Oryzias latipes (Japanese medaka): 101175296
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Entry
101175296 CDS
T02443
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101175296 (lrba)
Membrane trafficking [BR:
ola04131
]
Endosome - Lysosome transport
Others
Others
101175296 (lrba)
Endosome - Golgi transport
101175296 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101175296 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML
WDR55
KNTC1_N
WD40_MABP1-WDR62_1st
EIF3I
SUKH_6
Motif
Other DBs
NCBI-GeneID:
101175296
NCBI-ProteinID:
XP_023813444
LinkDB
All DBs
Position
1:complement(18984907..19155846)
Genome browser
AA seq
2871 aa
AA seq
DB search
MASAEPAADGAGAAALNPGVPIRGIRMKFAVLAGLVEVGEVSNRDIVETVFNLLVGGQFD
LEMNFIIQEPESIVCLVELLDKCEPTCQAEIWSIFTAILKKSVRNLQACTEVGLIQQVLQ
RISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGEKGQWPCHAVKLLSVLKYMAL
RNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKDKPYLYCFRT
NKGLGYSAHFVGGCLIVTSLKSKGKGFQHCVKYDFKPQKWYMVTVVHVYNRWKNSEISCY
VNGELASFGDIPWFVNTSDTFDKCFLGSSETADVNRVFCGQMGAVYLFAEALSAAQILAI
YQLGPGYQGTFKHRAESDLLFAEHHKTLLYDGKLSSSIAFTYNPRATDAQLCLESSPKDN
ASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYRQPSSQELDTSVCW
TLLSFMMELLKNSVAMQEQVLACKGFLVIGYTLERSSKVHVTRPVLDIVLAFSRYLSNLQ
NGILLLKQLCDNILFNPAIWIHAPAKVQLTLYTYLATEFISTVTIYNAIRRVGTVLQVMH
TLKYYYWIVNPQDRSGVVPKGVDGPRPNQKELFSLRAFLLLFIKQLIMKDHGVKEDELQS
ILNFLLTMHEDENLMDVLQLLVALMSEHPGSMIQAFDQRNGIRVVYKLLGSKSEGIRVQA
LKVMGYFLKSLSPKRKTEVMMSNGLFSLMSERLALHSNQFTMTTYNVLFEILTEQICTQV
IHKQHPDPDSTVKILNPQILKVIAALLKSSPQSPESMEVRRVFLSDMIKLFNNSRENRRS
LLQCSVWQDWMLSLCFINPRNSEEQKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSIT
HSKVAFEQHKENLSRMFRQYQDQEFAGSGGAIRTISGVSESSEATTCINGSSAEETAPST
VIELTVDGVSQKSLDSASNSTLTSRPRSDSEDREPASITVSNILGRDEDKEQKGAEENSS
DGLDVGKENEVAVIEMTNSKEPDSAPSRSDDPAAESDDKKPENKDASSSSEAENPPEKAD
EAEQTSSEPAASLENSGAGGASIFNEDLVDMSSVSDQVQPSDADDSLEESYVSAATGEEG
EVGEKAAGEADSKRKSSEQGEEEVKSEEQSENQESMEQEKVDEKNPCLENENTSIVAPQQ
SDAGAPKEDVGNVQSSSDTDTKDQQPSDTTPTSSSQEAPDQPSKAGDTTTAEETQSAAPD
SNISSSDTPRSPDSHSKTKEIKIARLDVSNVASDTRGLELKDASSADTNQGQAVAAAPEA
GSSSGQQREGGTPAPRSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQMWRSNSTKTIPDI
VNNSENIVFVHNSVHLISQVVDNLIMACGGILPLLSAATSSSHELENIEPSQGLTLEASV
TFMQRLINLADVLIFASCLNFTEIEAEKNMSSGGILRQCLRLVCAMAVRNCLECQQTQLK
HGAESVVRSHPAMPSTLLGTAKSATAQSPVDAVTGGMSPIRDLDRLLQDMDINRLRAIVF
RDIVDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKRHPQRSQSARSSDSGAVPGGTE
VDGSSSLRRYDSGIGEDPTSAAASEADLSSSGMAHGPDAVSEALSTLSSEVRPALSADSK
GKNVKDILRSLVSPPAEDVMVDPALLPPAFLGSVCDVARDSSLQFRSFDRSVVVAPKKMS
