Oryzias latipes (Japanese medaka): 101175346
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Entry
101175346 CDS
T02443
Symbol
chrnb2
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04080
Neuroactive ligand-receptor interaction
ola04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101175346 (chrnb2)
04082 Neuroactive ligand signaling
101175346 (chrnb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101175346 (chrnb2)
Ion channels [BR:
ola04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
101175346 (chrnb2)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
101175346
NCBI-ProteinID:
XP_023819667
UniProt:
A0A3B3HV55
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Position
16:18276116..18299796
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AA seq
534 aa
AA seq
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MDGWLPLLALLAMAGGSLGADTEERLVEHLLNPAHYNKLIRPATNGSELVTVQLMVSLAQ
LISVHEREQVMTTNVWLTQEWQDYRLTWVPEEFDGMLKVRLPSKHIWLPDVVLYNNADGV
YEVSFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTLRFRSWTYDRTEIDLV
LRADVASMDDFTPSGEWDIIALPGRRNENPADPAYVDITYDFIIRRKPLFYTINLIIPCV
LITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMV
LVTFSIVTSVCVLNVHHRSPTTHTMPPWVKLVFLNKLPALLFMRQPRNSCERQRLRQRRR
AQEQREGGMMGVGVGGAGGNGGGASTAVFGKDDSDPCTCYVNRASVKQFGGDLGGAGGGS
MDGLNRVREGREGGAGILPRGKQAAGGPALTQALLAQACPGFEEAVEGVRFIANHMKSED
DDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTLGMFLQPLFQNYTVKTIASTAG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggacggctggctgccgctgctggccttgctcgccatggcgggaggcagccttggggcg
gacacagaggagcggttggtggaacatcttctcaacccggctcactacaacaaactgatc
cgtcctgccactaatggttccgagctggttactgtgcagctgatggtgtcactagctcag
ctcatcagtgtgcatgaaagggagcaggtgatgaccaccaatgtctggttaacccaggag
tggcaggactatcggctcacttgggttcctgaggagtttgatggcatgctgaaggtcagg
ctgccctcaaaacacatttggttgcctgatgtggttctttacaacaatgctgatggggtg
tatgaggtgtcgttctactccaacgcagtggtgtcctatgatggcagcatcttctggttg
ccgcctgccatctataagtccgcctgtaagatcgaggtcaagcattttccctttgaccaa
cagaactgcacgctgcgatttcgctcctggacttacgaccgcactgagatcgatctggtg
cttcgcgcagacgtggccagcatggatgactttacgcccagtggggagtgggacatcatt
gccctgccagggagaagaaatgaaaacccagctgacccagcttatgtggacatcacgtac
gactttatcatccgcaggaaaccccttttttataccatcaatctcatcatcccctgtgtg
ctcatcacctctctggccatcctggtcttctacctgccctcagactgtggagagaagatg
actttgtgcatctcagtactgctggctctcactgtgttcctgctgctgatctccaagatc
gttccacctacttccctggatgttcctctagtggggaagtacctgatgttcaccatggtt
ctagtcaccttctctatagtcaccagtgtgtgtgtcctcaatgtgcaccatcgttcacct
actacacacaccatgcccccatgggtcaaactggtgttcctgaacaagctcccggccttg
ctcttcatgcgccagccgaggaacagctgcgagcgccagcggttacgtcaaagaaggagg
gcgcaggaacagagagagggtgggatgatgggagtcggcgtggggggtgctggcgggaat
ggagggggggcctccacagcagtgtttggcaaagacgacagtgacccttgcacatgctat
gtgaaccgagcatcagttaagcagtttggaggggatcttggtggtgcaggaggcgggtca
atggatggtttgaacagggtaagggaaggccgggaggggggtgcaggaatactgccccga
ggaaagcaagcagcaggtggtcctgctttgactcaagctctgctggctcaggcctgtcca
ggctttgaggaagcagtggaaggagtacgcttcattgccaaccacatgaagagtgaggac
gatgatcaaagcgtgagcgaggactggaagtatgtcgccatggtgatcgaccgcctcttt
ctgtggatctttgtgtttgtttgtgtgttcggcacactgggcatgttcctgcagcccctc
ttccagaattacacagtaaaaaccatcgcaagtactgcaggctaa
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