactcttatggatggtctgaaacagagagctcat
gtgattgtcatggctgccaccaacagacccaacagcatcgatccggctctcaggagattt
ggccgttttgacagagaagtggatattggcatccctgatgcaaccggcagattggagatt
ctgcagattcacaccaagaacatgaaactggctgatgatgtggacttggaacaggttgcc
aatgagacccatggtcatgtaggtgcagatctggctgctctctgctctgaggctgctctc
caggccattagaaagaagatggacctgatcgaccttgaggacgagaccatcgatgctgaa
gtcatgaactcacttgctgttaccatggatgacttcaagtgggctctgagccagagtaac
ccatcagcactgagggagacgattgttgaagttcccaacatcacctgggatgatattgga
ggtctggaagatgttaagagagagctgcaggagttggtccagtacccagtggagcatcca
gacaagttcctgaagtttggcatgaccccttccaaaggtgtacttttctatggtccccct
ggttgtggtaagactctgctggccaaagcaattgccaacgaatgccaggcaaacttcatc
tccatcaaaggacctgagctgctcaccatgtggtttggagagtctgaggccaacgtcagg
gagatatttgacaaggctcgtcaggctgctccatgtgttctcttctttgacgagcttgac
tccatagctaaggctcgtggcggcaacgttggtgatggcggtggagcagctgaccgcgtg
atcaaccagatcctgacggaaatggatggaatgtcgagcaagaagaatgtcttcatcatc
ggagccacaaacagaccagacatcattgaccctgccattctgagacccggccgcctcgat
cagctcatctacatccccttgcccgatgagaagagcaggatcagcatcctgaaggccaac
ctccgcaagagtcccatcagcaaggatgtggacttggacttcctggctaagatgaccaac
ggcttctctggagcagatcttaccgagatctgccagcgggcgtgcaaactggccatcaga
gagagcattgagagtgagatccgcagagagagggaaaggcagaccaacccatctgctatg
gaagttgaagaggacgatcctgttccagaaatcaggaaagaccactttgaagaagcaatg
agatttgctcgccgttctgtcagtgacaatgatattcgcaaatatgagatgtttgctcag
acactgcagcagagccgtggatttggaagcttcaggtttccctctagtactcctggagga
agtggtccaagtcatggtgcaggcggagcgggaactggtccggtgttcaatgaagataat
gatgatgatctttacggataa
DBGET
integrated database retrieval system