AMPSTATSKSAPTPTAGSGAPVDNVAVVSSGDTSQSTSADAAASGGQVPPSPSLPSVPPL
SPVTQNTAPSMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVC
MKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFIL
SRQRAEDIHKHAEFESQCAQYAAEKRDEEKMCDHLIRAAKYRDHMTGTQLIQKIVNILTD
KHGAWGNSSISRPREFWRLDYWEDDLRRRRRFIRNPFGSSHSEATLKAAAEHASDEDILK
GKQSIRNQVLGNQNSESETSLEGEDDTLSSLEEKDLENLTGPVNLSTSAQLVAPAAVVKG
TLSVTASELFFEVDEDEPSFKAIDPKILAYTEGLHGKWLFTEIRAVFSRRYLLQNTALEV
FMANRTAVLFNFPDAATVKKVVHCLPRVGVGTSFGLPQTRRISLATPKQLFKASNMTQRW
QRREISNFEYLMFLNTISGRTYNDLNQYPVFPWVITNYDSEELDLTLPSNFRDLSKPIGA
LNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTSSFTLMWLLRIEPFTTFFLNFQGGKFDH
ADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMEDGTVVSNVVLPP
WAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEATRALNVYYYVTYEGAVNL
SSINDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVYLLLQTPLMFTEQMQQDVIM
VLKFPSNSPVTYVAANTQPGLTSAAIITVTANRLFAVNKWHGLTGHQSSAEQQYQLPVEI
DPLIASNVGAHRRQISDLLDQSIQISSQCFVITADNRFILLCGFWDKSFRVYSTDSGKLT
QIVFGHRDVVTCLARSESYIGGDCYILSGSRDATLLLWYWNGKLCSIGETPGTFTTPRAI
LTGHDCEVTCASVCAELGLVISGCKEGPCLIHSMNGDLLRTLEGPDNCLQPRLIQSSSEG
HCVVYYEKGQFCLFSVNGKLLAHMEVEDSIKAMLLSRDGQYLLTGGDGGVICVWQVYNLK
QLFSYPGCDAGVRSMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8616 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgcggagccggcggcggatggagctggcgccgcggcgctcaaccccggagtg
cccatccgcggaatacgcatgaaattcgccgtgctggccggcctggtggaagttggggaa
gtttccaaccgggacatcgtggagacggtcttcaacctgctggtgggcggtcagttcgac
cttgagatgaacttcatcattcaagaaccagagagcatcgtgtgcctggtggagctgttg
gacaaatgcgagcccacctgtcaggctgagatatggagcatcttcaccgccatcctcaag
aaaagtgtccgtaacctgcaggcgtgcactgaagtgggtcttattcagcaggtgctccag
cgcatctccaccactgacagcatgatagcagacctgctggtggacatgctgggtgttctt
gccagctacagcatcacagtgaaagagctgaagcttttcttcagcaagctgcaaggggag
aaaggccagtggccatgtcatgcagtgaagcttctgtcagtgctgaagtacatggctctc
aggaacggtcccgactcgttcttcagctttccagggaaaaatgctgctgcaatagctctg
ccccccatagcaaaatggccatatcagaatggatttacatttcacacgtggctgcgaatg
gatcctctgaacaacatcaatgtggacaaagacaagccttacctttactgcttccgcacc
aataaaggcctggggtattcagcacactttgtaggcggctgtttgatagtgacgtcgcta
aaatcaaagggcaaagggttccagcactgtgtgaagtacgactttaagccacagaagtgg
tacatggtgactgtagttcacgtctacaaccgctggaaaaacagtgaaattagctgctat
gtgaacggagaactggcttcctttggggatattccctggtttgtcaacaccagtgataca
tttgacaagtgtttcctgggatcatcagagacggcggacgtgaaccgtgtgttctgtgga
cagatgggggcagtttacctgtttgcagaagctctcagcgccgctcagattttggctatc
tatcagctgggtccgggctaccagggcacgttcaagcaccgggccgagagcgacttgctg
tttgcggagcatcacaagactcttctgtatgacggcaagctgtcctctagcattgctttc
