Oryzias latipes (Japanese medaka): 101175061
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Entry
101175061 CDS
T02443
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101175061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
101175061
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
101175061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
SAM_1
RBR
SAM_PNT
SAM_2
Motif
Other DBs
NCBI-GeneID:
101175061
NCBI-ProteinID:
XP_011487047
UniProt:
H2LEW7
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All DBs
Position
3:13997136..14020085
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AA seq
677 aa
AA seq
DB search
MGRTPQRDQKDEKKEKRSSITAGSALDKSNDPFSWEDYLKETSSTAASPSCFKQARVPPS
NDFKAGMKLEARDPRNSNSVCIATVMGMMGTRLRLRLDGSDNTNDFWRLVDSLDIQPIGT
CERNGDMLQPPLGFRMNASSWPMFLLRTLSGAEMAPASAFKKEPPSPAKNYFQPGMKLEA
VDRKNPYLICPATVGEVRGQEIFVMFDGWRGAFDYWCSYDSRDIFPVGWCALTKHSLQPP
GNFFTLPGALLSPVSTTSATRRSSYSSSSSMQTSYRLPHPLPPLPVRKGVRGRRPKSQTI
ALLKAAAEAAAAAAVNGASQSQVKTSSETQLAPRPHKKRGPKPKGKKKPLVEQSLGASPE
TTPPPETRLSASHVSVENSLSNSSNVVCTVCVYVNKHGDNGPHLDRKLVQQLPDHFGPAP
VNAVLQQAVQACVDCTFKPSVLLLFLQSQSHTGGEVIRVRSEHGIRYVKLPSVSSASSVL
RFLENMCQHLDSDSLFSSQPFSPYSSNTRFYSRTKSEPSSVTENGLSKDNSSKDVTPSAR
SHHNTLDYRAAKRERAYYPGQTQPPLRRVSSNPTEISPVSTYRRVEASSTTGPDHMKQDK
VGLGNNATSWTVDDVIRFVQEADPQTLGPHIDLFRKHEIDGKALMLLRSDVIMKYMGLKL
GPALKLCHHIEKLKQAK
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaacaccgcagagagatcaaaaagatgagaagaaggagaaacgcagcagcatc
acagcaggctcggccctcgacaaatcaaacgatccgttcagctgggaggactatctgaag
gaaacctcctccactgcagcgtcaccgtcctgctttaaacaggccagagtccccccctcc
aatgacttcaaagcaggcatgaagctggaggcacgggatcctcgcaactccaactcagtg
tgcatcgccacggtgatgggcatgatgggcacgcgcttacggttacgtctggatggcagt
gacaacaccaacgacttttggcggctggttgactctttagacatccaaccgatcggaacc
tgcgagaggaacggggacatgctgcagccaccgctaggtttccggatgaatgcatcctca
tggcccatgttcctcctgcgtacacttagtggtgcagagatggcccctgcttctgctttt
aagaaggaaccacccagccccgctaaaaactactttcagccaggcatgaaactggaggcg
gtggacagaaagaacccttatctgatttgtcctgccacagtgggagaggtcagaggtcag
gagatttttgtcatgtttgatggctggcgaggcgcctttgactactggtgttcctacgac
tccagagacatcttccccgtgggctggtgtgctctgaccaaacacagtttacagccacct
ggaaatttctttaccctcccaggcgctctcctttccccagtttctaccacctcggcaaca
cgtcgctcctcttacagctcctcctcctccatgcagacctcataccgactgccccatccc
ttgccgcccctaccggtccgcaagggtgtgcgaggtcgccgtcctaagtcccagaccata
gctttgttaaaggcagcagctgaggctgcagcagcagccgcagtaaatggagcatcgcag
agccaagtgaagaccagctctgagactcagctggcccccagaccacacaagaagagagga
cctaagcctaagggcaagaaaaagcccttggtggaacaatccctgggggcatcgccagaa
acgactccacctccagaaacgagactgagtgccagccacgtctcagtggaaaacagccta
agtaacagctcgaatgtagtttgtacagtgtgtgtctatgttaacaagcacggtgacaat
gggccacatctcgaccgaaaactagtgcagcagctgccggatcactttggtcctgctccg
gtgaatgcagtgcttcagcaggcggtccaggcctgcgtggactgcacgttcaaaccctct
gtgctgctgctctttctacagagtcagtctcacacaggaggagaggtcatcagagttcga
tcggaacatggcatccgttatgtgaagctaccctctgtctccagtgcatcttcggtccta
cggtttttagagaacatgtgccaacatctggacagtgacagtctgttcagctctcaacca
tttagcccctacagcagcaacacacgcttttacagcagaaccaaatcagaaccatcctct
gtcactgagaatggcctttctaaagacaactcttcaaaggatgtgactcccagcgcccgc
tcccatcacaacacactggactacagagctgcaaaaagggaacgggcgtattaccccggg
caaacgcagcccccacttcggcgagtcagctccaaccccactgagatcagcccagttagt
acatacagaagagttgaggccagctcaacaacgggtccagaccacatgaaacaggacaaa
gtaggtttgggcaacaacgctacttcatggacagttgatgatgttatccggttcgttcag
gaagctgatcctcagactcttggcccgcacatcgacctgttcagaaaacatgagatcgac
ggcaaggccttgatgctgctgcgcagtgatgtcattatgaagtacatgggcctaaagcta
ggcccggcgcttaaactgtgccatcacatcgaaaaactaaagcaggccaaataa
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