Oryzias latipes (Japanese medaka): 101174998
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Entry
101174998 CDS
T02443
Symbol
abca3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101174998 (abca3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ola02000
]
101174998 (abca3)
Transporters [BR:
ola02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101174998 (abca3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
SRP54
AAA_30
RsgA_GTPase
AAA_29
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
101174998
NCBI-ProteinID:
XP_023813313
LinkDB
All DBs
Position
8:complement(11046771..11068792)
Genome browser
AA seq
1708 aa
AA seq
DB search
MAVVRQFGLLVWKNYLQQKRQILVTLVEILLPLLFSGILIVLRQKVAFKDYPNATIYESY
YVDELPKPFLRSFQLAFVPSNSSVVRRVAEDVRGSLYLSSVHGFETEEQFEEYVKNDPSS
GQLLAAVVFDHPFTHDDDPLPLQVSYHLRFTFTPRNAPPKEKSELNPNSDLDWHTLSLFP
LFQMPGPREQYDKEGGTPGYFREGFLAVQHAVDRAIMHSYNRTAAAALLRQTRVVLSRFP
YPAFIYDVFILAIQNQLPLLLVLSFTYTALNIVRAVVQEKERKLKEYMRMMGLSNWLHWS
AWFLMFFLFLSISVFFVTVLLCIQVSPNGAVLTYSDPTLVFFFLLLFTVATISFSFMISA
FFSRANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHGQKVSACLISNVAMAMGAQLIGMFE
GKGTGIQWSNLFDSVTVDDDFSLAQVLCLLLFDSVLYGLVAWYVEAVFPGEYGVPLPSYF
FLLPSYWCSSPRMALVNEKEEEEDAEKALKGEFIEEEPAGLVSGVKIKHLSKEFKLGNKT
RRAVRDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLYPPSSGRAYINGYDICQDMALIR
RSLGLCPQHDVLFDNLTVREHLLFYAQLKGYSKDKIPDEVDRIIRILNLEDKRRARSKTL
SGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDE
ADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDAFCNVSEITRLVHMYVPNAT
LESSAGAELSYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVGKLVDS
SLDIQAIQLPALQYQHERRSHDWNMEDTSSISGLTDVTDFTDSGTLISEDCSSIKLNTGV
RLHLQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVMALVVARTFPNHQNAPSLNLKLS
RYGPTRVPVALQGGAGPLAHALANTYISQLSTQIGELVNITDFTDYVLTHAEEEGGSFNE
RCVVGAAFRGIGRQFAEATAYFNNQGYHTPATALMMVDNALFKLLAGPNASIQTSNYPMP
RNLSETARSQLTEGKTGFAIAINLMYGMASLSSTFALLLVTESSLKSKHVQQVSGVYLSN
FWFSALLWDLVNFLLPCLLMLVVFQGFGVEAFVDGNHLIDVLLLLLLYGWAVVPLMYLLS
FLFSTAATAYTRLTIFNMISGTATFLAVTIMTIPELNLQHLSHLLDKVFLIFPNYCLGMS
FCQFYQNYQFITFCTSSSLSQIICKYMNITYQENYFSMSEPGVGRFLVALSVQGVVFNML
LFVIELQCVRTICRLLKSLGRRRKQLPLIEDAALVPEDRDVAEERKRVLECQPMMESMVG
SPLILQELSKVYSSGESLLAVDRLSLAVAKGECFGLLGFNGAGKTTTFKMLTGDESVTSG
DAYIDGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLCMYARLRGIPEKYVSGCVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAIT
HIRESGKAIVITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHVE
AELEESDLRVFKDFIESTFPGSQLKDEHQGMVHYHLTDKALTWAQVFGTLEAAKEKYQIE
DYCVSQISLEQVFLSFAQFQHCTQAGRK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtaagacagtttggacttctggtgtggaagaattatctacagcagaaacgt