acatacaacccgcgcgccacagatgctcaactctgcctcgagtcctcccccaaggacaat
gcctccatttttgtgcactcaccccacgcactgatgctgcaggacgtgaaggctgtggtg
actcactcagtccagagcggcattcactccatcggtggcgtgcaggtcctcttccctttg
tttgcacagctggattaccgccagccttccagccaggaactggacacctctgtttgctgg
actttgctctccttcatgatggagctcctgaagaactcagtggctatgcaagagcaggtt
ttagcctgcaaaggcttcctggtcattggctacacgctggagaggtcttccaaggtgcat
gtgacgcgacccgtcctggacatcgttctggccttttcaagatatctcagcaacttgcag
aatggcatcttgctactcaagcagttgtgtgataacatcctgttcaaccctgccatctgg
attcacgcgcctgccaaggtgcagctgactctctacacttacttggcgacagagttcatc
agcactgtgaccatctacaatgcaatacggagggttggcactgtgcttcaggtcatgcac
acactaaaatactactactggatcgtcaaccctcaagaccgtagtggagtggtgcctaaa
ggcgttgatggtccgaggccgaaccagaaggagctcttctctttacgagcatttctgttg
ctgttcatcaagcagcttataatgaaggatcatggggtgaaagaagacgagttgcagagt
atcctcaacttcctccttaccatgcatgaggatgaaaacctcatggatgtactgcagctg
ctggtggctctaatgtctgaacatcctggctcaatgatccaagcctttgatcagagaaat
ggaattcgagtggtttataagcttttgggctcaaaaagtgagggaatcagagtccaggcg
cttaaggtcatgggctactttctgaaaagcctgtcaccaaagaggaaaactgaggtcatg
atgagtaacggcctgttctcgctgatgagcgagcgcctggcgctccactccaaccaattc
accatgacaacctacaacgtgctctttgagattctcacagagcagatctgcactcaagtg
atccataaacagcacccagacccagactccactgtgaagattctcaacccacagattctc
aaagtgatagctgcactcctgaagagttctccccaatctcccgagagcatggaggtgcgc
agggtcttcctgtcagatatgatcaaactgttcaacaacagcagagaaaaccgcaggagc
ctgctgcagtgctccgtatggcaggactggatgctctctctgtgcttcatcaatccaaga
aacagcgaggagcagaaaatcaccgagatggtgtacgccatcttccgcattctgctctac
cacgccatcaagtatgagtggggcggctggcgcgtctgggtggacacactgtccatcacc
cactccaaggtcgctttcgagcagcacaaagaaaatctctctcggatgttccgtcagtac
caggatcaggagtttgctggctctggaggcgccattcgcaccatctctggtgtcagcgaa
agctctgaggctacaacatgtattaacgggtcgtcagcagaggagacggcgccctccact
gttattgagctgacggtggacggtgtttctcagaaatccctcgactcagcatccaactcc
acgctaacctccaggccacgctcggacagtgaggatagggagcccgcatccatcactgtg
tccaacatcttgggcagagatgaagacaaagaacagaagggggcggaggagaactccagt
gatgggttggatgttggaaaggaaaatgaagttgctgtgattgaaatgaccaactctaaa
gagcccgattcggcgccatccagaagtgatgacccagctgctgagagcgatgataaaaaa
ccagaaaacaaagacgcgtcctcgtcctctgaagccgaaaaccccccagaaaaggcagat
gaggccgagcaaacgtcatctgaacctgcagcctctctggagaactccggagctggtgga
gcttctatcttcaatgaagacttggttgacatgtcatctgtaagtgaccaggttcagcca
agtgacgctgatgatagtttagaggagtcttatgtttctgccgctactggagaagaaggt
gaggtaggggaaaaggcggcaggtgaagctgatagtaaaaggaaatccagtgaacaggga
gaagaggaggttaaaagtgaagaacagtcagagaatcaggagagtatggaacaagaaaag
gtagatgagaagaatccttgtttggaaaatgaaaacacttcaattgtagcaccacaacag
agtgacgccggagcacctaaagaggatgtcggcaatgtacagtcttcctccgataccgat
acaaaggaccagcaaccgtcggacaccacaccgacctcttcatcccaagaggctccagat
cagccttcaaaggctggtgacacgacaaccgcagaagaaacccagtctgctgctcctgac
agcaacatctccagctctgacacacccaggagcccagattctcacagcaagaccaaggag
atcaaaattgccagactggatgtgtccaatgtggcgtcagacaccagggggcttgaacta
aaagatgcctcctcagcggacacaaaccagggtcaagcagttgcagcagcaccagaggca
ggaagttcttcaggccagcagagagaaggcggcacgccagcgcctcgctccaccatgttc
cgcatcccagaatttcgctggtcccacatgcaccagcgccttctcaccgacctgctcttc
tctatagagacagatgtccagatgtggagaagtaactccacaaagacgattccggacatt
gtgaacaacagcgagaacatcgtgttcgtccacaacagcgttcacctaatctcccaggtc
gtggacaatctcatcatggcttgtggaggcattttacctctgctgtctgctgccacgtct
tcctctcatgaactggagaacattgagccgtctcaaggcttgactcttgaggcttcggtt
accttcatgcagcgcctcatcaacctcgcagatgttctcatttttgccagctgtctgaac
ttcacagagatagaagcggagaaaaacatgtcctctggggggattctgcggcagtgcctt
cgccttgtgtgtgctatggcagtgagaaactgtctggagtgccagcaaacccaattaaag
catggcgcagaaagcgtggtgcgcagccacccagccatgcccagcactttactcggaaca
gctaaatctgcgactgcgcagagtccagttgatgcagtgacgggcggcatgtctccaatc
agagatctggaccgcctgcttcaggacatggacattaatcgcctcagggccattgtcttc
agagatatcgtggacagtaagcaggctcagtttttggctcttgcggtggtttacttcatc
tcagtcctcatggtttccaagtaccgggacatcttggagccacacaatgataagaggcac
cctcaacgatctcagtctgccagaagctcagacagtggagctgttcctggtggaacagag
gtggatggcagctcctctctccgacgttatgattccggtattggcgaagaccccacctct
gcagcagccagtgaagcagacctgtcatcctctggcatggctcacggaccagacgccgtc
tcagaagcgttatcgacactttcatctgaggtcagacctgctctgtccgctgactcaaag
ggcaagaatgtgaaagacatcctgcgcagcctggtgagccctccggcagaggacgtcatg
gtggaccccgcattgctgccaccggccttcctgggatctgtgtgtgatgtggccagagac
tcctccctccagttccgttcttttgatagaagtgtcgtcgttgctcctaagaaaatgagc
gcaatgccatctacagctacttccaagtcggccccgacgcccactgctggatctggagcc
ccggtggacaatgttgctgtcgtgtcgtctggtgatacctcccagagcacctctgcagac
gctgcagcttcaggcggccaggttccacccagcccgagcctgccatctgtccccccactg
tcccctgtgacccagaacacagcccccagtatgagtatctctgagcgtctggaacatgcc
ctggaaaaggcggcccccctgctgagggagatcttcgtcgactttgcgccctttctttct
cgaaccctgctgggcagccatgggcaggagctgttaatcgagggcaccagtctggtctgt
atgaagtccagcagctctgtggtggaactggtcatgcttctgtgttcacaggagtggcag
aactccatccagaagaatgctgggctcgccttcatcgagttggtcaacgagggaagactt
ctcagtcataccatgaaggaccacctggttcgtgtggctaatgaggctgagtttatcctg
agtcgacagagggctgaagacatacataaacatgcagaatttgagtctcaatgtgctcag
tatgcagccgagaagcgagacgaggagaaaatgtgcgaccacttgatccgagcagccaag
tacagagaccatatgacaggaacgcagctcatccagaagatagtaaacatactgactgac
aaacatggagcctggggaaactcttccataagccggccgagggagttctggcgcctggac
tactgggaggacgatttaaggcggcgacgtcgctttatcaggaaccctttcggatccagt
cactcagaagccacgctcaaagcggcagccgaacacgcgtctgatgaggatatcctcaag
ggcaagcagtccatcaggaaccaggttctgggaaatcagaactctgaaagcgagacgtca