cagatcttagtaactctggtggagatactccttcccctgctcttctctggcatcctcata
gttctgcgtcagaaggtggcttttaaggactatcccaacgccaccatctacgagagctac
tacgttgatgagctgcctaaacctttcctgcggagctttcagctcgccttcgtgcccagc
aactccagcgtggtgcggcgggtggcagaggatgttcgtggaagcctgtatctctcctca
gtgcacggctttgagacggaggagcagtttgaggagtacgtgaaaaatgacccttcatcg
ggacagctgctggccgctgtggtgtttgaccaccccttcactcatgacgacgacccttta
cccttacaggtgagttaccacctgcgcttcaccttcacgccacgaaacgccccacccaag
gagaagtcggagctgaaccccaacagtgacctggactggcacacgctcagtctcttccct
ctttttcaaatgccaggccctcgagagcagtatgacaaggaggggggcactccaggttat
ttccgagagggctttctggcagtgcagcacgcggtggacagagccatcatgcactcttac
aaccgaacagctgccgcagctctgctcagacagaccagagtggttctgtcgcggtttcct
tatccagcttttatatatgacgtcttcatcctggccatccagaaccagcttccccttctg
ctggtgctcagcttcacctacacggctctaaacatcgtgcgagctgtggttcaggagaaa
gagaggaagctgaaggagtacatgaggatgatgggtctcagtaactggctccattggagt
gcctggttcctcatgttcttcctgttcctctctatttcggtcttttttgtcacagtgctg
ctctgcatccaggtgagtcctaatggggccgtgttgacctatagtgatcccacgctggtc
tttttcttcttgctgcttttcactgtggccaccatcagcttcagcttcatgatcagtgcc
ttcttctctcgagcaaatgtggcggcggctgcaggtggcttcatctacttcctcagctac
ctgccttatttgttcctgtggccacgctacgatctcctcagccatgggcagaaggtgtct
gcttgccttatctcgaacgtggccatggccatgggagcgcagctcatcggaatgttcgaa
ggcaaagggacggggatccagtggtcgaacttgtttgattctgtaacggtggacgatgac
ttctccctggctcaggttctgtgcctgctcctgttcgactctgttctttatgggctggtg
gcctggtacgtggaggccgtttttcctggggagtacggagtgcctctgccttcctatttc
ttcttactgccttcatactggtgcagcagccctcgcatggctttggtgaatgaaaaggag
gaggaggaggatgcagagaaggctctgaaaggggagtttatagaggaggagccagcagga
ctggtctctggggtgaagattaaacacctctcgaaggagttcaagttgggcaacaaaacc
cggagggctgtcagagacctgactttgaacatgtttgaggggcagattacggtgctgttg
ggacacaatggtgctggaaagaccacaacactgtccatgctcacaggtctttaccccccc
tccagcggcagggcctacatcaacggctacgacatctgtcaggacatggctctgatccga
cgcagtctgggcctttgtccacagcacgacgttttatttgataacctcacagtgcgagaa
cacctgctcttttatgcacagcttaaaggctactccaaggacaaaattccagacgaagtg
gatcggatcattcgtatcctgaacctagaggacaagagacgagctcgctccaaaaccctt
tctggtggcatgaagagaaagctttctataggcattgctctcattggagactctaaagtt
gtcatgttggatgagcctacttcgggtatggatccgtctgcacgacgggccacgtgggac
ctcctgcagggggagaaacggggccgcaccattttactcaccacccatttcatggatgag
gccgatctgctgggagatcggattgccatcatggcaggaggggagctgcagtgctgcggc
tcgccactcttcctgaagaacaaatatggtgctggctatcacatggtgatagtgaaagac
gctttttgtaacgtgtcggagatcacccgcctggttcacatgtatgttccaaatgctacg
cttgagagcagcgccggagcagagctctcctacatcctgcctaaagaaagcaccagcagg
tttgaactactgtttgctgagctggagatgaacagagacgagctggggattgccagctat
ggagcctcagtgacaactatggaggaagtgtttctgagagtaggaaagctggtggactct
agtttggacatccaggccatccagctgccggctctacagtaccaacatgagagacgctcc