ctggagggagaggatgacactctgtcatctttagaggagaaggacctggagaacctaaca
ggcccggtaaacctgagcacgagcgcacagctcgtggctccggccgcggtggtgaaaggc
accctgtccgtcaccgcctccgagctcttctttgaggtggatgaggacgaacccagcttc
aaggccatcgatccaaagattttagcctacacagaggggcttcatggaaaatggcttttc
acagagatccgagctgtcttttccaggcgttaccttctccaaaacactgcactggaagta
ttcatggcaaaccgaacggccgtcctattcaactttccagatgcagccactgtaaaaaag
gtggttcactgccttcctcgtgttggagtgggcaccagttttggcctcccacagaccaga
cgcatctctttagctacaccgaagcagctctttaaggcctcaaacatgactcagcgctgg
cagcgccgtgagatatccaacttcgagtacctgatgtttctaaacaccatctctggtcgc
acctacaatgacctgaaccagtacccagttttcccctgggtcatcactaactatgattcg
gaggaacttgacctcactttgcctagcaacttcagagatctgtccaagccaattggagcg
ctgaaccccaagagggcagcattcttctcagaccgctacgagtcatgggaggatgatcag
gtgcccaaattccactatgggacacactactccacctccagcttcaccttgatgtggctg
ctccgcatcgagccgttcaccacatttttcctcaacttccaaggaggaaagtttgaccat
gctgatcgcaccttctcatcagtgtccagggcatggaggaactgccaaagagacacgtct
gacgtgaaggagctgattccagagttctactatctccctgagatgtttgtcaacagcaac
aattacaatctgggagtgatggaggatggcactgtcgtctccaacgtagttcttccgcct
tgggccaaaagtccagaggagtttgtgcgcattaatagactggccctggagagcgaattt
gtgtcctgccagcttcaccagtggatcgatctgattttcggttacaagcagcagggaccg
gaggccaccagagccctcaatgtttattattatgtgacgtatgaaggggccgtcaacctc
agctccatcaatgaccccatgctgagagaggcagtggaatcccagatcaggagctttgga
caaactccttgccaattactgattgagccccacccaccccgaagctctgccatgcaagtg
tatcttctcctgcagactccactgatgttcacggagcagatgcagcaagatgttatcatg
gtgctgaagttcccatccaattcccctgtcacatacgtagcagccaacacgcagccgggt
ctcacttcggctgccatcatcaccgtcactgccaaccgcctctttgccgtcaacaaatgg
cacggcttgacaggtcatcagagctctgcagagcagcagtaccaacttcctgtggaaatt
gaccctctgatagccagtaacgtgggcgcacaccgacgccagatctcagacctgctggat
cagagcattcagatcagctcccagtgtttcgttatcacagcagacaaccgtttcatcctc
ctgtgcggcttctgggacaagagcttccgggtctactccaccgactcaggaaaactaact
cagattgtgtttggccatcgggacgtggtgacctgccttgcccgctccgagtcatacatt
ggtggagactgctacatcctgtcaggctccagagatgccaccttgctgctgtggtactgg
aacggaaagctctgcagcatcggagaaacgccaggcacatttaccacgccaagggccatc
ctgacgggccacgactgtgaggtgacctgtgccagcgtctgtgcagagttgggtctggtc
atcagtggctgcaaagagggtccttgtctgatccattccatgaatggggacctgctgcgg
accctggaagggccggacaactgcctgcagccccgactcatccagtcctccagcgagggt
cactgcgtggtttactacgagaaggggcagttctgtttgttcagcgtcaacggcaaactg
ctggcccacatggaggtggaggacagcatcaaggccatgcttctcagtcgggatggccag
tatttgctaacaggaggagatggaggcgtcatttgcgtctggcaggtctacaacctgaag
cagctcttcagctaccccggctgtgatgctggcgttcgctccatggccatgtcacacgac
caaaggtgcatcataacaggcatggcgtccggaagcatcgttctcttctacaacgacttc
aacaggtggcatcacgagtaccagacccggtactga
DBGET
integrated database retrieval system