catgactggaacatggaggacacgagcagcatcagcggcctcacagacgtcactgacttc
acagacagcggcacgctcatctcagaagactgctccagcatcaagctgaacaccggagtc
cgactgcacctgcagcagttctatgccatgttcctgaagagggcgctgtacagctggaga
aactggaaggtgatggtagcccagttcctggtccctctgatcttcaccgtcatggcctta
gtggtggcacgcacctttcccaatcaccagaatgctccttcattgaatttgaagctcagt
cgatacggccccaccagggttcctgttgccctgcagggtggggcaggtcccctcgcccat
gctttggcaaatacctacatttcccagctatctacccagataggtgaactggtcaacatc
acagacttcactgattacgtcctgacccacgcagaggaggagggcggcagcttcaatgag
cgctgcgtggtgggtgctgctttccggggcattggccggcagtttgctgaagcaacggcg
tacttcaacaatcagggctaccacacccccgccacagccctcatgatggtggacaacgcc
ttgttcaaacttctagccgggccgaacgcttccatacaaaccagcaactaccccatgcct
cgcaatctgtccgagaccgcacggagccaactcacagagggaaagacgggctttgccata
gccatcaacctaatgtacggcatggcgtccctgtccagcacgtttgccctgctgcttgtc
accgagtcatctctcaagtctaaacatgtgcagcaggtcagcggcgtctacctgtccaat
ttctggttttccgccctgctgtgggacctggtcaacttcttgctgccttgccttctcatg
ctggtggtgttccagggattcggagtggaagcttttgtggacggcaaccacctcatagac
gttctgttgttgctgcttctgtacggctgggctgtggtgcctctgatgtacctgctcagc
ttcctcttctccactgctgccacagcctacacgcgcctgaccatctttaacatgatctct
ggcactgccacctttttggccgtaaccatcatgacgatcccagagttgaatcttcagcat
ttgtctcacttgctggataaggtgttcctgatttttccaaactactgcctgggcatgtcc
ttctgccagttctatcagaactatcagtttatcacattttgcacatccagttctctgagt
caaatcatctgcaagtacatgaacatcacataccaggaaaactacttctcgatgtcagag
cctggcgtcgggcgctttcttgtggccttgtcggtgcagggggttgtcttcaacatgctc
ctctttgtcatcgagcttcagtgcgtgcgcaccatctgccgtctcctcaaatctctgggt
agacgacgcaaacagttgcctttaatagaggacgcagccctcgttccagaggacagagat
gtggctgaagagaggaagagagttctggagtgtcagcccatgatggagtcgatggttgga
agccccctcattctgcaggagttgagcaaggtctatagcagcggggagagccttctggct
gtggacaggttgtctctcgccgtcgcgaaaggagaatgctttgggcttttgggcttcaac
ggagccgggaagaccacaacttttaagatgctgacgggagatgagagcgtcacatctggt
gatgcctacattgatggttacagcatcttgagggacattaagaaggtccagcagcgaata
ggttactgtcctcagtttgatgctgttctggaccacatgacaggaagagagactctgtgt
atgtatgccaggctcagaggaattccagagaagtacgtttctggctgcgtggagaacgtc
ctaaggtcgctgcttctggagcctcatgctgataaacttgtccgcagctacagtggaggc
aacaagaggaaactgagtgcaggcatggctctgatcggggggcctccagtcattttcttg
gatgaaccttcaacagggatggacccagtagctaggaggcttttgtgggacgccatcact
cacattagggagtctgggaaggccatagtcatcacttctcacagtatggaggagtgtgaa
gctctgtgcaccagactggcagtgatggtcaatggccagttcaagtgcctgggaagcccc
caacacctgaagagcaagtttggcagcggctacactctgctggctaaagtacatgtggaa
gcagaattggaagaaagcgacctgcgtgtgtttaaagatttcattgaaagcactttccca
ggaagtcaacttaaagatgagcaccagggaatggtgcattaccacttgaccgacaaagca
ctgacatgggcacaggtgtttggcactttagaagcagccaaagagaaataccaaatcgag
gactactgtgtgagccagatctcgctggagcaagtgtttctcagctttgcccagttccag
cattgcactcaggctgggaggaagtag
DBGET
integrated database retrieval system
